RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 ZNF343Q6P1L6 599 aa7.76□□□□□ -1.17
VPS13B-212ENST00000524330 TEX38Q6PEX7 206 aa7.76□□□□□ -1.17
VPS13B-212ENST00000524330 TOMM20LQ6UXN7 152 aa7.76□□□□□ -1.17
VPS13B-212ENST00000524330 ISOC2Q96AB3 205 aa7.76□□□□□ -1.17
VPS13B-212ENST00000524330 LINC00527Q9UJ94 153 aa7.76□□□□□ -1.17
VPS13B-212ENST00000524330 SOX21Q9Y651 276 aaPredicted RBP7.76□□□□□ -1.17
VPS13B-212ENST00000524330 TRBV19A0A075B6N1 114 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 TRAV9-1A0A075B6T8 112 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 COLCA2A8K830 154 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 CRYBA1P05813 215 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 FOLR2P14207 255 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 RAB5AP20339 215 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 ADMP35318 185 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 RPL15P61313 204 aaKnown RBP7.75□□□□□ -1.17
VPS13B-212ENST00000524330 FOXE3Q13461 319 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 TMEM183BQ1AE95 376 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 FAM106AQ4KMX7 169 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 CENPWQ5EE01 88 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 LEMD1Q68G75 181 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 BAGE2Q86Y30 109 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 FAM24BQ8N5W8 94 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 SIGLECL1Q8N7X8 197 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 OR4X2Q8NGF9 303 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 C2CD4CQ8TF44 421 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 SFRP2Q96HF1 295 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 CCDC140Q96MF4 163 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 SLC50A1Q9BRV3 221 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 TMEM160Q9NX00 188 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 DOPEY2Q9Y3R5 2298 aa7.75□□□□□ -1.17
VPS13B-212ENST00000524330 TRBV6-1A0A0K0K1D8 114 aa7.74□□□□□ -1.17
VPS13B-212ENST00000524330 IGLC2P0DOY2 106 aa7.74□□□□□ -1.17
VPS13B-212ENST00000524330 MGST1P10620 155 aaKnown RBP7.74□□□□□ -1.17
VPS13B-212ENST00000524330 MYCNOSP40205 109 aa7.74□□□□□ -1.17
VPS13B-212ENST00000524330 ERVFC1-1P60608 527 aa7.74□□□□□ -1.17
VPS13B-212ENST00000524330 FLI1Q01543 452 aaPredicted RBP7.74□□□□□ -1.17
VPS13B-212ENST00000524330 SAMD13Q5VXD3 122 aa7.74□□□□□ -1.17
VPS13B-212ENST00000524330 OCC1Q8TAD7 63 aa7.74□□□□□ -1.17
VPS13B-212ENST00000524330 ZNF418Q8TF45 676 aaPredicted RBP7.74□□□□□ -1.17
VPS13B-212ENST00000524330 ZNF414Q96IQ9 312 aa7.74□□□□□ -1.17
VPS13B-212ENST00000524330 NOL4LQ96MY1 436 aaPredicted RBP7.74□□□□□ -1.17
VPS13B-212ENST00000524330 JMJD8Q96S16 334 aa7.74□□□□□ -1.17
VPS13B-212ENST00000524330 DERL1Q9BUN8 251 aa7.74□□□□□ -1.17
VPS13B-212ENST00000524330 ZFAND3Q9H8U3 227 aa7.74□□□□□ -1.17
VPS13B-212ENST00000524330 OSTCQ9NRP0 149 aa7.74□□□□□ -1.17
VPS13B-212ENST00000524330 ZNF586Q9NXT0 402 aa7.74□□□□□ -1.17
VPS13B-212ENST00000524330 PEF1Q9UBV8 284 aaKnown RBP7.74□□□□□ -1.17
VPS13B-212ENST00000524330 TRBV24-1A0A075B6N3 115 aa7.73□□□□□ -1.17
VPS13B-212ENST00000524330 A0A087X0K7 114 aa7.73□□□□□ -1.17
VPS13B-212ENST00000524330 ISLRO14498 428 aa7.73□□□□□ -1.17
VPS13B-212ENST00000524330 GCGP01275 180 aa7.73□□□□□ -1.17
VPS13B-212ENST00000524330 TCRAP04437 139 aa7.73□□□□□ -1.17
VPS13B-212ENST00000524330 RPS10P46783 165 aaKnown RBP7.73□□□□□ -1.17
VPS13B-212ENST00000524330 CFHR3Q02985 330 aa7.73□□□□□ -1.17
VPS13B-212ENST00000524330 DAZAP1Q96EP5 407 aaKnown RBP7.73□□□□□ -1.17
VPS13B-212ENST00000524330 FAM210BQ96KR6 192 aa7.73□□□□□ -1.17
VPS13B-212ENST00000524330 RPH3ALQ9UNE2 315 aa7.73□□□□□ -1.17
VPS13B-212ENST00000524330 ZFP30Q9Y2G7 519 aa7.73□□□□□ -1.17
VPS13B-212ENST00000524330 UFC1Q9Y3C8 167 aa7.73□□□□□ -1.17
VPS13B-212ENST00000524330 KLF12Q9Y4X4 402 aa7.73□□□□□ -1.17
VPS13B-212ENST00000524330 PPP5D1E7EU14 171 aa7.72□□□□□ -1.17
VPS13B-212ENST00000524330 K7EMT4 169 aa7.72□□□□□ -1.17
VPS13B-212ENST00000524330 BUB3O43684 328 aa7.72□□□□□ -1.17
VPS13B-212ENST00000524330 S100A6P06703 90 aa7.72□□□□□ -1.17
VPS13B-212ENST00000524330 PSMB8P28062 276 aa7.72□□□□□ -1.17
VPS13B-212ENST00000524330 FOXL1Q12952 345 aa7.72□□□□□ -1.17
VPS13B-212ENST00000524330 ELOBQ15370 118 aa7.72□□□□□ -1.17
VPS13B-212ENST00000524330 RPEL1Q2QD12 228 aa7.72□□□□□ -1.17
VPS13B-212ENST00000524330 COX19Q49B96 90 aa7.72□□□□□ -1.17
VPS13B-212ENST00000524330 C1QL4Q86Z23 238 aa7.72□□□□□ -1.17
VPS13B-212ENST00000524330 Q8N2B8 174 aa7.72□□□□□ -1.17
VPS13B-212ENST00000524330 TMEM75Q8N9X5 138 aa7.72□□□□□ -1.17
VPS13B-212ENST00000524330 NDFIP1Q9BT67 221 aa7.72□□□□□ -1.17
VPS13B-212ENST00000524330 URGCP-MRPS24S4R325 110 aa7.72□□□□□ -1.17
VPS13B-212ENST00000524330 USP9YO00507 2555 aaPredicted RBP7.72□□□□□ -1.17
VPS13B-212ENST00000524330 NAV2Q8IVL1 2488 aa7.72□□□□□ -1.17
VPS13B-212ENST00000524330 MRPS12O15235 138 aaKnown RBP7.71□□□□□ -1.18
VPS13B-212ENST00000524330 GATCO43716 136 aaKnown RBP7.71□□□□□ -1.18
VPS13B-212ENST00000524330 IGHV3-11P01762 117 aa7.71□□□□□ -1.18
VPS13B-212ENST00000524330 CT45A10P0DMU9 189 aa7.71□□□□□ -1.18
VPS13B-212ENST00000524330 SAPCD1Q5SSQ6 148 aa7.71□□□□□ -1.18
VPS13B-212ENST00000524330 IBA57Q5T440 356 aaKnown RBP7.71□□□□□ -1.18
VPS13B-212ENST00000524330 SIGLEC15Q6ZMC9 328 aa7.71□□□□□ -1.18
VPS13B-212ENST00000524330 FAM231DQ6ZW35 169 aa7.71□□□□□ -1.18
VPS13B-212ENST00000524330 GPHB5Q86YW7 130 aa7.71□□□□□ -1.18
VPS13B-212ENST00000524330 CIARTQ8N365 385 aaPredicted RBP7.71□□□□□ -1.18
VPS13B-212ENST00000524330 MRPL53Q96EL3 112 aaKnown RBP7.71□□□□□ -1.18
VPS13B-212ENST00000524330 IGF2BP2-AS1Q96M15 143 aa7.71□□□□□ -1.18
VPS13B-212ENST00000524330 ZNF702PQ9H963 129 aa7.71□□□□□ -1.18
VPS13B-212ENST00000524330 SERTAD4Q9NUC0 356 aa7.71□□□□□ -1.18
VPS13B-212ENST00000524330 IL36BQ9NZH7 164 aa7.71□□□□□ -1.18
VPS13B-212ENST00000524330 U3KQE9 123 aa7.71□□□□□ -1.18
VPS13B-212ENST00000524330 DCHS2Q6V1P9 2916 aa7.7□□□□□ -1.18
VPS13B-212ENST00000524330 IGHV3-35A0A0C4DH35 117 aa7.7□□□□□ -1.18
VPS13B-212ENST00000524330 ZNF320A2RRD8 509 aa7.7□□□□□ -1.18
VPS13B-212ENST00000524330 ZNF705GA8MUZ8 300 aaPredicted RBP7.7□□□□□ -1.18
VPS13B-212ENST00000524330 H3BTX0 84 aa7.7□□□□□ -1.18
VPS13B-212ENST00000524330 M0QZ24 198 aa7.7□□□□□ -1.18
VPS13B-212ENST00000524330 PFN1P07737 140 aaKnown RBP7.7□□□□□ -1.18
VPS13B-212ENST00000524330 LGALS1P09382 135 aaKnown RBP7.7□□□□□ -1.18
VPS13B-212ENST00000524330 FAM3BP58499 235 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms