RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 SAMD13Q5VXD3 122 aa6.72□□□□□ -1.33
SDC2-207ENST00000522911 SIGLEC15Q6ZMC9 328 aa6.72□□□□□ -1.33
SDC2-207ENST00000522911 OR13C8Q8NGS7 320 aa6.72□□□□□ -1.33
SDC2-207ENST00000522911 TMEM170AQ8WVE7 144 aa6.72□□□□□ -1.33
SDC2-207ENST00000522911 IL22RA2Q969J5 263 aa6.72□□□□□ -1.33
SDC2-207ENST00000522911 SCGB3A2Q96PL1 93 aa6.72□□□□□ -1.33
SDC2-207ENST00000522911 HEYLQ9NQ87 328 aaPredicted RBP6.72□□□□□ -1.33
SDC2-207ENST00000522911 LRP1BQ9NZR2 4599 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 PRSS29PA6NIE9 313 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 A8MTW9 85 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 TEX46H3BTG2 121 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 ARPC5O15511 151 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 NXPH3O95157 252 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 CFDP00746 253 aaPredicted RBP6.71□□□□□ -1.34
SDC2-207ENST00000522911 IL4P05112 153 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 RD3LP0DJH9 198 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 SMCPP49901 116 aaPredicted RBP6.71□□□□□ -1.34
SDC2-207ENST00000522911 PAX9P55771 341 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 CYCSP99999 105 aaKnown RBP6.71□□□□□ -1.34
SDC2-207ENST00000522911 SP6Q3SY56 376 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 FAM122CQ6P4D5 195 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 UQCC3Q6UW78 93 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 FOXI2Q6ZQN5 318 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 SELENOHQ8IZQ5 122 aaKnown RBP6.71□□□□□ -1.34
SDC2-207ENST00000522911 OR4D10Q8NGI6 311 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 OR51S1Q8NGJ8 323 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 OR51G1Q8NGK1 321 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 RTBDNQ9BSG5 229 aaPredicted RBP6.71□□□□□ -1.34
SDC2-207ENST00000522911 NAA60Q9H7X0 242 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 CLEC5AQ9NY25 188 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 XCL2Q9UBD3 114 aa6.71□□□□□ -1.34
SDC2-207ENST00000522911 PIGBOS1A0A0B4J2F0 54 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 CRYM-AS1A6NIL9 109 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 NMBP08949 121 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 OR5AC1P0C628 307 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 OR4E1P0C645 316 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 PSG1P11464 419 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 PSMB3P49720 205 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 FAM3BP58499 235 aaPredicted RBP6.7□□□□□ -1.34
SDC2-207ENST00000522911 UBE2MP61081 183 aaKnown RBP6.7□□□□□ -1.34
SDC2-207ENST00000522911 EIF5AP63241 154 aaKnown RBP6.7□□□□□ -1.34
SDC2-207ENST00000522911 ZNF546Q86UE3 836 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 KCNRGQ8N5I3 272 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 ZNF709Q8N972 641 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 COQ8AQ8NI60 647 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 RNASE11Q8TAA1 199 aaKnown RBP6.7□□□□□ -1.34
SDC2-207ENST00000522911 MARCH1Q8TCQ1 289 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 NPIPB3Q92617 1050 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 GPR146Q96CH1 333 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 RNF125Q96EQ8 232 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 SAV1Q9H4B6 383 aaPredicted RBP6.7□□□□□ -1.34
SDC2-207ENST00000522911 DKK2Q9UBU2 259 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 HSPB7Q9UBY9 170 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 CACNG5Q9UF02 275 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 GPR132Q9UNW8 380 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 RFNGQ9Y644 331 aa6.7□□□□□ -1.34
SDC2-207ENST00000522911 SOCS3O14543 225 aa6.69□□□□□ -1.34
SDC2-207ENST00000522911 GPX4P36969 197 aaPredicted RBP6.69□□□□□ -1.34
SDC2-207ENST00000522911 ID1P41134 155 aa6.69□□□□□ -1.34
SDC2-207ENST00000522911 SUPT4H1P63272 117 aaKnown RBP6.69□□□□□ -1.34
SDC2-207ENST00000522911 LINC01559Q495D7 138 aa6.69□□□□□ -1.34
SDC2-207ENST00000522911 SMUG1Q53HV7 270 aa6.69□□□□□ -1.34
SDC2-207ENST00000522911 ACOT7LQ6ZUV0 252 aa6.69□□□□□ -1.34
SDC2-207ENST00000522911 INO80EQ8NBZ0 244 aaPredicted RBP6.69□□□□□ -1.34
SDC2-207ENST00000522911 THAP6Q8TBB0 222 aa6.69□□□□□ -1.34
SDC2-207ENST00000522911 SLC45A2Q9UMX9 530 aa6.69□□□□□ -1.34
SDC2-207ENST00000522911 C14orf166Q9Y224 244 aaKnown RBP6.69□□□□□ -1.34
SDC2-207ENST00000522911 PRELID1Q9Y255 219 aa6.69□□□□□ -1.34
SDC2-207ENST00000522911 A0A0B4J2A0 478 aa6.68□□□□□ -1.34
SDC2-207ENST00000522911 RAB19A4D1S5 217 aa6.68□□□□□ -1.34
SDC2-207ENST00000522911 CEBPZOSA8MTT3 80 aa6.68□□□□□ -1.34
SDC2-207ENST00000522911 ISLRO14498 428 aa6.68□□□□□ -1.34
SDC2-207ENST00000522911 BCL2L11O43521 198 aa6.68□□□□□ -1.34
SDC2-207ENST00000522911 IFNA21P01568 189 aa6.68□□□□□ -1.34
SDC2-207ENST00000522911 FABP1P07148 127 aa6.68□□□□□ -1.34
SDC2-207ENST00000522911 MEOX2P50222 304 aa6.68□□□□□ -1.34
SDC2-207ENST00000522911 H2BFSP57053 126 aa6.68□□□□□ -1.34
SDC2-207ENST00000522911 SCGB2B2Q4G0G5 96 aa6.68□□□□□ -1.34
SDC2-207ENST00000522911 SOHLH1Q5JUK2 328 aa6.68□□□□□ -1.34
SDC2-207ENST00000522911 TMEM268Q5VZI3 342 aa6.68□□□□□ -1.34
SDC2-207ENST00000522911 FAAP20Q6NZ36 180 aa6.68□□□□□ -1.34
SDC2-207ENST00000522911 NIPSNAP3BQ9BS92 247 aa6.68□□□□□ -1.34
SDC2-207ENST00000522911 SHPKQ9UHJ6 478 aa6.68□□□□□ -1.34
SDC2-207ENST00000522911 IGKV1D-37A0A075B6S9 117 aa6.67□□□□□ -1.34
SDC2-207ENST00000522911 IFNA10P01566 189 aa6.67□□□□□ -1.34
SDC2-207ENST00000522911 PET100P0DJ07 73 aa6.67□□□□□ -1.34
SDC2-207ENST00000522911 GDF5OSQ5U4N7 250 aa6.67□□□□□ -1.34
SDC2-207ENST00000522911 EIF5AL1Q6IS14 154 aaKnown RBP6.67□□□□□ -1.34
SDC2-207ENST00000522911 ALKAL2Q6UX46 152 aa6.67□□□□□ -1.34
SDC2-207ENST00000522911 TMED4Q7Z7H5 227 aa6.67□□□□□ -1.34
SDC2-207ENST00000522911 LGI3Q8N145 548 aa6.67□□□□□ -1.34
SDC2-207ENST00000522911 C15orf53Q8NAA6 179 aa6.67□□□□□ -1.34
SDC2-207ENST00000522911 DTD1Q8TEA8 209 aa6.67□□□□□ -1.34
SDC2-207ENST00000522911 MITD1Q8WV92 249 aa6.67□□□□□ -1.34
SDC2-207ENST00000522911 ACY3Q96HD9 319 aa6.67□□□□□ -1.34
SDC2-207ENST00000522911 ARPC5LQ9BPX5 153 aa6.67□□□□□ -1.34
SDC2-207ENST00000522911 SCRT1Q9BWW7 348 aa6.67□□□□□ -1.34
SDC2-207ENST00000522911 TNFSF18Q9UNG2 199 aa6.67□□□□□ -1.34
SDC2-207ENST00000522911 KCNIP3Q9Y2W7 256 aa6.67□□□□□ -1.34
SDC2-207ENST00000522911 MUC4Q99102 2169 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms