RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 HLA-DRB4P13762 266 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 RUSC1-AS1Q66K80 236 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 ZNF705AQ6ZN79 300 aaPredicted RBP5.87□□□□□ -1.47
CLIP1-205ENST00000514271 LCNL1Q6ZST4 164 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 ZNF738Q8NE65 137 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 H1FXQ92522 213 aaKnown RBP5.87□□□□□ -1.47
CLIP1-205ENST00000514271 GCM1Q9NP62 436 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 RBM7Q9Y580 266 aaKnown RBP5.87□□□□□ -1.47
CLIP1-205ENST00000514271 HLA-DRB4X5D2U9 266 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 ICE1Q9Y2F5 2266 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 SNURFLB1AK76 121 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 M0QZ24 198 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 WDR82Q6UXN9 313 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 KRTAP1-3Q8IUG1 177 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 OR1L8Q8NGR8 309 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 LINC01600Q96MT4 127 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 RNASE7Q9H1E1 156 aaKnown RBP5.87□□□□□ -1.47
CLIP1-205ENST00000514271 MS4A6AQ9H2W1 248 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 LOC400499M0QZD8 3231 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 KALRNO60229 2985 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 MRPS12O15235 138 aaKnown RBP5.87□□□□□ -1.47
CLIP1-205ENST00000514271 IER3P46695 156 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 THBS3P49746 956 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 KLK9Q2XQG4 91 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 MIC13Q5XKP0 118 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 OR8I2Q8N0Y5 310 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 OR52L2PQ8NGH6 319 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 PTH2Q96A98 100 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 GRAMD2BQ96HH9 432 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 KLK9Q9UKQ9 250 aa5.87□□□□□ -1.47
CLIP1-205ENST00000514271 DOPEY2Q9Y3R5 2298 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 TMEM89A2RUT3 159 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 OR11H12B2RN74 326 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 B4DSR2 109 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 SYS1-DBNDD2H3BUS1 97 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 LINC00173Q6ZV60 143 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 MIR17HGQ75NE6 70 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 LINC01356Q8N9X3 169 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 TEX45Q8NA69 505 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 OR11H1Q8NG94 326 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 OR13A1Q8NGR1 328 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 OR11H2Q8NH07 326 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 USF3Q68DE3 2245 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 PCNX1Q96RV3 2341 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 RBP4P02753 201 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 COX8AP10176 69 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 LCN12Q6JVE5 192 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 SIGLECL1Q8N7X8 197 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 OR1L4Q8NGR5 311 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 Q96MF0 132 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 NPVFQ9HCQ7 196 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 JPT1Q9UK76 154 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 A0A096LNT2 108 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 HAND1O96004 215 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 IGLV2-23P01705 113 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 ZNF137PP52743 207 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 PRCDQ00LT1 54 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 RTL8BQ17RB0 113 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 SAMD13Q5VXD3 122 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 MRPL32Q9BYC8 188 aaKnown RBP5.86□□□□□ -1.47
CLIP1-205ENST00000514271 PRO0461Q9UI25 63 aa5.86□□□□□ -1.47
CLIP1-205ENST00000514271 SOX21Q9Y651 276 aaPredicted RBP5.86□□□□□ -1.47
CLIP1-205ENST00000514271 IGKV1D-17A0A075B6S4 117 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 MDFIC2A0A1B0GVS7 189 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 GAGE10A6NGK3 116 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 MGST3O14880 152 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 RNASE2P10153 161 aaKnown RBP5.85□□□□□ -1.47
CLIP1-205ENST00000514271 PMCHP20382 165 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 SRIP30626 198 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 VAMP3Q15836 100 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 C8orf31Q8N9H6 132 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 OR4A16Q8NH70 328 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 TEX22C9J3V5 150 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 K7ERU9 68 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 GP9P14770 177 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 GABRA2P47869 451 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 HIST2H2BCQ6DN03 193 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 OR10X1Q8NGY0 326 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 C8orf46Q8TAG6 207 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 NDUFA4L2Q9NRX3 87 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 ZNF586Q9NXT0 402 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 FZR1Q9UM11 496 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 USP9XQ93008 2570 aaPredicted RBP5.85□□□□□ -1.47
CLIP1-205ENST00000514271 ARFGEF3Q5TH69 2177 aa5.85□□□□□ -1.47
CLIP1-205ENST00000514271 WI2-2373I1.2A0A1W2PRP0 233 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 ZNF833PQ6ZTB9 187 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 Q71RC1 249 aaPredicted RBP5.84□□□□□ -1.47
CLIP1-205ENST00000514271 CSMD1Q96PZ7 3565 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.84□□□□□ -1.47
CLIP1-205ENST00000514271 A0A1B0GWB2 263 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 TMEM30CPA0ZSE6 113 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 TMEM213A2RRL7 107 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 OR2T8A6NH00 312 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 ENSAO43768 121 aaKnown RBP5.84□□□□□ -1.47
CLIP1-205ENST00000514271 UBE2G1P62253 170 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 RPL32P62910 135 aaKnown RBP5.84□□□□□ -1.47
CLIP1-205ENST00000514271 CCL8P80075 99 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 PSG9Q00887 426 aa5.84□□□□□ -1.47
CLIP1-205ENST00000514271 MEF2CQ06413 473 aaPredicted RBP5.84□□□□□ -1.47
CLIP1-205ENST00000514271 STUMQ69YW2 141 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms