RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 OR2T10Q8NGZ9 312 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 CANT1Q8WVQ1 401 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 VPS25Q9BRG1 176 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 MAP1LC3BQ9GZQ8 125 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 PBOV1Q9GZY1 135 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 ACER3Q9NUN7 267 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 MED9Q9NWA0 146 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 COA4Q9NYJ1 87 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 OR5AC2Q9NZP5 309 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 JPT1Q9UK76 154 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 SSR3Q9UNL2 185 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 NALCNQ8IZF0 1738 aa1.99□□□□□ -2.09
HMGB1P46-201ENST00000520062 UBR2Q8IWV8 1755 aa1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 DOCK10Q96BY6 2186 aa1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 C9orf170A2RU37 121 aa1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 GGCTO75223 188 aaKnown RBP1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 UBL3O95164 117 aa1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 DNAJB13P59910 316 aa1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 CKS1BP61024 79 aa1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 EMX2Q04743 252 aa1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 SURF2Q15527 256 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 DEFB119Q8N690 84 aa1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 STAG3L4Q8TBR4 150 aa1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 PPP3R2Q96LZ3 170 aa1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 CCDC32Q9BV29 185 aa1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 GGACTQ9BVM4 153 aa1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 MRPL32Q9BYC8 188 aaKnown RBP1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 TMEM126AQ9H061 195 aa1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 CALML5Q9NZT1 146 aa1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 ARAP1Q96P48 1450 aa1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 CDK5RAP2Q96SN8 1893 aa1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 ECM29Q5VYK3 1845 aa1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 SCN10AQ9Y5Y9 1956 aa1.98□□□□□ -2.09
HMGB1P46-201ENST00000520062 NUMA1Q14980 2115 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 HEATR5AQ86XA9 2040 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 FN1P02751 2386 aaKnown RBP1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 DUXBA0A1W2PPF3 345 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 FAM92AA1XBS5 289 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 DEGS1O15121 323 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 PIAS1O75925 651 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 ASAH2BP0C7U1 165 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 MPC1LP0DKB6 136 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 RBP2P50120 134 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 PDE6HQ13956 83 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 C10orf55Q5SWW7 151 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 HAGHLQ6PII5 290 aaPredicted RBP1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 EXOC3-AS1Q8N2X6 119 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 FAM24BQ8N5W8 94 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 LINC00311Q8N616 119 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 TEX37Q96LM6 180 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 PRADC1Q9BSG0 188 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 ADAT1Q9BUB4 502 aaKnown RBP1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 PDCD10Q9BUL8 212 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 FAIMQ9NVQ4 179 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 BCL9O00512 1426 aa1.97□□□□□ -2.09
HMGB1P46-201ENST00000520062 ZFHX2Q9C0A1 2572 aaPredicted RBP1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 A0A096LPI6 279 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 TRAV14DV4A0A0A6YYC5 116 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 TRAV1-1A0A0B4J248 108 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 A0A1W2PRE2 83 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 M0R378 163 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 PROSCO94903 275 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 FAM107AO95990 144 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 SELENOWP63302 87 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 RHOGP84095 191 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 ESRGQ1W209 222 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 UNQ6190/PRO20217Q6UXQ8 127 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 IFT20Q8IY31 132 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 Q8N2B8 174 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 C3orf56Q8N813 242 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 MALSU1Q96EH3 234 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 LYSMD1Q96S90 227 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 LXNQ9BS40 222 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 EFCAB11Q9BUY7 163 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 PBDC1Q9BVG4 233 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 BCL2L10Q9HD36 194 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 LAMTOR3Q9UHA4 124 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 GNG8Q9UK08 70 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 TTC37Q6PGP7 1564 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 BICRAQ9NZM4 1560 aa1.96□□□□□ -2.1
HMGB1P46-201ENST00000520062 CCDC88CQ9P219 2028 aa1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 NUP210Q8TEM1 1887 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 ERBINQ96RT1 1412 aa1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 A0A1B0GX51 115 aa1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 TMEM189A5PLL7 270 aa1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 RIIAD1A6NNX1 92 aa1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 MGST1P10620 155 aaKnown RBP1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 SSR2P43308 183 aa1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 RRAS2P62070 204 aaPredicted RBP1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 UBE2BP63146 152 aa1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 DYNLT1P63172 113 aa1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 PDZD9Q8IXQ8 264 aa1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 SLC30A7Q8NEW0 376 aa1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 C14orf144Q96I85 54 aa1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 LINC00467Q9BRT7 94 aa1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 SS18L2Q9UHA2 77 aa1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 ERICH3Q5RHP9 1530 aa1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 MYH6P13533 1939 aa1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 FBN1P35555 2871 aaKnown RBP1.95□□□□□ -2.1
HMGB1P46-201ENST00000520062 UHRF1BP1LA0JNW5 1464 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 196.8 ms