RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 PDE6DO43924 150 aa7.05□□□□□ -1.28
CPNE4-213ENST00000515418 SCGB2A1O75556 95 aa7.05□□□□□ -1.28
CPNE4-213ENST00000515418 CRYBB3P26998 211 aa7.05□□□□□ -1.28
CPNE4-213ENST00000515418 TAGLN2P37802 199 aaKnown RBP7.05□□□□□ -1.28
CPNE4-213ENST00000515418 FAM74A3Q4VXF1 159 aa7.05□□□□□ -1.28
CPNE4-213ENST00000515418 AWAT1Q58HT5 328 aa7.05□□□□□ -1.28
CPNE4-213ENST00000515418 TMEM88Q6PEY1 159 aa7.05□□□□□ -1.28
CPNE4-213ENST00000515418 Q6ZSV7 163 aa7.05□□□□□ -1.28
CPNE4-213ENST00000515418 TMEM86BQ8N661 226 aa7.05□□□□□ -1.28
CPNE4-213ENST00000515418 ELOVL1Q9BW60 279 aa7.05□□□□□ -1.28
CPNE4-213ENST00000515418 GAR1Q9NY12 217 aaKnown RBP7.05□□□□□ -1.28
CPNE4-213ENST00000515418 RABAC1Q9UI14 185 aa7.05□□□□□ -1.28
CPNE4-213ENST00000515418 ZNF580Q9UK33 172 aa7.05□□□□□ -1.28
CPNE4-213ENST00000515418 A0A0G2JLM5 398 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 C7orf77A4D0Y5 90 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 PGPEP1LA6NFU8 196 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 INAFM1C9JVW0 142 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 CD99P14209 185 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 TEX38Q6PEX7 206 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 UNQ9165/PRO28630Q6UXU0 137 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 Q8N2B8 174 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 LINC00479Q96M42 142 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 NIPSNAP3BQ9BS92 247 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 A0A1W2PRE2 83 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 ZNF320A2RRD8 509 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 PGPA6NDG6 321 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 BMPR1BO00238 502 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 SLC35B1P78383 322 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 SRSF2Q01130 221 aaKnown RBP7.04□□□□□ -1.28
CPNE4-213ENST00000515418 CBLN2Q8IUK8 224 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 STXBP6Q8NFX7 210 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 RPS10P5Q9NQ39 176 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 TMEM160Q9NX00 188 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 SELENOKQ9Y6D0 94 aa7.04□□□□□ -1.28
CPNE4-213ENST00000515418 TRBV20OR9-2A0A075B6H5 130 aa7.03□□□□□ -1.28
CPNE4-213ENST00000515418 DNASE2O00115 360 aaPredicted RBP7.03□□□□□ -1.28
CPNE4-213ENST00000515418 MRPS12O15235 138 aaKnown RBP7.03□□□□□ -1.28
CPNE4-213ENST00000515418 HIST1H1EP10412 219 aaKnown RBP7.03□□□□□ -1.28
CPNE4-213ENST00000515418 GNG5P63218 68 aa7.03□□□□□ -1.28
CPNE4-213ENST00000515418 RELQ04864 619 aaPredicted RBP7.03□□□□□ -1.28
CPNE4-213ENST00000515418 TMEM241Q24JQ0 296 aa7.03□□□□□ -1.28
CPNE4-213ENST00000515418 C18orf65Q6ZTR6 163 aa7.03□□□□□ -1.28
CPNE4-213ENST00000515418 BPIFA4PQ86YQ2 179 aa7.03□□□□□ -1.28
CPNE4-213ENST00000515418 OR8I2Q8N0Y5 310 aa7.03□□□□□ -1.28
CPNE4-213ENST00000515418 EXOC3-AS1Q8N2X6 119 aa7.03□□□□□ -1.28
CPNE4-213ENST00000515418 KLHDC1Q8N7A1 406 aa7.03□□□□□ -1.28
CPNE4-213ENST00000515418 TVP23CQ96ET8 276 aa7.03□□□□□ -1.28
CPNE4-213ENST00000515418 TXNDC17Q9BRA2 123 aa7.03□□□□□ -1.28
CPNE4-213ENST00000515418 SDF2L1Q9HCN8 221 aa7.03□□□□□ -1.28
CPNE4-213ENST00000515418 TMEM14CQ9P0S9 112 aa7.03□□□□□ -1.28
CPNE4-213ENST00000515418 SMAD5-AS1Q9Y6J3 95 aa7.03□□□□□ -1.28
CPNE4-213ENST00000515418 C2CD3Q4AC94 2353 aa7.03□□□□□ -1.28
CPNE4-213ENST00000515418 F6UZH7 168 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 SLC17A3O00476 420 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 IGLC2P0DOY2 106 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 MYCNOSP40205 109 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 FOXE3Q13461 319 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 TCTEX1D4Q5JR98 221 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 SGK494Q96LW2 274 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 PEF1Q9UBV8 284 aaKnown RBP7.02□□□□□ -1.29
CPNE4-213ENST00000515418 CDC42EP3Q9UKI2 254 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 RPH3ALQ9UNE2 315 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 SORL1Q92673 2214 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 TRAV34A0A0B4J273 112 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 BUB3O43684 328 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 CRYBA1P05813 215 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 EDN2P20800 178 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 RPL35P42766 123 aaKnown RBP7.02□□□□□ -1.29
CPNE4-213ENST00000515418 ADIRFQ15847 76 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 IGFL4Q6B9Z1 124 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 C11orf44Q8N8P7 122 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 OR4F17Q8NGA8 305 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 ZNF418Q8TF45 676 aaPredicted RBP7.02□□□□□ -1.29
CPNE4-213ENST00000515418 ATP6V0BQ99437 205 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 Q9H3A6 140 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 NAT8Q9UHE5 227 aa7.02□□□□□ -1.29
CPNE4-213ENST00000515418 TRBV19A0A075B6N1 114 aa7.01□□□□□ -1.29
CPNE4-213ENST00000515418 TMEM89A2RUT3 159 aa7.01□□□□□ -1.29
CPNE4-213ENST00000515418 HELTA6NFD8 242 aa7.01□□□□□ -1.29
CPNE4-213ENST00000515418 CYSRT1A8MQ03 144 aa7.01□□□□□ -1.29
CPNE4-213ENST00000515418 GGCTO75223 188 aaKnown RBP7.01□□□□□ -1.29
CPNE4-213ENST00000515418 SLC25A5P05141 298 aaKnown RBP7.01□□□□□ -1.29
CPNE4-213ENST00000515418 ELANEP08246 267 aa7.01□□□□□ -1.29
CPNE4-213ENST00000515418 RPL23P62829 140 aaKnown RBP7.01□□□□□ -1.29
CPNE4-213ENST00000515418 TM4SF20Q53R12 229 aa7.01□□□□□ -1.29
CPNE4-213ENST00000515418 OCC1Q8TAD7 63 aa7.01□□□□□ -1.29
CPNE4-213ENST00000515418 C2CD4CQ8TF44 421 aa7.01□□□□□ -1.29
CPNE4-213ENST00000515418 METTL26Q96S19 204 aa7.01□□□□□ -1.29
CPNE4-213ENST00000515418 EPDR1Q9UM22 224 aa7.01□□□□□ -1.29
CPNE4-213ENST00000515418 ARL2-SNX15V9GYD0 113 aa7.01□□□□□ -1.29
CPNE4-213ENST00000515418 CLDN34H7C241 214 aa7□□□□□ -1.29
CPNE4-213ENST00000515418 NDUFA4O00483 81 aa7□□□□□ -1.29
CPNE4-213ENST00000515418 RNASE1P07998 156 aaKnown RBP7□□□□□ -1.29
CPNE4-213ENST00000515418 HILS1P60008 231 aa7□□□□□ -1.29
CPNE4-213ENST00000515418 DEFB136Q30KP8 78 aa7□□□□□ -1.29
CPNE4-213ENST00000515418 S100A7AQ86SG5 101 aa7□□□□□ -1.29
CPNE4-213ENST00000515418 C11orf52Q96A22 123 aa7□□□□□ -1.29
CPNE4-213ENST00000515418 ISOC2Q96AB3 205 aa7□□□□□ -1.29
CPNE4-213ENST00000515418 NDUFS6O75380 124 aaKnown RBP7□□□□□ -1.29
CPNE4-213ENST00000515418 RPL7P18124 248 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms