RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 KIF13BQ9NQT8 1826 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 TECTAO75443 2155 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 NBPF19A0A087WUL8 3843 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 FREM2Q5SZK8 3169 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 PIK3C2GO75747 1445 aa0.63□□□□□ -2.31
SKP1-203ENST00000517625 ARAP1Q96P48 1450 aa0.62□□□□□ -2.31
SKP1-203ENST00000517625 MYOFQ9NZM1 2061 aa0.62□□□□□ -2.31
SKP1-203ENST00000517625 OR7C1O76099 320 aaPredicted RBP0.62□□□□□ -2.31
SKP1-203ENST00000517625 LYPLA2O95372 231 aa0.62□□□□□ -2.31
SKP1-203ENST00000517625 EIF5AP63241 154 aaKnown RBP0.62□□□□□ -2.31
SKP1-203ENST00000517625 MPV17LQ2QL34 196 aa0.62□□□□□ -2.31
SKP1-203ENST00000517625 OR52L1Q8NGH7 329 aa0.62□□□□□ -2.31
SKP1-203ENST00000517625 GNPDA2Q8TDQ7 276 aa0.62□□□□□ -2.31
SKP1-203ENST00000517625 ADAT3Q96EY9 351 aaPredicted RBP0.62□□□□□ -2.31
SKP1-203ENST00000517625 YPEL2Q96QA6 119 aa0.62□□□□□ -2.31
SKP1-203ENST00000517625 RNASE7Q9H1E1 156 aaKnown RBP0.62□□□□□ -2.31
SKP1-203ENST00000517625 TLNRD1Q9H1K6 362 aa0.62□□□□□ -2.31
SKP1-203ENST00000517625 C14orf105Q9NVL8 296 aa0.62□□□□□ -2.31
SKP1-203ENST00000517625 V9GYY5 206 aaPredicted RBP0.62□□□□□ -2.31
SKP1-203ENST00000517625 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.62□□□□□ -2.313e-6■□□□□ 10.9
SKP1-203ENST00000517625 ARFGEF3Q5TH69 2177 aa0.62□□□□□ -2.31
SKP1-203ENST00000517625 RBBP6Q7Z6E9 1792 aaKnown RBP0.61□□□□□ -2.31
SKP1-203ENST00000517625 TRGV10A0A0A0MS01 117 aa0.61□□□□□ -2.31
SKP1-203ENST00000517625 ZNF736B4DX44 427 aaPredicted RBP0.61□□□□□ -2.31
SKP1-203ENST00000517625 CYB5BO43169 146 aa0.61□□□□□ -2.31
SKP1-203ENST00000517625 DHFRP00374 187 aa0.61□□□□□ -2.31
SKP1-203ENST00000517625 DEFA1P59665 94 aa0.61□□□□□ -2.31
SKP1-203ENST00000517625 OR11H6Q8NGC7 330 aa0.61□□□□□ -2.31
SKP1-203ENST00000517625 SLC25A40Q8TBP6 338 aa0.61□□□□□ -2.31
SKP1-203ENST00000517625 C6orf62Q9GZU0 229 aaPredicted RBP0.61□□□□□ -2.31
SKP1-203ENST00000517625 UTP11Q9Y3A2 253 aaKnown RBP0.61□□□□□ -2.31
SKP1-203ENST00000517625 FMN1Q68DA7 1419 aa0.61□□□□□ -2.31
SKP1-203ENST00000517625 DMXL2Q8TDJ6 3036 aa0.61□□□□□ -2.31
SKP1-203ENST00000517625 TRBV19A0A075B6N1 114 aa0.6□□□□□ -2.31
SKP1-203ENST00000517625 TMEM114B3SHH9 223 aa0.6□□□□□ -2.31
SKP1-203ENST00000517625 SMIM17P0DL12 118 aa0.6□□□□□ -2.31
SKP1-203ENST00000517625 SRP14P37108 136 aaKnown RBP0.6□□□□□ -2.31
SKP1-203ENST00000517625 RHOBP62745 196 aa0.6□□□□□ -2.31
SKP1-203ENST00000517625 TEX261Q6UWH6 196 aa0.6□□□□□ -2.31
SKP1-203ENST00000517625 LINC00301Q8NCQ3 95 aa0.6□□□□□ -2.31
SKP1-203ENST00000517625 WFDC5Q8TCV5 224 aa0.6□□□□□ -2.31
SKP1-203ENST00000517625 GPER1Q99527 375 aa0.6□□□□□ -2.31
SKP1-203ENST00000517625 KIFC1Q9BW19 673 aa0.6□□□□□ -2.31
SKP1-203ENST00000517625 IMUPQ9GZP8 106 aa0.6□□□□□ -2.31
SKP1-203ENST00000517625 BCL2L10Q9HD36 194 aa0.6□□□□□ -2.31
SKP1-203ENST00000517625 U3KQ87 197 aa0.6□□□□□ -2.31
SKP1-203ENST00000517625 HEATR5BQ9P2D3 2071 aa0.6□□□□□ -2.31
SKP1-203ENST00000517625 FRYQ5TBA9 3013 aa0.59□□□□□ -2.31
SKP1-203ENST00000517625 CUBNO60494 3623 aa0.59□□□□□ -2.31
SKP1-203ENST00000517625 ZFYVE9O95405 1425 aa0.59□□□□□ -2.31
SKP1-203ENST00000517625 DMXL1Q9Y485 3027 aa0.59□□□□□ -2.31
SKP1-203ENST00000517625 A8MWV9 139 aa0.59□□□□□ -2.31
SKP1-203ENST00000517625 E2F6O75461 281 aa0.59□□□□□ -2.31
SKP1-203ENST00000517625 ERP29P30040 261 aaKnown RBP0.59□□□□□ -2.31
SKP1-203ENST00000517625 MYL6P60660 151 aa0.59□□□□□ -2.31
SKP1-203ENST00000517625 RRN3P1Q2M238 152 aa0.59□□□□□ -2.31
SKP1-203ENST00000517625 DEFB113Q30KQ7 82 aa0.59□□□□□ -2.31
SKP1-203ENST00000517625 TMEM254Q8TBM7 123 aa0.59□□□□□ -2.31
SKP1-203ENST00000517625 SLAMF6Q96DU3 332 aa0.59□□□□□ -2.31
SKP1-203ENST00000517625 AMELYQ99218 206 aa0.59□□□□□ -2.31
SKP1-203ENST00000517625 SIGMAR1Q99720 223 aa0.59□□□□□ -2.31
SKP1-203ENST00000517625 PRADC1Q9BSG0 188 aa0.59□□□□□ -2.31
SKP1-203ENST00000517625 CDC42SE1Q9NRR8 79 aa0.59□□□□□ -2.31
SKP1-203ENST00000517625 TOP2BQ02880 1626 aa0.59□□□□□ -2.32
SKP1-203ENST00000517625 POLEQ07864 2286 aa0.59□□□□□ -2.32
SKP1-203ENST00000517625 HEATR5AQ86XA9 2040 aa0.59□□□□□ -2.32
SKP1-203ENST00000517625 SYNJ1O43426 1573 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 ANAPC1Q9H1A4 1944 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 KDM6AO15550 1401 aaPredicted RBP0.58□□□□□ -2.32
SKP1-203ENST00000517625 TRAV3A0A0B4J244 114 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 TRAV4A0A0B4J268 109 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 CCDC160A6NGH7 325 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 C1orf196B1AJZ1 125 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 S100A6P06703 90 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 CTXN2P0C2S0 81 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 RNASE4P34096 147 aaKnown RBP0.58□□□□□ -2.32
SKP1-203ENST00000517625 ERVS71-1P61550 626 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 FADDQ13158 208 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 KRR1Q13601 381 aaKnown RBP0.58□□□□□ -2.32
SKP1-203ENST00000517625 LIN52Q52LA3 116 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 FAM74A1Q5RGS3 127 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 C22orf39Q6P5X5 142 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 C2orf82Q6UX34 121 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 SLC30A7Q8NEW0 376 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 PATE1Q8WXA2 126 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 BORCS5Q969J3 196 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 TMEM126AQ9H061 195 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 UBAP1Q9NZ09 502 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 CHCHD2Q9Y6H1 151 aaPredicted RBP0.58□□□□□ -2.32
SKP1-203ENST00000517625 XIRP1Q702N8 1843 aaKnown RBP0.58□□□□□ -2.32
SKP1-203ENST00000517625 F8P00451 2351 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 PRUNE2Q8WUY3 3088 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 APC2O95996 2303 aa0.58□□□□□ -2.32
SKP1-203ENST00000517625 TNS3Q68CZ2 1445 aa0.57□□□□□ -2.32
SKP1-203ENST00000517625 TCRBV4S1A1TA0A5B7 111 aa0.57□□□□□ -2.32
SKP1-203ENST00000517625 CCL16O15467 120 aa0.57□□□□□ -2.32
SKP1-203ENST00000517625 NUPR1O60356 82 aa0.57□□□□□ -2.32
SKP1-203ENST00000517625 PIGPP57054 158 aa0.57□□□□□ -2.32
SKP1-203ENST00000517625 DYNLT1P63172 113 aa0.57□□□□□ -2.32
SKP1-203ENST00000517625 MYL5Q02045 173 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms