RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 ANKRD20A5PA0PJZ0 165 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 MAP1LC3B2A6NCE7 125 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 LINC00473A8K010 186 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 J3QR89 54 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 MPPED1O15442 326 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 OR7C2O60412 319 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 PRAF2O60831 178 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 NAPSAO96009 420 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 IL6RP08887 468 aaPredicted RBP4.39□□□□□ -1.71
PABPC1-207ENST00000518716 MYL9P24844 172 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 FGF9P31371 208 aaPredicted RBP4.39□□□□□ -1.71
PABPC1-207ENST00000518716 SNRPGP62308 76 aaKnown RBP4.39□□□□□ -1.71
PABPC1-207ENST00000518716 DEFB135Q30KP9 77 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 SCGB2B2Q4G0G5 96 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 ACTL10Q5JWF8 245 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 OR4A47Q6IF82 309 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 BTNL8Q6UX41 500 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 PDPNQ86YL7 162 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 OR5A1Q8NGJ0 315 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 OR52I1Q8NGK6 324 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 ABHD14BQ96IU4 210 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 MAP1LC3BQ9GZQ8 125 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 KCNIP1Q9NZI2 227 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 DOK5Q9P104 306 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 OR1A1Q9P1Q5 309 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 PSORS1C1Q9UIG5 152 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 HSPB8Q9UJY1 196 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 PSG8Q9UQ74 426 aa4.39□□□□□ -1.71
PABPC1-207ENST00000518716 FAT1Q14517 4588 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 TRBV6-6A0A0A6YYG2 114 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 TRBV5-5A0A0J9YX44 114 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 FAM223BA6NKX1 122 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 IFITM5A6NNB3 132 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 PDCD6O75340 191 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 UPK1BO75841 260 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 CD2P06729 351 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 OR9G9P0C7N8 305 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 NKX2-1P43699 371 aaPredicted RBP4.38□□□□□ -1.71
PABPC1-207ENST00000518716 APOC4P55056 127 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 OR10A3P58181 314 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 NANOS2P60321 138 aaKnown RBP4.38□□□□□ -1.71
PABPC1-207ENST00000518716 RPS11P62280 158 aaKnown RBP eCLIP4.38□□□□□ -1.71
PABPC1-207ENST00000518716 RPS28P62857 69 aaKnown RBP4.38□□□□□ -1.71
PABPC1-207ENST00000518716 RHOGP84095 191 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 FABP9Q0Z7S8 132 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 TAL2Q16559 108 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 IAH1Q2TAA2 248 aaPredicted RBP4.38□□□□□ -1.71
PABPC1-207ENST00000518716 ZNF57Q68EA5 555 aaPredicted RBP4.38□□□□□ -1.71
PABPC1-207ENST00000518716 XAF1Q6GPH4 301 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 GLIPR1L1Q6UWM5 242 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 TMUB2Q71RG4 321 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 FAM223AQ8IWN6 122 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 TTC9CQ8N5M4 171 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 OR10G4Q8NGN3 311 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 OR13C8Q8NGS7 320 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 ZNRF2Q8NHG8 242 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 GPR148Q8TDV2 347 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 DYNLRB2Q8TF09 96 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 CYGBQ8WWM9 190 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 BAALCQ8WXS3 180 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 TMEM37Q8WXS4 190 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 UHRF2Q96PU4 802 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 S100A13Q99584 98 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 GINS4Q9BRT9 223 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 MARVELD1Q9BSK0 173 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 THTPAQ9BU02 230 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 SNHG12Q9BXW3 62 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 ACTR3CQ9C0K3 210 aaPredicted RBP4.38□□□□□ -1.71
PABPC1-207ENST00000518716 C11orf68Q9H3H3 251 aaKnown RBP4.38□□□□□ -1.71
PABPC1-207ENST00000518716 MAP1LC3AQ9H492 121 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 LYRM2Q9NU23 88 aaPredicted RBP4.38□□□□□ -1.71
PABPC1-207ENST00000518716 MRPL16Q9NX20 251 aaKnown RBP4.38□□□□□ -1.71
PABPC1-207ENST00000518716 SELENOKQ9Y6D0 94 aa4.38□□□□□ -1.71
PABPC1-207ENST00000518716 TRBV5-7A0A0A0MS05 114 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 TMEM189A5PLL7 270 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 RBFOX2O43251 390 aaKnown RBP eCLIP4.37□□□□□ -1.71
PABPC1-207ENST00000518716 CDS2O95674 445 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 GCGP01275 180 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 IGLV2-14P01704 120 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 PRH1P02810 166 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 LIMS3P0CW19 117 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 LIMS4P0CW20 117 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 MGMTP16455 207 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 TCL1AP56279 114 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 TAS2R30P59541 319 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 SUMO2P61956 95 aaKnown RBP4.37□□□□□ -1.71
PABPC1-207ENST00000518716 ATP5G2Q06055 141 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 OR5I1Q13606 314 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 IZUMO4Q1ZYL8 232 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 ODF3L2Q3SX64 289 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 FAM90A2PQ658T7 463 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 FAM19A5Q7Z5A7 132 aaPredicted RBP4.37□□□□□ -1.71
PABPC1-207ENST00000518716 BEST4Q8NFU0 473 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 OR51S1Q8NGJ8 323 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 C2CD4CQ8TF44 421 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 GPR82Q96P67 336 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 TP53RKQ96S44 253 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 ZNF471Q9BX82 626 aaPredicted RBP4.37□□□□□ -1.71
PABPC1-207ENST00000518716 SPANXDQ9BXN6 97 aa4.37□□□□□ -1.71
PABPC1-207ENST00000518716 SELENOIQ9C0D9 397 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms