RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 PEMTQ9UBM1 199 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 OR51B2Q9Y5P1 312 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 SOX21Q9Y651 276 aaPredicted RBP4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 PXMP4Q9Y6I8 212 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 ZFHX3Q15911 3703 aa4.44□□□□□ -1.7
CTNNA1-220ENST00000520260 C15orf61A6NNL5 157 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 ZNF705FA8MVS1 300 aaPredicted RBP4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 UPK2O00526 184 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 SYNGR2O43760 224 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 SOX15O60248 233 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 S1PR2O95136 353 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 ZNF705DP0CH99 300 aaPredicted RBP4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 ZNF705BP0CI00 300 aaPredicted RBP4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 RPL29P47914 159 aaKnown RBP4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 RAB9AP51151 201 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 ATP5G2Q06055 141 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 TMEM183BQ1AE95 376 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 NSUN5P1Q3KNT7 163 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 SAPCD1Q5SSQ6 148 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 COL5A1-AS1Q5SY13 56 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 LCE4AQ5TA78 99 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 ZNF705AQ6ZN79 300 aaPredicted RBP4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 SSX7Q7RTT5 188 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 HAPLN4Q86UW8 402 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 RNF152Q8N8N0 203 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 TAF15Q92804 592 aaKnown RBP eCLIP4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 RSG1Q9BU20 258 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 HINT2Q9BX68 163 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 PARLQ9H300 379 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 VSIRQ9H7M9 311 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 SLC39A9Q9NUM3 307 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 AURKAIP1Q9NWT8 199 aaPredicted RBP4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 RNF24Q9Y225 148 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 ZFP30Q9Y2G7 519 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 TRAPPC1Q9Y5R8 145 aa4.43□□□□□ -1.7
CTNNA1-220ENST00000520260 STAB1Q9NY15 2570 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 A0A1W2PPQ1 181 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 F6UZH7 168 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 LINC01619G3V211 115 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 IGLV2-23P01705 113 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 AMY1AP04745 511 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 LGALS1P09382 135 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 PSMB8P28062 276 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 G6PCP35575 357 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 FGF8P55075 233 aaPredicted RBP4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 HSPE1P61604 102 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 PRCDQ00LT1 54 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 SRSF2Q01130 221 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 ARL16Q0P5N6 197 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 Q0VG73 95 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 RPEL1Q2QD12 228 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 FAM106AQ4KMX7 169 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 TMEM14EPQ6UXP3 125 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 TTC9CQ8N5M4 171 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 OR4B1Q8NGF8 309 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 OR52E5Q8NH55 327 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 CMTM2Q8TAZ6 248 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 VN1R17PQ8TDU5 208 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 DTD1Q8TEA8 209 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 ORAOV1Q8WV07 137 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 RPUSD4Q96CM3 377 aaKnown RBP4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 OR4C12Q96R67 309 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 CITED2Q99967 270 aaPredicted RBP4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 HSPB9Q9BQS6 159 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 TXNDC17Q9BRA2 123 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 HEYLQ9NQ87 328 aaPredicted RBP4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 TPSG1Q9NRR2 321 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 TMEM14BQ9NUH8 114 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 PSENENQ9NZ42 101 aa4.42□□□□□ -1.7
CTNNA1-220ENST00000520260 TRAV30A0A087WSZ9 112 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 TRBV9A0A0B4J1U6 114 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 A0A0G2JRQ6 117 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 A0A1W2PRX2 142 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 ZNF320A2RRD8 509 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 K7EP13 123 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 CCL24O00175 119 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 PDE6DO43924 150 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 RAMP3O60896 148 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 IGLV1-40P01703 118 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 IGLV2-14P01704 120 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 REG1AP05451 166 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 CRYGBP07316 175 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 CD28P10747 220 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 MYOD1P15172 320 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 CNTFRP26992 372 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 RPS20P60866 119 aaKnown RBP4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 RPL30P62888 115 aaKnown RBP4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 RHOGP84095 191 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 SLC38A11Q08AI6 406 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 EIF4EBP1Q13541 118 aaPredicted RBP4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 COTL1Q14019 142 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 VWC2Q2TAL6 325 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 UTF1Q5T230 341 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 C9orf66Q5T8R8 295 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 FAM78BQ5VT40 261 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 FAM53AQ6NSI3 398 aaPredicted RBP4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 Q6ZWC4 215 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 LINC01551Q86U37 167 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 ZNF329Q86UD4 541 aa4.41□□□□□ -1.7
CTNNA1-220ENST00000520260 TMEM256Q8N2U0 113 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms