RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 HIGD1AQ9Y241 93 aa5.52□□□□□ -1.53
VPS11-201ENST00000524454 TRBV7-1A0A0A6YYK4 115 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 WI2-2373I1.2A0A1W2PRP0 233 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 A6NDX4 124 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 FBLL1A6NHQ2 334 aaKnown RBP5.51□□□□□ -1.53
VPS11-201ENST00000524454 GNG7O60262 68 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 IGHG2P01859 326 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 OR10J4P0C629 311 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 EGR2P11161 476 aaPredicted RBP5.51□□□□□ -1.53
VPS11-201ENST00000524454 PSG1P11464 419 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 GP9P14770 177 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 MYCNOSP40205 109 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 MEOX2P50222 304 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 RPL23P62829 140 aaKnown RBP5.51□□□□□ -1.53
VPS11-201ENST00000524454 ZNF90Q03938 601 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 MLANAQ16655 118 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 CST9LP1Q5W188 147 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 TMEM88Q6PEY1 159 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 PATE2Q6UY27 113 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 LINC00305Q7Z4B0 112 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 LINC01551Q86U37 167 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 IQCF2Q8IXL9 164 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 LINC01006Q8NI28 216 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 C2CD4CQ8TF44 421 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 ZNF503Q96F45 646 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 PAXXQ9BUH6 204 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 OR51M1Q9H341 326 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 C21orf62Q9NYP8 219 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 MRPL36Q9P0J6 103 aaKnown RBP5.51□□□□□ -1.53
VPS11-201ENST00000524454 RNF114Q9Y508 228 aa5.51□□□□□ -1.53
VPS11-201ENST00000524454 YTHDF2Q9Y5A9 579 aaKnown RBP5.51□□□□□ -1.53
VPS11-201ENST00000524454 TRBV6-1A0A0K0K1D8 114 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 SERTM2A0A1B0GWG4 89 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 CLPSL1A2RUU4 121 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 GGTLC3B5MD39 225 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 H3BRN7 92 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 ZNF253O75346 499 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 NDUFB4O95168 129 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 NDUFA7O95182 113 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 NPPCP23582 126 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 S100PP25815 95 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 ATP5G3P48201 142 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 CEBPGP53567 150 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 SPATA31B1PQ5VZV4 182 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 ZNF600Q6ZNG1 722 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 BPIFA4PQ86YQ2 179 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 ZNF491Q8N8L2 437 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 C11orf44Q8N8P7 122 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 Q8WTZ3 238 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 FXYD5Q96DB9 178 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 RNF125Q96EQ8 232 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 USMG5Q96IX5 58 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 GPR82Q96P67 336 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 PYGO2Q9BRQ0 406 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 SHANK2-AS3Q9BTD1 123 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 KLF12Q9Y4X4 402 aa5.5□□□□□ -1.53
VPS11-201ENST00000524454 TRAV41A0A0B4J266 112 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 SH2D7A6NKC9 451 aaPredicted RBP5.49□□□□□ -1.53
VPS11-201ENST00000524454 H7BYZ3 331 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 AP4M1O00189 453 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 BMPR1BO00238 502 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 ATP6V0E1O15342 81 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 NUPL2O15504 423 aaKnown RBP5.49□□□□□ -1.53
VPS11-201ENST00000524454 HIST1H1EP10412 219 aaKnown RBP5.49□□□□□ -1.53
VPS11-201ENST00000524454 RAB5AP20339 215 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 GATA2P23769 480 aaPredicted RBP5.49□□□□□ -1.53
VPS11-201ENST00000524454 PROK1P58294 105 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 UBE2G2P60604 165 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 RAB5BP61020 215 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 RELQ04864 619 aaPredicted RBP5.49□□□□□ -1.53
VPS11-201ENST00000524454 ELOBQ15370 118 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 ADIRFQ15847 76 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 TMEM95Q3KNT9 176 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 TIGITQ495A1 244 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 C1orf194Q5T5A4 169 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 KCNIP4Q6PIL6 250 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 UNQ5815/PRO19632Q6UWF5 114 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.49□□□□□ -1.53
VPS11-201ENST00000524454 C5orf17Q8NAS9 161 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 OR1B1Q8NGR6 318 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 ZNF502Q8TBZ5 544 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 ISOC2Q96AB3 205 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 EEF1AKMT3Q96AZ1 226 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 OR5B12Q96R08 314 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 HSPB9Q9BQS6 159 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 CHRDL1Q9BU40 450 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 SLC25A39Q9BZJ4 359 aaPredicted RBP5.49□□□□□ -1.53
VPS11-201ENST00000524454 BIN3Q9NQY0 253 aa5.49□□□□□ -1.53
VPS11-201ENST00000524454 FBN3Q75N90 2809 aa5.48□□□□□ -1.53
VPS11-201ENST00000524454 TRBV20OR9-2A0A075B6H5 130 aa5.48□□□□□ -1.53
VPS11-201ENST00000524454 HELTA6NFD8 242 aa5.48□□□□□ -1.53
VPS11-201ENST00000524454 C1orf196B1AJZ1 125 aa5.48□□□□□ -1.53
VPS11-201ENST00000524454 GGCTO75223 188 aaKnown RBP5.48□□□□□ -1.53
VPS11-201ENST00000524454 AMY1AP04745 511 aa5.48□□□□□ -1.53
VPS11-201ENST00000524454 TYMSP04818 313 aa5.48□□□□□ -1.53
VPS11-201ENST00000524454 CTSGP08311 255 aa5.48□□□□□ -1.53
VPS11-201ENST00000524454 NBEAP1P0C6P0 100 aa5.48□□□□□ -1.53
VPS11-201ENST00000524454 IGLC2P0DOY2 106 aa5.48□□□□□ -1.53
VPS11-201ENST00000524454 RPL7P18124 248 aaKnown RBP5.48□□□□□ -1.53
VPS11-201ENST00000524454 ATF4P18848 351 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms