RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 C12orf74Q32Q52 190 aa9.84□□□□□ -0.83
TCOF1-215ENST00000515516 TMEM14EPQ6UXP3 125 aa9.84□□□□□ -0.83
TCOF1-215ENST00000515516 GSG1LQ6UXU4 331 aa9.84□□□□□ -0.83
TCOF1-215ENST00000515516 ZNF767PQ75MW2 155 aa9.84□□□□□ -0.83
TCOF1-215ENST00000515516 ZBTB8BQ8NAP8 495 aaPredicted RBP9.84□□□□□ -0.83
TCOF1-215ENST00000515516 LRRC20Q8TCA0 184 aa9.84□□□□□ -0.83
TCOF1-215ENST00000515516 RNF126Q9BV68 326 aa9.84□□□□□ -0.83
TCOF1-215ENST00000515516 SLC25A39Q9BZJ4 359 aaPredicted RBP9.84□□□□□ -0.83
TCOF1-215ENST00000515516 SLC35B3Q9H1N7 401 aa9.84□□□□□ -0.83
TCOF1-215ENST00000515516 C20orf85Q9H1P6 137 aa9.84□□□□□ -0.83
TCOF1-215ENST00000515516 CELA1Q9UNI1 258 aa9.84□□□□□ -0.83
TCOF1-215ENST00000515516 EPPK1P58107 5090 aaKnown RBP9.84□□□□□ -0.83
TCOF1-215ENST00000515516 TEX48A0A1B0GUV7 120 aa9.83□□□□□ -0.84
TCOF1-215ENST00000515516 ZNF705FA8MVS1 300 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-215ENST00000515516 FNDC10F2Z333 226 aa9.83□□□□□ -0.84
TCOF1-215ENST00000515516 L7N2F9 121 aa9.83□□□□□ -0.84
TCOF1-215ENST00000515516 LYRM1O43325 122 aa9.83□□□□□ -0.84
TCOF1-215ENST00000515516 DUSP14O95147 198 aaKnown RBP9.83□□□□□ -0.84
TCOF1-215ENST00000515516 HBE1P02100 147 aa9.83□□□□□ -0.84
TCOF1-215ENST00000515516 ZNF705DP0CH99 300 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-215ENST00000515516 ZNF705BP0CI00 300 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-215ENST00000515516 VAMP2P63027 116 aa9.83□□□□□ -0.84
TCOF1-215ENST00000515516 TEPPQ6URK8 271 aa9.83□□□□□ -0.84
TCOF1-215ENST00000515516 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.83□□□□□ -0.84
TCOF1-215ENST00000515516 ZNF709Q8N972 641 aa9.83□□□□□ -0.84
TCOF1-215ENST00000515516 C20orf173Q96LM9 149 aa9.83□□□□□ -0.84
TCOF1-215ENST00000515516 SHANK2-AS3Q9BTD1 123 aa9.83□□□□□ -0.84
TCOF1-215ENST00000515516 TMEM208Q9BTX3 173 aa9.83□□□□□ -0.84
TCOF1-215ENST00000515516 SCRT1Q9BWW7 348 aa9.83□□□□□ -0.84
TCOF1-215ENST00000515516 PMS2P5A8MQ11 134 aa9.82□□□□□ -0.84
TCOF1-215ENST00000515516 FAM25EA8MYX2 175 aa9.82□□□□□ -0.84
TCOF1-215ENST00000515516 H3BRN7 92 aa9.82□□□□□ -0.84
TCOF1-215ENST00000515516 GOSR2O14653 212 aa9.82□□□□□ -0.84
TCOF1-215ENST00000515516 AMBPP02760 352 aa9.82□□□□□ -0.84
TCOF1-215ENST00000515516 PLP1P60201 277 aa9.82□□□□□ -0.84
TCOF1-215ENST00000515516 ARL6Q9H0F7 186 aa9.82□□□□□ -0.84
TCOF1-215ENST00000515516 C5orf51A6NDU8 294 aa9.81□□□□□ -0.84
TCOF1-215ENST00000515516 PLA2G10O15496 165 aa9.81□□□□□ -0.84
TCOF1-215ENST00000515516 CCNKO75909 580 aa9.81□□□□□ -0.84
TCOF1-215ENST00000515516 MBPP02686 304 aaPredicted RBP9.81□□□□□ -0.84
TCOF1-215ENST00000515516 TCRBP04435 133 aa9.81□□□□□ -0.84
TCOF1-215ENST00000515516 BCAP31P51572 246 aa9.81□□□□□ -0.84
TCOF1-215ENST00000515516 RRN3P1Q2M238 152 aa9.81□□□□□ -0.84
TCOF1-215ENST00000515516 PXDC1Q5TGL8 231 aa9.81□□□□□ -0.84
TCOF1-215ENST00000515516 ZNF546Q86UE3 836 aa9.81□□□□□ -0.84
TCOF1-215ENST00000515516 ZNF738Q8NE65 137 aa9.81□□□□□ -0.84
TCOF1-215ENST00000515516 NDUFAF3Q9BU61 184 aa9.81□□□□□ -0.84
TCOF1-215ENST00000515516 GGACTQ9BVM4 153 aa9.81□□□□□ -0.84
TCOF1-215ENST00000515516 PPP1R14DQ9NXH3 145 aa9.81□□□□□ -0.84
TCOF1-215ENST00000515516 RCL1Q9Y2P8 373 aaKnown RBP9.81□□□□□ -0.84
TCOF1-215ENST00000515516 TRAV6A0A075B6T7 132 aa9.8□□□□□ -0.84
TCOF1-215ENST00000515516 CNN1P51911 297 aaKnown RBP9.8□□□□□ -0.84
TCOF1-215ENST00000515516 PRR20EP86478 221 aa9.8□□□□□ -0.84
TCOF1-215ENST00000515516 PRR20CP86479 221 aa9.8□□□□□ -0.84
TCOF1-215ENST00000515516 PRR20DP86480 221 aa9.8□□□□□ -0.84
TCOF1-215ENST00000515516 PRR20BP86481 221 aa9.8□□□□□ -0.84
TCOF1-215ENST00000515516 PRR20AP86496 221 aa9.8□□□□□ -0.84
TCOF1-215ENST00000515516 SLC38A11Q08AI6 406 aa9.8□□□□□ -0.84
TCOF1-215ENST00000515516 RAB31Q13636 194 aa9.8□□□□□ -0.84
TCOF1-215ENST00000515516 IGFL4Q6B9Z1 124 aa9.8□□□□□ -0.84
TCOF1-215ENST00000515516 IGF2BP2-AS1Q96M15 143 aa9.8□□□□□ -0.84
TCOF1-215ENST00000515516 NIPSNAP3BQ9BS92 247 aa9.8□□□□□ -0.84
TCOF1-215ENST00000515516 ARV1Q9H2C2 271 aa9.8□□□□□ -0.84
TCOF1-215ENST00000515516 LSM5Q9Y4Y9 91 aaKnown RBP9.8□□□□□ -0.84
TCOF1-215ENST00000515516 AGRNO00468 2067 aa9.79□□□□□ -0.84
TCOF1-215ENST00000515516 BIRC6Q9NR09 4857 aa9.79□□□□□ -0.84
TCOF1-215ENST00000515516 TRAV8-2A0A0B4J237 113 aa9.79□□□□□ -0.84
TCOF1-215ENST00000515516 LOC102723971A0A1B0GUV8 181 aa9.79□□□□□ -0.84
TCOF1-215ENST00000515516 C7orf66A4D0T2 115 aa9.79□□□□□ -0.84
TCOF1-215ENST00000515516 K7EPK0 472 aa9.79□□□□□ -0.84
TCOF1-215ENST00000515516 CCSO14618 274 aa9.79□□□□□ -0.84
TCOF1-215ENST00000515516 PVALBP20472 110 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-215ENST00000515516 RHOBP62745 196 aa9.79□□□□□ -0.84
TCOF1-215ENST00000515516 FAM222AQ5U5X8 452 aa9.79□□□□□ -0.84
TCOF1-215ENST00000515516 C1orf158Q8N1D5 194 aa9.79□□□□□ -0.84
TCOF1-215ENST00000515516 RNF182Q8N6D2 247 aa9.79□□□□□ -0.84
TCOF1-215ENST00000515516 ZNF431Q8TF32 576 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-215ENST00000515516 C17orf77Q96MU5 243 aa9.79□□□□□ -0.84
TCOF1-215ENST00000515516 UHRF2Q96PU4 802 aa9.79□□□□□ -0.84
TCOF1-215ENST00000515516 CCDC32Q9BV29 185 aa9.79□□□□□ -0.84
TCOF1-215ENST00000515516 NUDT15Q9NV35 164 aa9.79□□□□□ -0.84
TCOF1-215ENST00000515516 DKK2Q9UBU2 259 aa9.79□□□□□ -0.84
TCOF1-215ENST00000515516 A8MTW9 85 aa9.78□□□□□ -0.84
TCOF1-215ENST00000515516 AGPAT2O15120 278 aa9.78□□□□□ -0.84
TCOF1-215ENST00000515516 COX7A2P2O60397 106 aa9.78□□□□□ -0.84
TCOF1-215ENST00000515516 INSP01308 110 aa9.78□□□□□ -0.84
TCOF1-215ENST00000515516 H2AFB2P0C5Z0 115 aa9.78□□□□□ -0.84
TCOF1-215ENST00000515516 P0DMU3 169 aa9.78□□□□□ -0.84
TCOF1-215ENST00000515516 FAM231AP0DMU4 169 aa9.78□□□□□ -0.84
TCOF1-215ENST00000515516 FAM231CP0DMU5 169 aa9.78□□□□□ -0.84
TCOF1-215ENST00000515516 CAV2P51636 162 aa9.78□□□□□ -0.84
TCOF1-215ENST00000515516 B2MP61769 119 aa9.78□□□□□ -0.84
TCOF1-215ENST00000515516 MZT2BQ6NZ67 158 aa9.78□□□□□ -0.84
TCOF1-215ENST00000515516 C12orf45Q8N5I9 185 aaPredicted RBP9.78□□□□□ -0.84
TCOF1-215ENST00000515516 OR11H7Q8NGC8 314 aa9.78□□□□□ -0.84
TCOF1-215ENST00000515516 SEC22CQ9BRL7 303 aa9.78□□□□□ -0.84
TCOF1-215ENST00000515516 A0A087X0K7 114 aa9.77□□□□□ -0.85
TCOF1-215ENST00000515516 FAM240BA0A1B0GVZ2 78 aa9.77□□□□□ -0.85
TCOF1-215ENST00000515516 HTN3P15516 51 aa9.77□□□□□ -0.85
TCOF1-215ENST00000515516 HIST1H1AQ02539 215 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms