RNA–Protein interactions for RNA: ENST00000520846.1

MSR1-211, Transcript of macrophage scavenger receptor 1, human

TSL 4

Gene MSR1, Length 373 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSR1-211	ENST00000520846	PBOV1	Q9GZY1	135 aa		0.48	□□□□□ -2.33
MSR1-211	ENST00000520846	PSTPIP2	Q9H939	334 aa		0.48	□□□□□ -2.33
MSR1-211	ENST00000520846	TMEM138	Q9NPI0	162 aa		0.48	□□□□□ -2.33
MSR1-211	ENST00000520846	DOCK4	Q8N1I0	1966 aa		0.48	□□□□□ -2.33
MSR1-211	ENST00000520846	CECR2	Q9BXF3	1484 aa		0.48	□□□□□ -2.33
MSR1-211	ENST00000520846	USP24	Q9UPU5	2620 aa		0.47	□□□□□ -2.33
MSR1-211	ENST00000520846	TMEM210	A6NLX4	147 aa		0.47	□□□□□ -2.33
MSR1-211	ENST00000520846	PHGR1	C9JFL3	82 aa		0.47	□□□□□ -2.33
MSR1-211	ENST00000520846	IGLV3-1	P01715	115 aa		0.47	□□□□□ -2.33
MSR1-211	ENST00000520846	OR10J4	P0C629	311 aa		0.47	□□□□□ -2.33
MSR1-211	ENST00000520846	COX7C	P15954	63 aa		0.47	□□□□□ -2.33
MSR1-211	ENST00000520846	HOXA6	P31267	233 aa		0.47	□□□□□ -2.33
MSR1-211	ENST00000520846	DYNLT3	P51808	116 aa		0.47	□□□□□ -2.33
MSR1-211	ENST00000520846	MRPS25	P82663	173 aa	Known RBP	0.47	□□□□□ -2.33
MSR1-211	ENST00000520846	CDK6	Q00534	326 aa		0.47	□□□□□ -2.33
MSR1-211	ENST00000520846	PSMF1	Q92530	271 aa		0.47	□□□□□ -2.33
MSR1-211	ENST00000520846	MUCL1	Q96DR8	90 aa		0.47	□□□□□ -2.33
MSR1-211	ENST00000520846	LYSMD1	Q96S90	227 aa		0.47	□□□□□ -2.33
MSR1-211	ENST00000520846	ARMC1	Q9NVT9	282 aa		0.47	□□□□□ -2.33
MSR1-211	ENST00000520846	SI	P14410	1827 aa		0.47	□□□□□ -2.33
MSR1-211	ENST00000520846	NUP98	P52948	1817 aa		0.47	□□□□□ -2.33
MSR1-211	ENST00000520846	FREM3	P0C091	2139 aa		0.47	□□□□□ -2.33
MSR1-211	ENST00000520846	MIA2	Q96PC5	1412 aa		0.47	□□□□□ -2.33
MSR1-211	ENST00000520846	AHNAK	Q09666	5890 aa	Known RBP	0.46	□□□□□ -2.34
MSR1-211	ENST00000520846		A0A087WSZ3	146 aa		0.46	□□□□□ -2.34
MSR1-211	ENST00000520846		B4DSR2	109 aa		0.46	□□□□□ -2.34
MSR1-211	ENST00000520846		M0R233	179 aa		0.46	□□□□□ -2.34
MSR1-211	ENST00000520846	NCALD	P61601	193 aa		0.46	□□□□□ -2.34
MSR1-211	ENST00000520846	TMED2	Q15363	201 aa		0.46	□□□□□ -2.34
MSR1-211	ENST00000520846	C1orf134	Q5TEV5	83 aa		0.46	□□□□□ -2.34
MSR1-211	ENST00000520846	KRTAP26-1	Q6PEX3	210 aa		0.46	□□□□□ -2.34
MSR1-211	ENST00000520846	OR5D16	Q8NGK9	328 aa		0.46	□□□□□ -2.34
MSR1-211	ENST00000520846		Q8TAT8	98 aa		0.46	□□□□□ -2.34
MSR1-211	ENST00000520846	RAB37	Q96AX2	223 aa		0.46	□□□□□ -2.34
MSR1-211	ENST00000520846	DGCR14	Q96DF8	476 aa	Known RBP	0.46	□□□□□ -2.34
MSR1-211	ENST00000520846	OR52A1	Q9UKL2	312 aa		0.46	□□□□□ -2.34
MSR1-211	ENST00000520846	UBR2	Q8IWV8	1755 aa		0.46	□□□□□ -2.34
MSR1-211	ENST00000520846	PTPRF	P10586	1907 aa		0.46	□□□□□ -2.34
MSR1-211	ENST00000520846	MYLK	Q15746	1914 aa		0.46	□□□□□ -2.34
MSR1-211	ENST00000520846	CIT	O14578	2027 aa		0.45	□□□□□ -2.34
MSR1-211	ENST00000520846	BANF1	O75531	89 aa		0.45	□□□□□ -2.34
MSR1-211	ENST00000520846	NDUFC2	O95298	119 aa		0.45	□□□□□ -2.34
MSR1-211	ENST00000520846	C1QB	P02746	253 aa		0.45	□□□□□ -2.34
MSR1-211	ENST00000520846	NFYB	P25208	207 aa		0.45	□□□□□ -2.34
MSR1-211	ENST00000520846	HSD11B1	P28845	292 aa		0.45	□□□□□ -2.34
MSR1-211	ENST00000520846	RAB5C	P51148	216 aa		0.45	□□□□□ -2.34
MSR1-211	ENST00000520846	OR5AS1	Q8N127	324 aa		0.45	□□□□□ -2.34
MSR1-211	ENST00000520846	POP5	Q969H6	163 aa	Known RBP	0.45	□□□□□ -2.34
MSR1-211	ENST00000520846	PRRT1	Q99946	306 aa		0.45	□□□□□ -2.34
MSR1-211	ENST00000520846	GGACT	Q9BVM4	153 aa		0.45	□□□□□ -2.34
MSR1-211	ENST00000520846	POPDC3	Q9HBV1	291 aa		0.45	□□□□□ -2.34
MSR1-211	ENST00000520846	PYCARD	Q9ULZ3	195 aa		0.45	□□□□□ -2.34
MSR1-211	ENST00000520846	ARL5A	Q9Y689	179 aa		0.45	□□□□□ -2.34
MSR1-211	ENST00000520846	MYO5A	Q9Y4I1	1855 aa	Known RBP	0.45	□□□□□ -2.34
MSR1-211	ENST00000520846	DUXB	A0A1W2PPF3	345 aa		0.44	□□□□□ -2.34
MSR1-211	ENST00000520846	AIP	O00170	330 aa		0.44	□□□□□ -2.34
MSR1-211	ENST00000520846	PATE2	Q6UY27	113 aa		0.44	□□□□□ -2.34
MSR1-211	ENST00000520846	IFT20	Q8IY31	132 aa		0.44	□□□□□ -2.34
MSR1-211	ENST00000520846	CHMP6	Q96FZ7	201 aa		0.44	□□□□□ -2.34
MSR1-211	ENST00000520846	CCDC94	Q9BW85	323 aa	Predicted RBP	0.44	□□□□□ -2.34
MSR1-211	ENST00000520846	C10orf95	Q9H7T3	257 aa		0.44	□□□□□ -2.34
MSR1-211	ENST00000520846	MED29	Q9NX70	200 aa		0.44	□□□□□ -2.34
MSR1-211	ENST00000520846	CAMSAP1	Q5T5Y3	1602 aa		0.44	□□□□□ -2.34
MSR1-211	ENST00000520846	PHRF1	Q9P1Y6	1649 aa	Known RBP	0.44	□□□□□ -2.34
MSR1-211	ENST00000520846	ADGRL3	Q9HAR2	1447 aa		0.44	□□□□□ -2.34
MSR1-211	ENST00000520846	TET1	Q8NFU7	2136 aa		0.44	□□□□□ -2.34
MSR1-211	ENST00000520846	ZNF462	Q96JM2	2506 aa		0.43	□□□□□ -2.34
MSR1-211	ENST00000520846	CEP164	Q9UPV0	1460 aa		0.43	□□□□□ -2.34
MSR1-211	ENST00000520846	TRAV27	A0A087WT01	109 aa		0.43	□□□□□ -2.34
MSR1-211	ENST00000520846		G3V2T6	193 aa		0.43	□□□□□ -2.34
MSR1-211	ENST00000520846	IGLV1-51	P01701	117 aa		0.43	□□□□□ -2.34
MSR1-211	ENST00000520846	CRH	P06850	196 aa		0.43	□□□□□ -2.34
MSR1-211	ENST00000520846	SCGB2B2	Q4G0G5	96 aa		0.43	□□□□□ -2.34
MSR1-211	ENST00000520846	ARPIN	Q7Z6K5	226 aa		0.43	□□□□□ -2.34
MSR1-211	ENST00000520846	S100A7A	Q86SG5	101 aa		0.43	□□□□□ -2.34
MSR1-211	ENST00000520846	OR10AC1	Q8NH08	325 aa		0.43	□□□□□ -2.34
MSR1-211	ENST00000520846	OR10AG1	Q8NH19	301 aa		0.43	□□□□□ -2.34
MSR1-211	ENST00000520846	OR4K15	Q8NH41	348 aa		0.43	□□□□□ -2.34
MSR1-211	ENST00000520846	CHCHD1	Q96BP2	118 aa	Known RBP	0.43	□□□□□ -2.34
MSR1-211	ENST00000520846	ZNF714	Q96N38	554 aa		0.43	□□□□□ -2.34
MSR1-211	ENST00000520846	RFX7	Q2KHR2	1363 aa		0.43	□□□□□ -2.34
MSR1-211	ENST00000520846	ZGRF1	Q86YA3	2104 aa		0.43	□□□□□ -2.34
MSR1-211	ENST00000520846	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.42	□□□□□ -2.34
MSR1-211	ENST00000520846	FANCM	Q8IYD8	2048 aa		0.42	□□□□□ -2.34
MSR1-211	ENST00000520846	JMJD7-PLA2G4B	H0Y9G9	81 aa		0.42	□□□□□ -2.34
MSR1-211	ENST00000520846	ATG12	O94817	140 aa		0.42	□□□□□ -2.34
MSR1-211	ENST00000520846	PPY	P01298	95 aa		0.42	□□□□□ -2.34
MSR1-211	ENST00000520846	CAPZB	P47756	277 aa		0.42	□□□□□ -2.34
MSR1-211	ENST00000520846	VBP1	P61758	197 aa		0.42	□□□□□ -2.34
MSR1-211	ENST00000520846	SPINK9	Q5DT21	86 aa		0.42	□□□□□ -2.34
MSR1-211	ENST00000520846	PXT1	Q8NFP0	134 aa		0.42	□□□□□ -2.34
MSR1-211	ENST00000520846	ZC2HC1A	Q96GY0	325 aa		0.42	□□□□□ -2.34
MSR1-211	ENST00000520846	CEP19	Q96LK0	163 aa		0.42	□□□□□ -2.34
MSR1-211	ENST00000520846	HYLS1	Q96M11	299 aa		0.42	□□□□□ -2.34
MSR1-211	ENST00000520846	OR2J1	Q9GZK6	312 aa		0.42	□□□□□ -2.34
MSR1-211	ENST00000520846	HSPB8	Q9UJY1	196 aa		0.42	□□□□□ -2.34
MSR1-211	ENST00000520846	PRND	Q9UKY0	176 aa		0.42	□□□□□ -2.34
MSR1-211	ENST00000520846	MUC4	Q99102	2169 aa		0.42	□□□□□ -2.34
MSR1-211	ENST00000520846	MGAM	O43451	1857 aa		0.41	□□□□□ -2.34
MSR1-211	ENST00000520846	NUP210L	Q5VU65	1888 aa		0.41	□□□□□ -2.34

Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms