RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 HLA-DMAP28067 261 aa11.66□□□□□ -0.54
PVT1-220ENST00000524165 NMSQ5H8A3 153 aa11.66□□□□□ -0.54
PVT1-220ENST00000524165 OR1B1Q8NGR6 318 aa11.66□□□□□ -0.54
PVT1-220ENST00000524165 ZNF486Q96H40 463 aaPredicted RBP11.66□□□□□ -0.54
PVT1-220ENST00000524165 GPR82Q96P67 336 aa11.66□□□□□ -0.54
PVT1-220ENST00000524165 SLC25A22Q9H936 323 aa11.66□□□□□ -0.54
PVT1-220ENST00000524165 C3orf85A0A1B0GTC6 90 aa11.65□□□□□ -0.54
PVT1-220ENST00000524165 PAX4O43316 350 aa11.65□□□□□ -0.54
PVT1-220ENST00000524165 TRIM16LQ309B1 348 aa11.65□□□□□ -0.54
PVT1-220ENST00000524165 SCXQ7RTU7 201 aa11.65□□□□□ -0.54
PVT1-220ENST00000524165 FAM219AQ8IW50 185 aa11.65□□□□□ -0.54
PVT1-220ENST00000524165 RNASE11Q8TAA1 199 aaKnown RBP11.65□□□□□ -0.54
PVT1-220ENST00000524165 SLC45A2Q9UMX9 530 aa11.65□□□□□ -0.54
PVT1-220ENST00000524165 TRGV2A0A075B6R0 118 aa11.64□□□□□ -0.55
PVT1-220ENST00000524165 CEBPZOSA8MTT3 80 aa11.64□□□□□ -0.55
PVT1-220ENST00000524165 WFDC10BQ8IUB3 73 aa11.64□□□□□ -0.55
PVT1-220ENST00000524165 LRTM2Q8N967 370 aa11.64□□□□□ -0.55
PVT1-220ENST00000524165 CRYGDP07320 174 aa11.63□□□□□ -0.55
PVT1-220ENST00000524165 MT1HL1P0DM35 61 aa11.63□□□□□ -0.55
PVT1-220ENST00000524165 PGAM2P15259 253 aa11.63□□□□□ -0.55
PVT1-220ENST00000524165 SDC2P34741 201 aa11.63□□□□□ -0.55
PVT1-220ENST00000524165 ASIPP42127 132 aa11.63□□□□□ -0.55
PVT1-220ENST00000524165 PIGPP57054 158 aa11.63□□□□□ -0.55
PVT1-220ENST00000524165 MRPL23Q16540 153 aaKnown RBP11.63□□□□□ -0.55
PVT1-220ENST00000524165 PSG3Q16557 428 aa11.63□□□□□ -0.55
PVT1-220ENST00000524165 NEGR1Q7Z3B1 354 aa11.63□□□□□ -0.55
PVT1-220ENST00000524165 S100A16Q96FQ6 103 aaKnown RBP11.63□□□□□ -0.55
PVT1-220ENST00000524165 TRAV5A0A0B4J249 113 aa11.62□□□□□ -0.55
PVT1-220ENST00000524165 GABARAPH6UMI1 98 aa11.62□□□□□ -0.55
PVT1-220ENST00000524165 GABARAPO95166 117 aa11.62□□□□□ -0.55
PVT1-220ENST00000524165 OR2F1Q13607 317 aa11.62□□□□□ -0.55
PVT1-220ENST00000524165 TNXBP22105 4242 aa11.61□□□□□ -0.55
PVT1-220ENST00000524165 CFDP00746 253 aaPredicted RBP11.61□□□□□ -0.55
PVT1-220ENST00000524165 PI3P19957 117 aa11.61□□□□□ -0.55
PVT1-220ENST00000524165 PRSS3P35030 304 aa11.61□□□□□ -0.55
PVT1-220ENST00000524165 RCVRNP35243 200 aa11.61□□□□□ -0.55
PVT1-220ENST00000524165 GPX4P36969 197 aaPredicted RBP11.61□□□□□ -0.55
PVT1-220ENST00000524165 MXD1Q05195 221 aa11.61□□□□□ -0.55
PVT1-220ENST00000524165 SP6Q3SY56 376 aa11.61□□□□□ -0.55
PVT1-220ENST00000524165 ARRDC1Q8N5I2 433 aa11.61□□□□□ -0.55
PVT1-220ENST00000524165 SLC35E1Q96K37 410 aa11.61□□□□□ -0.55
PVT1-220ENST00000524165 TRGV9Q99603 122 aa11.61□□□□□ -0.55
PVT1-220ENST00000524165 VCXQ9H320 206 aa11.61□□□□□ -0.55
PVT1-220ENST00000524165 PRO0255Q9UI72 69 aa11.61□□□□□ -0.55
PVT1-220ENST00000524165 U3KQ87 197 aa11.61□□□□□ -0.55
PVT1-220ENST00000524165 B3GALNT1O75752 331 aa11.6□□□□□ -0.55
PVT1-220ENST00000524165 CLEC2LP0C7M8 214 aa11.6□□□□□ -0.55
PVT1-220ENST00000524165 FGL1Q08830 312 aa11.6□□□□□ -0.55
PVT1-220ENST00000524165 SLAQ13239 276 aa11.6□□□□□ -0.55
PVT1-220ENST00000524165 KIR3DS1Q14943 382 aa11.6□□□□□ -0.55
PVT1-220ENST00000524165 CACNG5Q9UF02 275 aa11.6□□□□□ -0.55
PVT1-220ENST00000524165 CACFD1Q9UGQ2 172 aa11.6□□□□□ -0.55
PVT1-220ENST00000524165 SSR3Q9UNL2 185 aa11.6□□□□□ -0.55
PVT1-220ENST00000524165 FUT9Q9Y231 359 aa11.6□□□□□ -0.55
PVT1-220ENST00000524165 TMEM127O75204 238 aa11.59□□□□□ -0.55
PVT1-220ENST00000524165 CXCL3P19876 107 aa11.59□□□□□ -0.55
PVT1-220ENST00000524165 S100A7P31151 101 aa11.59□□□□□ -0.55
PVT1-220ENST00000524165 GFI1BQ5VTD9 330 aa11.59□□□□□ -0.55
PVT1-220ENST00000524165 GGNBP1Q5YKI7 109 aa11.59□□□□□ -0.55
PVT1-220ENST00000524165 CHAC1Q9BUX1 264 aa11.59□□□□□ -0.55
PVT1-220ENST00000524165 KRTAP9-2Q9BYQ4 174 aa11.59□□□□□ -0.55
PVT1-220ENST00000524165 CDS2O95674 445 aa11.58□□□□□ -0.56
PVT1-220ENST00000524165 CRYBA4P53673 196 aa11.58□□□□□ -0.56
PVT1-220ENST00000524165 ASAH1Q13510 395 aa11.58□□□□□ -0.56
PVT1-220ENST00000524165 RCL1Q9Y2P8 373 aaKnown RBP11.58□□□□□ -0.56
PVT1-220ENST00000524165 LGI3Q8N145 548 aa11.57□□□□□ -0.56
PVT1-220ENST00000524165 GPX8Q8TED1 209 aa11.57□□□□□ -0.56
PVT1-220ENST00000524165 IL22RA2Q969J5 263 aa11.57□□□□□ -0.56
PVT1-220ENST00000524165 ST6GAL2Q96JF0 529 aa11.57□□□□□ -0.56
PVT1-220ENST00000524165 PYGO2Q9BRQ0 406 aa11.57□□□□□ -0.56
PVT1-220ENST00000524165 COPZ2Q9P299 210 aa11.57□□□□□ -0.56
PVT1-220ENST00000524165 TMEM56-RWDD3S4R434 201 aa11.57□□□□□ -0.56
PVT1-220ENST00000524165 IGKV1OR2-108A0A075B7D4 117 aa11.56□□□□□ -0.56
PVT1-220ENST00000524165 TRGV1A0A0A0MS02 117 aa11.56□□□□□ -0.56
PVT1-220ENST00000524165 PRAF2O60831 178 aa11.56□□□□□ -0.56
PVT1-220ENST00000524165 ATP5IP56385 69 aaPredicted RBP11.56□□□□□ -0.56
PVT1-220ENST00000524165 UBE2NLQ5JXB2 153 aa11.56□□□□□ -0.56
PVT1-220ENST00000524165 CCDC71LQ8N9Z2 235 aa11.56□□□□□ -0.56
PVT1-220ENST00000524165 THAP8Q8NA92 274 aa11.56□□□□□ -0.56
PVT1-220ENST00000524165 RPUSD4Q96CM3 377 aaKnown RBP11.56□□□□□ -0.56
PVT1-220ENST00000524165 TMEM222Q9H0R3 208 aa11.56□□□□□ -0.56
PVT1-220ENST00000524165 HHLA3Q9XRX5 114 aa11.56□□□□□ -0.56
PVT1-220ENST00000524165 IBA57-AS1B1ANH7 110 aa11.55□□□□□ -0.56
PVT1-220ENST00000524165 IGLV2-8P01709 118 aa11.55□□□□□ -0.56
PVT1-220ENST00000524165 ACOT6Q3I5F7 207 aaPredicted RBP11.55□□□□□ -0.56
PVT1-220ENST00000524165 GPR107Q5VW38 600 aa11.55□□□□□ -0.56
PVT1-220ENST00000524165 STEAP1BQ6NZ63 245 aa11.55□□□□□ -0.56
PVT1-220ENST00000524165 LHFPL1Q86WI0 220 aa11.55□□□□□ -0.56
PVT1-220ENST00000524165 C11orf72Q8NBR9 251 aa11.55□□□□□ -0.56
PVT1-220ENST00000524165 ZNF680Q8NEM1 530 aa11.55□□□□□ -0.56
PVT1-220ENST00000524165 CIRBP-AS1Q8TBR5 109 aa11.55□□□□□ -0.56
PVT1-220ENST00000524165 RBPMSQ93062 196 aaKnown RBP11.55□□□□□ -0.56
PVT1-220ENST00000524165 TMEM147Q9BVK8 224 aa11.55□□□□□ -0.56
PVT1-220ENST00000524165 GSN-AS1Q9NRJ2 163 aa11.55□□□□□ -0.56
PVT1-220ENST00000524165 ORM2P19652 201 aa11.54□□□□□ -0.56
PVT1-220ENST00000524165 SRIP30626 198 aa11.54□□□□□ -0.56
PVT1-220ENST00000524165 TDRG1Q3Y452 100 aa11.54□□□□□ -0.56
PVT1-220ENST00000524165 LHFPL5Q8TAF8 219 aa11.54□□□□□ -0.56
PVT1-220ENST00000524165 A0A087X0K7 114 aa11.53□□□□□ -0.56
PVT1-220ENST00000524165 SPINK4O60575 86 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms