RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, human

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-238	ENST00000523298	PRB2	P02812	416 aa	Predicted RBP	2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	TRGC2	P03986	189 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	CTSE	P14091	401 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	CRYGS	P22914	178 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	OR10J1	P30954	320 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	POLR2I	P36954	125 aa	Known RBP	2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	NMU	P48645	174 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	PSMB3	P49720	205 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	ZNF136	P52737	540 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	ZNF138	P52744	262 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	EIF5A	P63241	154 aa	Known RBP	2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	KLRD1	Q13241	179 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	DIAPH2-AS1	Q14236	149 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	UBE2S	Q16763	222 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	KHDC3L	Q587J8	217 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	LYPD2	Q6UXB3	125 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298		Q6ZS49	121 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	WDR86	Q86TI4	376 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	LRP11	Q86VZ4	500 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	C1orf174	Q8IYL3	243 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298		Q8N9L7	120 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	OR8D4	Q8NGM9	314 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	RPS4Y2	Q8TD47	263 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	ZNF721	Q8TF20	911 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	PEBP4	Q96S96	227 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	S100A13	Q99584	98 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	SPIN2A	Q99865	258 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	SPIN2B	Q9BPZ2	258 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	IMUP	Q9GZP8	106 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	TAAR3P	Q9P1P4	343 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	ENPP4	Q9Y6X5	453 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	SI	P14410	1827 aa		2.81	□□□□□ -1.96
CTNNA1-238	ENST00000523298	CIT	O14578	2027 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298		A0A096LNJ9	63 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	IGHV6-1	A0A0B4J1U7	121 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	IGHV1-69D	A0A0B4J2H0	117 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	TLCD2	A6NGC4	264 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298		A8MUN3	132 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	LST1	O00453	97 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	GSTZ1	O43708	216 aa	Predicted RBP	2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	OR2T1	O43869	369 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	CXCL5	P42830	114 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	P2RX1	P51575	399 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	AQP4	P55087	323 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	LINC00313	P59037	77 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	DEFA5	Q01523	94 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	MSMO1	Q15800	293 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	IQCJ	Q1A5X6	159 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	C10orf91	Q5T1B1	145 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	C1orf140	Q5VVS0	124 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	EIF5AL1	Q6IS14	154 aa	Known RBP	2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	SHISA6	Q6ZSJ9	500 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	ARPIN	Q7Z6K5	226 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	TRAPPC6B	Q86SZ2	158 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	RPS19BP1	Q86WX3	136 aa	Known RBP	2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	MSRB3	Q8IXL7	192 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	TEX29	Q8N6K0	151 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	SGMS2	Q8NHU3	365 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	SLC25A46	Q96AG3	418 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	GNPNAT1	Q96EK6	184 aa	Predicted RBP	2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	DPH3	Q96FX2	82 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	HYLS1	Q96M11	299 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	OR2A5	Q96R48	311 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	VAMP8	Q9BV40	100 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	GABARAPL3	Q9BY60	117 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	DPY30	Q9C005	99 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	BANF2	Q9H503	90 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	TUBA4B	Q9H853	241 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	CCDC167	Q9P0B6	97 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	MARCO	Q9UEW3	520 aa	Predicted RBP	2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	HES2	Q9Y543	173 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	FANCM	Q8IYD8	2048 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	PTPRS	Q13332	1948 aa		2.8	□□□□□ -1.96
CTNNA1-238	ENST00000523298	DSPP	Q9NZW4	1301 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	TRAV27	A0A087WT01	109 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	TRAV41	A0A0B4J266	112 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	CD300LB	A8K4G0	201 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298		C9JQL5	133 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298		G3V3Q6	166 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	PEX7	O00628	323 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	RER1	O15258	196 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	DEDD	O75618	318 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	KLF7	O75840	302 aa	Predicted RBP	2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	HLA-DQB1	P01920	261 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	NUDT2	P50583	147 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	TMEM258	P61165	79 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	HES1	Q14469	280 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	TMEM183B	Q1AE95	376 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	NXNL2	Q5VZ03	156 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298		Q6AWC8	147 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	UNQ5815/PRO19632	Q6UWF5	114 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	AMTN	Q6UX39	209 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	ALKAL2	Q6UX46	152 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	SSX8	Q7RTT4	187 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	TMEM183A	Q8IXX5	376 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	ATOH7	Q8N100	152 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	RPP25L	Q8N5L8	163 aa	Known RBP	2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	OR2T10	Q8NGZ9	312 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	OR10AC1	Q8NH08	325 aa		2.79	□□□□□ -1.96
CTNNA1-238	ENST00000523298	OR4K13	Q8NH42	304 aa		2.79	□□□□□ -1.96

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