RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 RAB5CP51148 216 aa10.71□□□□□ -0.69
SDC2-203ENST00000519587 KHDC3LQ587J8 217 aa10.71□□□□□ -0.69
SDC2-203ENST00000519587 FAM122CQ6P4D5 195 aa10.71□□□□□ -0.69
SDC2-203ENST00000519587 C16orf54Q6UWD8 224 aa10.71□□□□□ -0.69
SDC2-203ENST00000519587 DPPA3Q6W0C5 159 aa10.71□□□□□ -0.69
SDC2-203ENST00000519587 RBPMS2Q6ZRY4 209 aaKnown RBP10.71□□□□□ -0.69
SDC2-203ENST00000519587 BPIFA4PQ86YQ2 179 aa10.71□□□□□ -0.69
SDC2-203ENST00000519587 STXBP6Q8NFX7 210 aa10.71□□□□□ -0.69
SDC2-203ENST00000519587 GLMPQ8WWB7 406 aa10.71□□□□□ -0.69
SDC2-203ENST00000519587 ACTR3CQ9C0K3 210 aaPredicted RBP10.71□□□□□ -0.69
SDC2-203ENST00000519587 MLXQ9UH92 298 aa10.71□□□□□ -0.69
SDC2-203ENST00000519587 NOTCH3Q9UM47 2321 aa10.71□□□□□ -0.69
SDC2-203ENST00000519587 RFNGQ9Y644 331 aa10.71□□□□□ -0.69
SDC2-203ENST00000519587 TRAV25A0A0B4J276 109 aa10.7□□□□□ -0.7
SDC2-203ENST00000519587 IGLV1-51P01701 117 aa10.7□□□□□ -0.7
SDC2-203ENST00000519587 APOHP02749 345 aaPredicted RBP10.7□□□□□ -0.7
SDC2-203ENST00000519587 ATF4P18848 351 aaPredicted RBP10.7□□□□□ -0.7
SDC2-203ENST00000519587 MEOX2P50222 304 aa10.7□□□□□ -0.7
SDC2-203ENST00000519587 RPL11P62913 178 aaKnown RBP10.7□□□□□ -0.7
SDC2-203ENST00000519587 DEFB114Q30KQ6 69 aa10.7□□□□□ -0.7
SDC2-203ENST00000519587 SAMD13Q5VXD3 122 aa10.7□□□□□ -0.7
SDC2-203ENST00000519587 LEMD1Q68G75 181 aa10.7□□□□□ -0.7
SDC2-203ENST00000519587 SIGLEC15Q6ZMC9 328 aa10.7□□□□□ -0.7
SDC2-203ENST00000519587 ADAMTSL5Q6ZMM2 481 aa10.7□□□□□ -0.7
SDC2-203ENST00000519587 TCF24Q7RTU0 167 aa10.7□□□□□ -0.7
SDC2-203ENST00000519587 SEPSECSQ9HD40 501 aaKnown RBP10.7□□□□□ -0.7
SDC2-203ENST00000519587 RPRMQ9NS64 109 aa10.7□□□□□ -0.7
SDC2-203ENST00000519587 ZMAT5Q9UDW3 170 aaKnown RBP10.7□□□□□ -0.7
SDC2-203ENST00000519587 CTXND1A0A1B0GTU2 59 aa10.69□□□□□ -0.7
SDC2-203ENST00000519587 IGLL1P15814 213 aa10.69□□□□□ -0.7
SDC2-203ENST00000519587 EDN2P20800 178 aa10.69□□□□□ -0.7
SDC2-203ENST00000519587 PAFAH1B2P68402 229 aa10.69□□□□□ -0.7
SDC2-203ENST00000519587 OR7C2O60412 319 aa10.68□□□□□ -0.7
SDC2-203ENST00000519587 DEFA6Q01524 100 aa10.68□□□□□ -0.7
SDC2-203ENST00000519587 CD300EQ496F6 205 aaPredicted RBP10.68□□□□□ -0.7
SDC2-203ENST00000519587 ALKAL2Q6UX46 152 aa10.68□□□□□ -0.7
SDC2-203ENST00000519587 PQLC2Q6ZP29 291 aa10.68□□□□□ -0.7
SDC2-203ENST00000519587 MIR17HGQ75NE6 70 aa10.68□□□□□ -0.7
SDC2-203ENST00000519587 TMEM61Q8N0U2 210 aa10.68□□□□□ -0.7
SDC2-203ENST00000519587 RPP25LQ8N5L8 163 aaKnown RBP10.68□□□□□ -0.7
SDC2-203ENST00000519587 FAM213BQ8TBF2 198 aa10.68□□□□□ -0.7
SDC2-203ENST00000519587 RAB24Q969Q5 203 aa10.68□□□□□ -0.7
SDC2-203ENST00000519587 SPAG8Q99932 426 aaPredicted RBP10.68□□□□□ -0.7
SDC2-203ENST00000519587 TMEM14CQ9P0S9 112 aa10.68□□□□□ -0.7
SDC2-203ENST00000519587 OR4C46A6NHA9 309 aa10.67□□□□□ -0.7
SDC2-203ENST00000519587 ZNF785A8K8V0 405 aa10.67□□□□□ -0.7
SDC2-203ENST00000519587 TSPAN4O14817 238 aa10.67□□□□□ -0.7
SDC2-203ENST00000519587 IFNA7P01567 189 aa10.67□□□□□ -0.7
SDC2-203ENST00000519587 SULT1A2P50226 295 aa10.67□□□□□ -0.7
SDC2-203ENST00000519587 GUK1Q16774 197 aa10.67□□□□□ -0.7
SDC2-203ENST00000519587 MORN5Q5VZ52 161 aa10.67□□□□□ -0.7
SDC2-203ENST00000519587 SPATA31B1PQ5VZV4 182 aa10.67□□□□□ -0.7
SDC2-203ENST00000519587 SLC25A2Q9BXI2 301 aa10.67□□□□□ -0.7
SDC2-203ENST00000519587 NRN1Q9NPD7 142 aa10.67□□□□□ -0.7
SDC2-203ENST00000519587 TRAV2A0A0B4J234 112 aa10.66□□□□□ -0.7
SDC2-203ENST00000519587 TEX46H3BTG2 121 aa10.66□□□□□ -0.7
SDC2-203ENST00000519587 DNASE2O00115 360 aaPredicted RBP10.66□□□□□ -0.7
SDC2-203ENST00000519587 GP9P14770 177 aa10.66□□□□□ -0.7
SDC2-203ENST00000519587 UBE2L3P68036 154 aaKnown RBP10.66□□□□□ -0.7
SDC2-203ENST00000519587 GUCA2BQ16661 112 aa10.66□□□□□ -0.7
SDC2-203ENST00000519587 FAM90A2PQ658T7 463 aa10.66□□□□□ -0.7
SDC2-203ENST00000519587 RNF141Q8WVD5 230 aa10.66□□□□□ -0.7
SDC2-203ENST00000519587 PAXXQ9BUH6 204 aa10.66□□□□□ -0.7
SDC2-203ENST00000519587 A0A087X0K7 114 aa10.65□□□□□ -0.7
SDC2-203ENST00000519587 TRAV5A0A0B4J249 113 aa10.65□□□□□ -0.7
SDC2-203ENST00000519587 MAP1LC3B2A6NCE7 125 aa10.65□□□□□ -0.7
SDC2-203ENST00000519587 CXorf1O96002 111 aa10.65□□□□□ -0.7
SDC2-203ENST00000519587 STAG3L2P0CL84 134 aa10.65□□□□□ -0.7
SDC2-203ENST00000519587 STAG3L3P0CL85 134 aa10.65□□□□□ -0.7
SDC2-203ENST00000519587 ARL14EPLP0DKL9 152 aa10.65□□□□□ -0.7
SDC2-203ENST00000519587 TEX261Q6UWH6 196 aa10.65□□□□□ -0.7
SDC2-203ENST00000519587 LCN15Q6UWW0 184 aa10.65□□□□□ -0.7
SDC2-203ENST00000519587 LRRC20Q8TCA0 184 aa10.65□□□□□ -0.7
SDC2-203ENST00000519587 FAM167A-AS1Q96KT0 104 aa10.65□□□□□ -0.7
SDC2-203ENST00000519587 MAP1LC3BQ9GZQ8 125 aa10.65□□□□□ -0.7
SDC2-203ENST00000519587 MS4A6AQ9H2W1 248 aa10.65□□□□□ -0.7
SDC2-203ENST00000519587 OR51M1Q9H341 326 aa10.65□□□□□ -0.7
SDC2-203ENST00000519587 IGKV3-7A0A075B6H7 116 aa10.64□□□□□ -0.71
SDC2-203ENST00000519587 ZNF705EA8MWA4 302 aaPredicted RBP10.64□□□□□ -0.71
SDC2-203ENST00000519587 HBE1P02100 147 aa10.64□□□□□ -0.71
SDC2-203ENST00000519587 H2AFB1P0C5Y9 115 aa10.64□□□□□ -0.71
SDC2-203ENST00000519587 HIST1H1EP10412 219 aaKnown RBP10.64□□□□□ -0.71
SDC2-203ENST00000519587 PDE6HQ13956 83 aa10.64□□□□□ -0.71
SDC2-203ENST00000519587 FAM74A1Q5RGS3 127 aa10.64□□□□□ -0.71
SDC2-203ENST00000519587 IQCF2Q8IXL9 164 aa10.64□□□□□ -0.71
SDC2-203ENST00000519587 HRH4Q9H3N8 390 aa10.64□□□□□ -0.71
SDC2-203ENST00000519587 TMEM167BQ9NRX6 74 aa10.64□□□□□ -0.71
SDC2-203ENST00000519587 SELENOKQ9Y6D0 94 aa10.64□□□□□ -0.71
SDC2-203ENST00000519587 SORL1Q92673 2214 aa10.64□□□□□ -0.71
SDC2-203ENST00000519587 HMGB3O15347 200 aaKnown RBP10.63□□□□□ -0.71
SDC2-203ENST00000519587 ZNF253O75346 499 aa10.63□□□□□ -0.71
SDC2-203ENST00000519587 IGLC2P0DOY2 106 aa10.63□□□□□ -0.71
SDC2-203ENST00000519587 PYYP10082 97 aa10.63□□□□□ -0.71
SDC2-203ENST00000519587 ID1P41134 155 aa10.63□□□□□ -0.71
SDC2-203ENST00000519587 FHITP49789 147 aa10.63□□□□□ -0.71
SDC2-203ENST00000519587 SNRPD3P62318 126 aaKnown RBP10.63□□□□□ -0.71
SDC2-203ENST00000519587 BLOC1S1P78537 153 aa10.63□□□□□ -0.71
SDC2-203ENST00000519587 ZNF726P1Q15940 193 aa10.63□□□□□ -0.71
SDC2-203ENST00000519587 OXLD1Q5BKU9 147 aa10.63□□□□□ -0.71
SDC2-203ENST00000519587 GBGT1Q8N5D6 347 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms