RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 C1orf194Q5T5A4 169 aa12.04□□□□□ -0.48
TSPAN4-213ENST00000524895 SSX7Q7RTT5 188 aa12.04□□□□□ -0.48
TSPAN4-213ENST00000524895 OR8I2Q8N0Y5 310 aa12.04□□□□□ -0.48
TSPAN4-213ENST00000524895 LRRC20Q8TCA0 184 aa12.04□□□□□ -0.48
TSPAN4-213ENST00000524895 SLC25A2Q9BXI2 301 aa12.04□□□□□ -0.48
TSPAN4-213ENST00000524895 MAP1LC3BQ9GZQ8 125 aa12.04□□□□□ -0.48
TSPAN4-213ENST00000524895 STAB1Q9NY15 2570 aa12.03□□□□□ -0.48
TSPAN4-213ENST00000524895 CHEK1O14757 476 aa12.03□□□□□ -0.48
TSPAN4-213ENST00000524895 OR7C2O60412 319 aa12.03□□□□□ -0.48
TSPAN4-213ENST00000524895 CSN3P07498 182 aa12.03□□□□□ -0.48
TSPAN4-213ENST00000524895 H2AFB1P0C5Y9 115 aa12.03□□□□□ -0.48
TSPAN4-213ENST00000524895 LCN15Q6UWW0 184 aa12.03□□□□□ -0.48
TSPAN4-213ENST00000524895 BPIFA4PQ86YQ2 179 aa12.03□□□□□ -0.48
TSPAN4-213ENST00000524895 DYNLRB2Q8TF09 96 aa12.03□□□□□ -0.48
TSPAN4-213ENST00000524895 SFT2D1Q8WV19 159 aa12.03□□□□□ -0.48
TSPAN4-213ENST00000524895 STAG3L2P0CL84 134 aa12.02□□□□□ -0.49
TSPAN4-213ENST00000524895 STAG3L3P0CL85 134 aa12.02□□□□□ -0.49
TSPAN4-213ENST00000524895 RPL7P18124 248 aaKnown RBP12.02□□□□□ -0.49
TSPAN4-213ENST00000524895 BLOC1S1P78537 153 aa12.02□□□□□ -0.49
TSPAN4-213ENST00000524895 C16orf54Q6UWD8 224 aa12.02□□□□□ -0.49
TSPAN4-213ENST00000524895 IL34Q6ZMJ4 242 aa12.02□□□□□ -0.49
TSPAN4-213ENST00000524895 IQCF2Q8IXL9 164 aa12.02□□□□□ -0.49
TSPAN4-213ENST00000524895 STXBP6Q8NFX7 210 aa12.02□□□□□ -0.49
TSPAN4-213ENST00000524895 SAT2Q96F10 170 aaPredicted RBP12.02□□□□□ -0.49
TSPAN4-213ENST00000524895 FAM167A-AS1Q96KT0 104 aa12.02□□□□□ -0.49
TSPAN4-213ENST00000524895 GPR82Q96P67 336 aa12.02□□□□□ -0.49
TSPAN4-213ENST00000524895 A0A1B0GV50 99 aa12.01□□□□□ -0.49
TSPAN4-213ENST00000524895 TEX46H3BTG2 121 aa12.01□□□□□ -0.49
TSPAN4-213ENST00000524895 SAP30O75446 220 aa12.01□□□□□ -0.49
TSPAN4-213ENST00000524895 CXorf1O96002 111 aa12.01□□□□□ -0.49
TSPAN4-213ENST00000524895 ARL14EPLP0DKL9 152 aa12.01□□□□□ -0.49
TSPAN4-213ENST00000524895 GALR1P47211 349 aa12.01□□□□□ -0.49
TSPAN4-213ENST00000524895 FGF8P55075 233 aaPredicted RBP12.01□□□□□ -0.49
TSPAN4-213ENST00000524895 RAB14P61106 215 aa12.01□□□□□ -0.49
TSPAN4-213ENST00000524895 UBE2L3P68036 154 aaKnown RBP12.01□□□□□ -0.49
TSPAN4-213ENST00000524895 SIGLEC15Q6ZMC9 328 aa12.01□□□□□ -0.49
TSPAN4-213ENST00000524895 ADAMTSL5Q6ZMM2 481 aa12.01□□□□□ -0.49
TSPAN4-213ENST00000524895 PQLC2Q6ZP29 291 aa12.01□□□□□ -0.49
TSPAN4-213ENST00000524895 GLMPQ8WWB7 406 aa12.01□□□□□ -0.49
TSPAN4-213ENST00000524895 MBD3L1Q8WWY6 194 aa12.01□□□□□ -0.49
TSPAN4-213ENST00000524895 PAXXQ9BUH6 204 aa12.01□□□□□ -0.49
TSPAN4-213ENST00000524895 OR51M1Q9H341 326 aa12.01□□□□□ -0.49
TSPAN4-213ENST00000524895 HELTA6NFD8 242 aa12□□□□□ -0.49
TSPAN4-213ENST00000524895 HBE1P02100 147 aa12□□□□□ -0.49
TSPAN4-213ENST00000524895 PYYP10082 97 aa12□□□□□ -0.49
TSPAN4-213ENST00000524895 GP9P14770 177 aa12□□□□□ -0.49
TSPAN4-213ENST00000524895 ATF4P18848 351 aaPredicted RBP12□□□□□ -0.49
TSPAN4-213ENST00000524895 CD33P20138 364 aa12□□□□□ -0.49
TSPAN4-213ENST00000524895 PCNPQ8WW12 178 aaKnown RBP12□□□□□ -0.49
TSPAN4-213ENST00000524895 SIGLEC8Q9NYZ4 499 aa12□□□□□ -0.49
TSPAN4-213ENST00000524895 TMEM14CQ9P0S9 112 aa12□□□□□ -0.49
TSPAN4-213ENST00000524895 MLXQ9UH92 298 aa12□□□□□ -0.49
TSPAN4-213ENST00000524895 SELENOKQ9Y6D0 94 aa12□□□□□ -0.49
TSPAN4-213ENST00000524895 RGS13O14921 159 aa11.99□□□□□ -0.49
TSPAN4-213ENST00000524895 OR10J4P0C629 311 aa11.99□□□□□ -0.49
TSPAN4-213ENST00000524895 RPL11P62913 178 aaKnown RBP11.99□□□□□ -0.49
TSPAN4-213ENST00000524895 TCF24Q7RTU0 167 aa11.99□□□□□ -0.49
TSPAN4-213ENST00000524895 TRAV1-1A0A0B4J248 108 aa11.98□□□□□ -0.49
TSPAN4-213ENST00000524895 CD5P06127 495 aa11.98□□□□□ -0.49
TSPAN4-213ENST00000524895 NMBP08949 121 aa11.98□□□□□ -0.49
TSPAN4-213ENST00000524895 GCHFRP30047 84 aa11.98□□□□□ -0.49
TSPAN4-213ENST00000524895 KRTAP21-3Q3LHN1 58 aa11.98□□□□□ -0.49
TSPAN4-213ENST00000524895 ZNF503Q96F45 646 aa11.98□□□□□ -0.49
TSPAN4-213ENST00000524895 HRH4Q9H3N8 390 aa11.98□□□□□ -0.49
TSPAN4-213ENST00000524895 WNK1Q9H4A3 2382 aa11.97□□□□□ -0.49
TSPAN4-213ENST00000524895 ZNF785A8K8V0 405 aa11.97□□□□□ -0.49
TSPAN4-213ENST00000524895 MRPS12O15235 138 aaKnown RBP11.97□□□□□ -0.49
TSPAN4-213ENST00000524895 SNRPCP09234 159 aaKnown RBP11.97□□□□□ -0.49
TSPAN4-213ENST00000524895 IGLC2P0DOY2 106 aa11.97□□□□□ -0.49
TSPAN4-213ENST00000524895 SPATA3Q8NHX4 192 aa11.97□□□□□ -0.49
TSPAN4-213ENST00000524895 FXYD5Q96DB9 178 aa11.97□□□□□ -0.49
TSPAN4-213ENST00000524895 MCRIP2Q9BUT9 160 aaKnown RBP11.97□□□□□ -0.49
TSPAN4-213ENST00000524895 TMPRSS5Q9H3S3 457 aa11.97□□□□□ -0.49
TSPAN4-213ENST00000524895 TMEM167BQ9NRX6 74 aa11.97□□□□□ -0.49
TSPAN4-213ENST00000524895 IGKV3-7A0A075B6H7 116 aa11.96□□□□□ -0.49
TSPAN4-213ENST00000524895 HIST1H1EP10412 219 aaKnown RBP11.96□□□□□ -0.49
TSPAN4-213ENST00000524895 GUK1Q16774 197 aa11.96□□□□□ -0.49
TSPAN4-213ENST00000524895 DEFB114Q30KQ6 69 aa11.96□□□□□ -0.49
TSPAN4-213ENST00000524895 CLLU1Q5K131 121 aa11.96□□□□□ -0.49
TSPAN4-213ENST00000524895 C9orf66Q5T8R8 295 aa11.96□□□□□ -0.49
TSPAN4-213ENST00000524895 RBPMS2Q6ZRY4 209 aaKnown RBP11.96□□□□□ -0.49
TSPAN4-213ENST00000524895 WFDC9Q8NEX5 89 aa11.96□□□□□ -0.49
TSPAN4-213ENST00000524895 BLNKQ8WV28 456 aa11.96□□□□□ -0.49
TSPAN4-213ENST00000524895 SMAD5-AS1Q9Y6J3 95 aa11.96□□□□□ -0.49
TSPAN4-213ENST00000524895 ANK2Q01484 3957 aa11.96□□□□□ -0.5
TSPAN4-213ENST00000524895 VWFP04275 2813 aa11.96□□□□□ -0.5
TSPAN4-213ENST00000524895 A0A087X0K7 114 aa11.95□□□□□ -0.5
TSPAN4-213ENST00000524895 H3BQ15 152 aa11.95□□□□□ -0.5
TSPAN4-213ENST00000524895 H3BTX0 84 aa11.95□□□□□ -0.5
TSPAN4-213ENST00000524895 NBEAP1P0C6P0 100 aa11.95□□□□□ -0.5
TSPAN4-213ENST00000524895 PSMB3P49720 205 aa11.95□□□□□ -0.5
TSPAN4-213ENST00000524895 MEOX2P50222 304 aa11.95□□□□□ -0.5
TSPAN4-213ENST00000524895 CD300EQ496F6 205 aaPredicted RBP11.95□□□□□ -0.5
TSPAN4-213ENST00000524895 FAM90A2PQ658T7 463 aa11.95□□□□□ -0.5
TSPAN4-213ENST00000524895 TMEM61Q8N0U2 210 aa11.95□□□□□ -0.5
TSPAN4-213ENST00000524895 NRN1Q9NPD7 142 aa11.95□□□□□ -0.5
TSPAN4-213ENST00000524895 ZNF586Q9NXT0 402 aa11.95□□□□□ -0.5
TSPAN4-213ENST00000524895 TRBV19A0A075B6N1 114 aa11.94□□□□□ -0.5
TSPAN4-213ENST00000524895 IGLV1-51P01701 117 aa11.94□□□□□ -0.5
TSPAN4-213ENST00000524895 PPT1P50897 306 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms