RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 PSG8Q9UQ74 426 aa6.73□□□□□ -1.33
CSMD1-213ENST00000523488 IGLV2-11P01706 119 aa6.73□□□□□ -1.33
CSMD1-213ENST00000523488 EVI2AP22794 236 aa6.73□□□□□ -1.33
CSMD1-213ENST00000523488 C10orf113Q5VZT2 155 aa6.73□□□□□ -1.33
CSMD1-213ENST00000523488 GUSBP11Q6P575 273 aa6.73□□□□□ -1.33
CSMD1-213ENST00000523488 INO80CQ6PI98 192 aaPredicted RBP6.73□□□□□ -1.33
CSMD1-213ENST00000523488 ZNF71Q9NQZ8 489 aaPredicted RBP6.73□□□□□ -1.33
CSMD1-213ENST00000523488 UFC1Q9Y3C8 167 aa6.73□□□□□ -1.33
CSMD1-213ENST00000523488 CHD9Q3L8U1 2897 aa6.73□□□□□ -1.33
CSMD1-213ENST00000523488 DNAH14Q0VDD8 3507 aa6.73□□□□□ -1.33
CSMD1-213ENST00000523488 IGHV1OR15-9A0A0B4J2B8 117 aa6.73□□□□□ -1.33
CSMD1-213ENST00000523488 NKX2-8O15522 239 aa6.73□□□□□ -1.33
CSMD1-213ENST00000523488 PLAUP00749 431 aa6.73□□□□□ -1.33
CSMD1-213ENST00000523488 PPIFP30405 207 aaKnown RBP6.73□□□□□ -1.33
CSMD1-213ENST00000523488 ZNF575Q86XF7 245 aa6.73□□□□□ -1.33
CSMD1-213ENST00000523488 AKIRIN1Q9H9L7 192 aaPredicted RBP6.73□□□□□ -1.33
CSMD1-213ENST00000523488 HHLA3Q9XRX5 114 aa6.73□□□□□ -1.33
CSMD1-213ENST00000523488 IGHV1OR21-1A0A087WYE8 117 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 ZNF503-AS2A6NEH8 195 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 PRSS1P07477 247 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 ACP1P24666 158 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 LOXL3P58215 753 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 FXYD7P58549 80 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 MOB3BQ86TA1 216 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 CXorf67Q86X51 503 aaPredicted RBP6.72□□□□□ -1.33
CSMD1-213ENST00000523488 WFDC3Q8IUB2 231 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 SMIM20Q8N5G0 67 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 TEX29Q8N6K0 151 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 OR1L4Q8NGR5 311 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 CHAC1Q9BUX1 264 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 SPANXA1Q9NS26 97 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 REV3LO60673 3130 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 A0A1B0GUT8 65 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 MT-CO3P00414 261 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 Q6Q795 121 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 FAM169BQ8N8A8 192 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 CACNG8Q8WXS5 425 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 OBP2BQ9NPH6 170 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 VCANP13611 3396 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 C16orf97H3BN30 126 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 SRD5A1P18405 259 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 INSL3P51460 131 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 SSR4P51571 173 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 ZFAND6Q6FIF0 208 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 IFI27L1Q96BM0 104 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 FLYWCH2Q96CP2 140 aaKnown RBP6.72□□□□□ -1.33
CSMD1-213ENST00000523488 EPDR1Q9UM22 224 aa6.72□□□□□ -1.33
CSMD1-213ENST00000523488 DOCK10Q96BY6 2186 aa6.71□□□□□ -1.33
CSMD1-213ENST00000523488 IGKV1D-37A0A075B6S9 117 aa6.71□□□□□ -1.33
CSMD1-213ENST00000523488 PSPNO60542 156 aa6.71□□□□□ -1.33
CSMD1-213ENST00000523488 GATA3P23771 443 aa6.71□□□□□ -1.33
CSMD1-213ENST00000523488 IFI27P40305 119 aaPredicted RBP6.71□□□□□ -1.33
CSMD1-213ENST00000523488 FMC1Q96HJ9 113 aa6.71□□□□□ -1.33
CSMD1-213ENST00000523488 SRSF8Q9BRL6 282 aaKnown RBP6.71□□□□□ -1.33
CSMD1-213ENST00000523488 FREM1Q5H8C1 2179 aa6.71□□□□□ -1.34
CSMD1-213ENST00000523488 TRBV7-9A0A0J9YWB2 115 aa6.71□□□□□ -1.34
CSMD1-213ENST00000523488 IQCF6A8MYZ5 107 aa6.71□□□□□ -1.34
CSMD1-213ENST00000523488 IGLL5B9A064 214 aa6.71□□□□□ -1.34
CSMD1-213ENST00000523488 LMO7DNF2Z398 122 aa6.71□□□□□ -1.34
CSMD1-213ENST00000523488 MOSP00540 346 aa6.71□□□□□ -1.34
CSMD1-213ENST00000523488 CFHR2P36980 270 aa6.71□□□□□ -1.34
CSMD1-213ENST00000523488 PRCDQ00LT1 54 aa6.71□□□□□ -1.34
CSMD1-213ENST00000523488 RPL39P5Q59GN2 51 aa6.71□□□□□ -1.34
CSMD1-213ENST00000523488 CNFNQ9BYD5 112 aa6.71□□□□□ -1.34
CSMD1-213ENST00000523488 TCRBV4S1A1TA0A5B7 111 aa6.71□□□□□ -1.34
CSMD1-213ENST00000523488 K7EMI3 77 aa6.71□□□□□ -1.34
CSMD1-213ENST00000523488 MT-ATP8P03928 68 aa6.71□□□□□ -1.34
CSMD1-213ENST00000523488 LINC00322Q6ZN03 302 aaPredicted RBP6.71□□□□□ -1.34
CSMD1-213ENST00000523488 TMEM178AQ8NBL3 297 aa6.71□□□□□ -1.34
CSMD1-213ENST00000523488 SRSF12Q8WXF0 261 aaKnown RBP6.71□□□□□ -1.34
CSMD1-213ENST00000523488 HIST1H4GQ99525 98 aa6.71□□□□□ -1.34
CSMD1-213ENST00000523488 ABCA4P78363 2273 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 TNCP24821 2201 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 PIEZO2Q9H5I5 2752 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 SCGB2A1O75556 95 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 HBDP02042 147 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 TNFRSF1AP19438 455 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 ORM2P19652 201 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 FHL3Q13643 280 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 TMEM30BQ3MIR4 351 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 OR5AN1Q8NGI8 311 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 MAFAQ8NHW3 353 aaPredicted RBP6.7□□□□□ -1.34
CSMD1-213ENST00000523488 IFI27L2Q9H2X8 130 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 CELA2AP08217 269 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 MLANAQ16655 118 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 C1orf122Q6ZSJ8 110 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 SLC25A48Q6ZT89 311 aaKnown RBP6.7□□□□□ -1.34
CSMD1-213ENST00000523488 OR13A1Q8NGR1 328 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 RAX2Q96IS3 184 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 DCTN5Q9BTE1 182 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 IGHV1-45A0A0A0MS14 117 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.7□□□□□ -1.34
CSMD1-213ENST00000523488 MYOD1P15172 320 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 MYOZ3Q8TDC0 251 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 PRELID3AQ96N28 172 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 TMEM14CQ9P0S9 112 aa6.7□□□□□ -1.34
CSMD1-213ENST00000523488 LOC107984156A0A0G2JMH3 177 aa6.69□□□□□ -1.34
CSMD1-213ENST00000523488 H3BTX0 84 aa6.69□□□□□ -1.34
CSMD1-213ENST00000523488 NHLRC4P0CG21 123 aaPredicted RBP6.69□□□□□ -1.34
CSMD1-213ENST00000523488 MPV17P39210 176 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms