RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 ASIPP42127 132 aa10.54□□□□□ -0.72
PCDHGB1-201ENST00000523390 WT1-ASQ06250 92 aa10.54□□□□□ -0.72
PCDHGB1-201ENST00000523390 HAPLN4Q86UW8 402 aa10.54□□□□□ -0.72
PCDHGB1-201ENST00000523390 ZNF502Q8TBZ5 544 aa10.54□□□□□ -0.72
PCDHGB1-201ENST00000523390 WFDC12Q8WWY7 111 aa10.54□□□□□ -0.72
PCDHGB1-201ENST00000523390 PRELID3AQ96N28 172 aa10.54□□□□□ -0.72
PCDHGB1-201ENST00000523390 HTTP42858 3142 aa10.53□□□□□ -0.72
PCDHGB1-201ENST00000523390 PRR31Q5SQ13 230 aa10.53□□□□□ -0.72
PCDHGB1-201ENST00000523390 IGFL4Q6B9Z1 124 aa10.53□□□□□ -0.72
PCDHGB1-201ENST00000523390 M0R3E3 92 aa10.53□□□□□ -0.72
PCDHGB1-201ENST00000523390 TDGF1P3P51864 188 aa10.53□□□□□ -0.72
PCDHGB1-201ENST00000523390 HIST3H2BBQ8N257 126 aa10.53□□□□□ -0.72
PCDHGB1-201ENST00000523390 LINC00311Q8N616 119 aa10.53□□□□□ -0.72
PCDHGB1-201ENST00000523390 HIVEP2P31629 2446 aa10.53□□□□□ -0.72
PCDHGB1-201ENST00000523390 NPIPB5A8MRT5 1133 aa10.53□□□□□ -0.72
PCDHGB1-201ENST00000523390 PRB1P04280 392 aa10.53□□□□□ -0.72
PCDHGB1-201ENST00000523390 HERVK_113P61574 105 aa10.53□□□□□ -0.72
PCDHGB1-201ENST00000523390 KCNS1Q96KK3 526 aa10.53□□□□□ -0.72
PCDHGB1-201ENST00000523390 DYSFO75923 2080 aa10.53□□□□□ -0.72
PCDHGB1-201ENST00000523390 IGHV2-70DA0A0C4DH43 119 aa10.53□□□□□ -0.72
PCDHGB1-201ENST00000523390 GZMBP10144 247 aa10.53□□□□□ -0.72
PCDHGB1-201ENST00000523390 ZFP30Q9Y2G7 519 aa10.53□□□□□ -0.72
PCDHGB1-201ENST00000523390 OR4C46A6NHA9 309 aa10.52□□□□□ -0.72
PCDHGB1-201ENST00000523390 G3V318 75 aa10.52□□□□□ -0.72
PCDHGB1-201ENST00000523390 NDUFS8O00217 210 aa10.52□□□□□ -0.72
PCDHGB1-201ENST00000523390 IGFBPL1Q8WX77 278 aa10.52□□□□□ -0.72
PCDHGB1-201ENST00000523390 PSMB11A5LHX3 300 aa10.52□□□□□ -0.73
PCDHGB1-201ENST00000523390 ATP6V0E1O15342 81 aa10.52□□□□□ -0.73
PCDHGB1-201ENST00000523390 TCRAP04437 139 aa10.52□□□□□ -0.73
PCDHGB1-201ENST00000523390 FAM90A2PQ658T7 463 aa10.52□□□□□ -0.73
PCDHGB1-201ENST00000523390 LINC00479Q96M42 142 aa10.52□□□□□ -0.73
PCDHGB1-201ENST00000523390 C18orf15Q96N68 181 aa10.52□□□□□ -0.73
PCDHGB1-201ENST00000523390 LHBP01229 141 aa10.52□□□□□ -0.73
PCDHGB1-201ENST00000523390 IGHV2-70P01814 119 aa10.52□□□□□ -0.73
PCDHGB1-201ENST00000523390 ADORA2A-AS1P86434 159 aa10.52□□□□□ -0.73
PCDHGB1-201ENST00000523390 SPATA45Q537H7 98 aa10.52□□□□□ -0.73
PCDHGB1-201ENST00000523390 LINC01356Q8N9X3 169 aa10.52□□□□□ -0.73
PCDHGB1-201ENST00000523390 HIST1H2BLQ99880 126 aa10.52□□□□□ -0.73
PCDHGB1-201ENST00000523390 PARD6GQ9BYG4 376 aaPredicted RBP10.52□□□□□ -0.73
PCDHGB1-201ENST00000523390 LURAP1LQ8IV03 231 aa10.51□□□□□ -0.73
PCDHGB1-201ENST00000523390 NUDT10Q8NFP7 164 aa10.51□□□□□ -0.73
PCDHGB1-201ENST00000523390 NUDT11Q96G61 164 aa10.51□□□□□ -0.73
PCDHGB1-201ENST00000523390 SERF1AO75920 110 aa10.51□□□□□ -0.73
PCDHGB1-201ENST00000523390 APOHP02749 345 aaPredicted RBP10.51□□□□□ -0.73
PCDHGB1-201ENST00000523390 ADMP35318 185 aa10.51□□□□□ -0.73
PCDHGB1-201ENST00000523390 LDLRAD2Q5SZI1 272 aa10.51□□□□□ -0.73
PCDHGB1-201ENST00000523390 SIGLEC15Q6ZMC9 328 aa10.51□□□□□ -0.73
PCDHGB1-201ENST00000523390 TRAV9-1A0A075B6T8 112 aa10.51□□□□□ -0.73
PCDHGB1-201ENST00000523390 CBY3A6NI87 242 aa10.51□□□□□ -0.73
PCDHGB1-201ENST00000523390 NDUFB8O95169 186 aa10.51□□□□□ -0.73
PCDHGB1-201ENST00000523390 RNF151Q2KHN1 245 aa10.51□□□□□ -0.73
PCDHGB1-201ENST00000523390 Q5PR19 223 aa10.51□□□□□ -0.73
PCDHGB1-201ENST00000523390 Q8TAT8 98 aa10.51□□□□□ -0.73
PCDHGB1-201ENST00000523390 ASCL2Q99929 193 aa10.51□□□□□ -0.73
PCDHGB1-201ENST00000523390 IGHV1-69DA0A0B4J2H0 117 aa10.5□□□□□ -0.73
PCDHGB1-201ENST00000523390 IGHV1-69P01742 117 aa10.5□□□□□ -0.73
PCDHGB1-201ENST00000523390 IGHV2-5P01817 119 aa10.5□□□□□ -0.73
PCDHGB1-201ENST00000523390 SCGB1C2P0DMR2 95 aa10.5□□□□□ -0.73
PCDHGB1-201ENST00000523390 Q6AWC8 147 aa10.5□□□□□ -0.73
PCDHGB1-201ENST00000523390 TMEM170AQ8WVE7 144 aa10.5□□□□□ -0.73
PCDHGB1-201ENST00000523390 MKI67P46013 3256 aaKnown RBP10.5□□□□□ -0.73
PCDHGB1-201ENST00000523390 TRBV24-1A0A075B6N3 115 aa10.5□□□□□ -0.73
PCDHGB1-201ENST00000523390 FNDC10F2Z333 226 aa10.5□□□□□ -0.73
PCDHGB1-201ENST00000523390 SRSF9Q13242 221 aaKnown RBP eCLIP10.5□□□□□ -0.73
PCDHGB1-201ENST00000523390 PMCHL1Q16048 86 aa10.5□□□□□ -0.73
PCDHGB1-201ENST00000523390 NPIPB6E9PJ23 425 aa10.5□□□□□ -0.73
PCDHGB1-201ENST00000523390 C14orf144Q96I85 54 aa10.5□□□□□ -0.73
PCDHGB1-201ENST00000523390 PEMTQ9UBM1 199 aa10.5□□□□□ -0.73
PCDHGB1-201ENST00000523390 SOX21Q9Y651 276 aaPredicted RBP10.5□□□□□ -0.73
PCDHGB1-201ENST00000523390 DUX3Q96PT4 197 aa10.5□□□□□ -0.73
PCDHGB1-201ENST00000523390 FBLL1A6NHQ2 334 aaKnown RBP10.49□□□□□ -0.73
PCDHGB1-201ENST00000523390 ZNF726P1Q15940 193 aa10.49□□□□□ -0.73
PCDHGB1-201ENST00000523390 NAV3Q8IVL0 2385 aa10.49□□□□□ -0.73
PCDHGB1-201ENST00000523390 ZNF688P0C7X2 276 aa10.49□□□□□ -0.73
PCDHGB1-201ENST00000523390 NUTF2P61970 127 aaKnown RBP10.49□□□□□ -0.73
PCDHGB1-201ENST00000523390 PSMG4Q5JS54 123 aa10.49□□□□□ -0.73
PCDHGB1-201ENST00000523390 CD7P09564 240 aa10.49□□□□□ -0.73
PCDHGB1-201ENST00000523390 TSKUQ8WUA8 353 aa10.48□□□□□ -0.73
PCDHGB1-201ENST00000523390 KIR2DL4Q99706 377 aa10.48□□□□□ -0.73
PCDHGB1-201ENST00000523390 ORMDL3Q8N138 153 aa10.48□□□□□ -0.73
PCDHGB1-201ENST00000523390 BEX4Q9NWD9 120 aaPredicted RBP10.48□□□□□ -0.73
PCDHGB1-201ENST00000523390 TMEM242Q9NWH2 141 aa10.48□□□□□ -0.73
PCDHGB1-201ENST00000523390 PLXNB1O43157 2135 aa10.48□□□□□ -0.73
PCDHGB1-201ENST00000523390 USP9YO00507 2555 aaPredicted RBP10.48□□□□□ -0.73
PCDHGB1-201ENST00000523390 TRBV7-1A0A0A6YYK4 115 aa10.48□□□□□ -0.73
PCDHGB1-201ENST00000523390 TOMM40O96008 361 aa10.48□□□□□ -0.73
PCDHGB1-201ENST00000523390 AMMECR1LQ6DCA0 310 aa10.48□□□□□ -0.73
PCDHGB1-201ENST00000523390 OVOL3O00110 214 aa10.47□□□□□ -0.73
PCDHGB1-201ENST00000523390 OR4C5Q8NGB2 326 aa10.47□□□□□ -0.73
PCDHGB1-201ENST00000523390 LINC01587Q99440 93 aa10.47□□□□□ -0.73
PCDHGB1-201ENST00000523390 SRSF8Q9BRL6 282 aaKnown RBP10.47□□□□□ -0.73
PCDHGB1-201ENST00000523390 C7orf71A4D174 169 aa10.47□□□□□ -0.73
PCDHGB1-201ENST00000523390 AMBPP02760 352 aa10.47□□□□□ -0.73
PCDHGB1-201ENST00000523390 DMRTC2Q8IXT2 367 aaPredicted RBP10.47□□□□□ -0.73
PCDHGB1-201ENST00000523390 PIP4P2Q8N4L2 257 aa10.47□□□□□ -0.73
PCDHGB1-201ENST00000523390 OR1N2Q8NGR9 330 aa10.47□□□□□ -0.73
PCDHGB1-201ENST00000523390 TMEM70Q9BUB7 260 aa10.47□□□□□ -0.73
PCDHGB1-201ENST00000523390 POU2AF1Q16633 256 aa10.47□□□□□ -0.73
PCDHGB1-201ENST00000523390 ZFYVE26Q68DK2 2539 aa10.47□□□□□ -0.73
PCDHGB1-201ENST00000523390 USP9XQ93008 2570 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms