RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 IFNA16P05015 189 aa-0.54□□□□□ -2.5
PCM1-208ENST00000518877 EIF5AP63241 154 aaKnown RBP-0.54□□□□□ -2.5
PCM1-208ENST00000518877 LYG2Q86SG7 212 aa-0.54□□□□□ -2.5
PCM1-208ENST00000518877 CLDN22Q8N7P3 220 aa-0.54□□□□□ -2.5
PCM1-208ENST00000518877 FAM172AQ8WUF8 416 aa-0.54□□□□□ -2.5
PCM1-208ENST00000518877 RAB37Q96AX2 223 aa-0.54□□□□□ -2.5
PCM1-208ENST00000518877 MRPS26Q9BYN8 205 aaKnown RBP-0.54□□□□□ -2.5
PCM1-208ENST00000518877 OR52A1Q9UKL2 312 aa-0.54□□□□□ -2.5
PCM1-208ENST00000518877 KDM6AO15550 1401 aaPredicted RBP-0.55□□□□□ -2.5
PCM1-208ENST00000518877 MIA2Q96PC5 1412 aa-0.55□□□□□ -2.5
PCM1-208ENST00000518877 ABCA4P78363 2273 aa-0.55□□□□□ -2.5
PCM1-208ENST00000518877 PTPRDP23468 1912 aa-0.55□□□□□ -2.5
PCM1-208ENST00000518877 A0A087WSZ3 146 aa-0.55□□□□□ -2.5
PCM1-208ENST00000518877 A8MWV9 139 aa-0.55□□□□□ -2.5
PCM1-208ENST00000518877 SPINK1P00995 79 aa-0.55□□□□□ -2.5
PCM1-208ENST00000518877 PPIBP23284 216 aaKnown RBP-0.55□□□□□ -2.5
PCM1-208ENST00000518877 SRP14P37108 136 aaKnown RBP-0.55□□□□□ -2.5
PCM1-208ENST00000518877 EIF3IQ13347 325 aaKnown RBP-0.55□□□□□ -2.5
PCM1-208ENST00000518877 IAH1Q2TAA2 248 aaPredicted RBP-0.55□□□□□ -2.5
PCM1-208ENST00000518877 OCIAD2Q56VL3 154 aa-0.55□□□□□ -2.5
PCM1-208ENST00000518877 Q6ZQY7 126 aa-0.55□□□□□ -2.5
PCM1-208ENST00000518877 PXT1Q8NFP0 134 aa-0.55□□□□□ -2.5
PCM1-208ENST00000518877 SLC25A21Q9BQT8 299 aaPredicted RBP-0.55□□□□□ -2.5
PCM1-208ENST00000518877 LIMD2Q9BT23 127 aa-0.55□□□□□ -2.5
PCM1-208ENST00000518877 RNF122Q9H9V4 155 aa-0.55□□□□□ -2.5
PCM1-208ENST00000518877 LY96Q9Y6Y9 160 aa-0.55□□□□□ -2.5
PCM1-208ENST00000518877 COL24A1Q17RW2 1714 aa-0.55□□□□□ -2.5
PCM1-208ENST00000518877 NCOA1Q15788 1441 aa-0.55□□□□□ -2.5
PCM1-208ENST00000518877 CD3DP04234 171 aa-0.56□□□□□ -2.5
PCM1-208ENST00000518877 C8GP07360 202 aa-0.56□□□□□ -2.5
PCM1-208ENST00000518877 SERPINA6P08185 405 aa-0.56□□□□□ -2.5
PCM1-208ENST00000518877 SERPINB9P50453 376 aa-0.56□□□□□ -2.5
PCM1-208ENST00000518877 CDK6Q00534 326 aa-0.56□□□□□ -2.5
PCM1-208ENST00000518877 TMEM14EPQ6UXP3 125 aa-0.56□□□□□ -2.5
PCM1-208ENST00000518877 CANT1Q8WVQ1 401 aa-0.56□□□□□ -2.5
PCM1-208ENST00000518877 PBOV1Q9GZY1 135 aa-0.56□□□□□ -2.5
PCM1-208ENST00000518877 TVP23BQ9NYZ1 205 aa-0.56□□□□□ -2.5
PCM1-208ENST00000518877 MAP3K5Q99683 1374 aa-0.57□□□□□ -2.5
PCM1-208ENST00000518877 AP3S2P59780 193 aa-0.57□□□□□ -2.5
PCM1-208ENST00000518877 KRR1Q13601 381 aaKnown RBP-0.57□□□□□ -2.5
PCM1-208ENST00000518877 CCDC122Q5T0U0 273 aa-0.57□□□□□ -2.5
PCM1-208ENST00000518877 C22orf39Q6P5X5 142 aa-0.57□□□□□ -2.5
PCM1-208ENST00000518877 OR6V1Q8N148 313 aa-0.57□□□□□ -2.5
PCM1-208ENST00000518877 DDI1Q8WTU0 396 aa-0.57□□□□□ -2.5
PCM1-208ENST00000518877 POP5Q969H6 163 aaKnown RBP-0.57□□□□□ -2.5
PCM1-208ENST00000518877 LINC00467Q9BRT7 94 aa-0.57□□□□□ -2.5
PCM1-208ENST00000518877 OPTCQ9UBM4 332 aa-0.57□□□□□ -2.5
PCM1-208ENST00000518877 NOSIPQ9Y314 301 aaKnown RBP-0.57□□□□□ -2.5
PCM1-208ENST00000518877 PRELID3BQ9Y3B1 194 aa-0.57□□□□□ -2.5
PCM1-208ENST00000518877 ANKRD17O75179 2603 aaKnown RBP-0.57□□□□□ -2.5
PCM1-208ENST00000518877 DOCK4Q8N1I0 1966 aa-0.57□□□□□ -2.5
PCM1-208ENST00000518877 TRGV10A0A0A0MS01 117 aa-0.58□□□□□ -2.5
PCM1-208ENST00000518877 M0R233 179 aa-0.58□□□□□ -2.5
PCM1-208ENST00000518877 KPNA3O00505 521 aaPredicted RBP-0.58□□□□□ -2.5
PCM1-208ENST00000518877 TPM3P06753 285 aa-0.58□□□□□ -2.5
PCM1-208ENST00000518877 PIGPP57054 158 aa-0.58□□□□□ -2.5
PCM1-208ENST00000518877 FXYD6P3P58550 94 aa-0.58□□□□□ -2.5
PCM1-208ENST00000518877 RRN3P1Q2M238 152 aa-0.58□□□□□ -2.5
PCM1-208ENST00000518877 C10orf99Q6UWK7 81 aa-0.58□□□□□ -2.5
PCM1-208ENST00000518877 PATE2Q6UY27 113 aa-0.58□□□□□ -2.5
PCM1-208ENST00000518877 OR5AS1Q8N127 324 aa-0.58□□□□□ -2.5
PCM1-208ENST00000518877 RMND5BQ96G75 393 aaPredicted RBP-0.58□□□□□ -2.5
PCM1-208ENST00000518877 NKIRAS1Q9NYS0 192 aa-0.58□□□□□ -2.5
PCM1-208ENST00000518877 GLTPQ9NZD2 209 aa-0.58□□□□□ -2.5
PCM1-208ENST00000518877 CHD9Q3L8U1 2897 aa-0.58□□□□□ -2.5
PCM1-208ENST00000518877 AHCTF1Q8WYP5 2266 aa-0.58□□□□□ -2.5
PCM1-208ENST00000518877 LRP2P98164 4655 aa-0.58□□□□□ -2.5
PCM1-208ENST00000518877 OR7C1O76099 320 aaPredicted RBP-0.59□□□□□ -2.5
PCM1-208ENST00000518877 LYPLA2O95372 231 aa-0.59□□□□□ -2.5
PCM1-208ENST00000518877 Q5BKY6 102 aa-0.59□□□□□ -2.5
PCM1-208ENST00000518877 OR10AG1Q8NH19 301 aa-0.59□□□□□ -2.5
PCM1-208ENST00000518877 BORCS7Q96B45 105 aa-0.59□□□□□ -2.5
PCM1-208ENST00000518877 MUCL1Q96DR8 90 aa-0.59□□□□□ -2.5
PCM1-208ENST00000518877 KIFC1Q9BW19 673 aa-0.59□□□□□ -2.5
PCM1-208ENST00000518877 RNF11Q9Y3C5 154 aa-0.59□□□□□ -2.5
PCM1-208ENST00000518877 ZFYVE9O95405 1425 aa-0.59□□□□□ -2.5
PCM1-208ENST00000518877 ERBINQ96RT1 1412 aa-0.59□□□□□ -2.5
PCM1-208ENST00000518877 STAB1Q9NY15 2570 aa-0.6□□□□□ -2.51
PCM1-208ENST00000518877 PIK3C2GO75747 1445 aa-0.6□□□□□ -2.51
PCM1-208ENST00000518877 TRAV4A0A0B4J268 109 aa-0.6□□□□□ -2.51
PCM1-208ENST00000518877 C9orf170A2RU37 121 aa-0.6□□□□□ -2.51
PCM1-208ENST00000518877 TMEM256-PLSCR3K7ERE1 68 aa-0.6□□□□□ -2.51
PCM1-208ENST00000518877 TAX1BP3O14907 124 aa-0.6□□□□□ -2.51
PCM1-208ENST00000518877 PDE6DO43924 150 aa-0.6□□□□□ -2.51
PCM1-208ENST00000518877 RANP62826 216 aaKnown RBP-0.6□□□□□ -2.51
PCM1-208ENST00000518877 TPM4P67936 248 aa-0.6□□□□□ -2.51
PCM1-208ENST00000518877 TMED1Q13445 227 aa-0.6□□□□□ -2.51
PCM1-208ENST00000518877 IMPG1Q17R60 797 aa-0.6□□□□□ -2.51
PCM1-208ENST00000518877 OR51A2Q8NGJ7 313 aa-0.6□□□□□ -2.51
PCM1-208ENST00000518877 CMSS1Q9BQ75 279 aaKnown RBP-0.6□□□□□ -2.51
PCM1-208ENST00000518877 NUP98P52948 1817 aa-0.6□□□□□ -2.51
PCM1-208ENST00000518877 BCORL1Q5H9F3 1711 aa-0.61□□□□□ -2.51
PCM1-208ENST00000518877 HSPG2P98160 4391 aa-0.61□□□□□ -2.51
PCM1-208ENST00000518877 MYLKQ15746 1914 aa-0.61□□□□□ -2.51
PCM1-208ENST00000518877 J3QRK9 145 aa-0.61□□□□□ -2.51
PCM1-208ENST00000518877 ATP5G3P48201 142 aa-0.61□□□□□ -2.51
PCM1-208ENST00000518877 RPL37AP61513 92 aaKnown RBP-0.61□□□□□ -2.51
PCM1-208ENST00000518877 ARPINQ7Z6K5 226 aa-0.61□□□□□ -2.51
PCM1-208ENST00000518877 ZNF431Q8TF32 576 aaPredicted RBP-0.61□□□□□ -2.51
PCM1-208ENST00000518877 NPCDR1Q9BY65 106 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms