RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 GCGP01275 180 aa6.5□□□□□ -1.37
RNF4-220ENST00000513578 IGLV1-40P01703 118 aa6.5□□□□□ -1.37
RNF4-220ENST00000513578 ATF4P18848 351 aaPredicted RBP6.5□□□□□ -1.37
RNF4-220ENST00000513578 GNG4P50150 75 aa6.5□□□□□ -1.37
RNF4-220ENST00000513578 CNN1P51911 297 aaKnown RBP6.5□□□□□ -1.37
RNF4-220ENST00000513578 RELQ04864 619 aaPredicted RBP6.5□□□□□ -1.37
RNF4-220ENST00000513578 FOXL1Q12952 345 aa6.5□□□□□ -1.37
RNF4-220ENST00000513578 TMEM183BQ1AE95 376 aa6.5□□□□□ -1.37
RNF4-220ENST00000513578 TEX38Q6PEX7 206 aa6.5□□□□□ -1.37
RNF4-220ENST00000513578 BCL6BQ8N143 479 aaPredicted RBP6.5□□□□□ -1.37
RNF4-220ENST00000513578 OR4F17Q8NGA8 305 aa6.5□□□□□ -1.37
RNF4-220ENST00000513578 CCDC140Q96MF4 163 aa6.5□□□□□ -1.37
RNF4-220ENST00000513578 OR5B12Q96R08 314 aa6.5□□□□□ -1.37
RNF4-220ENST00000513578 CHRDL1Q9BU40 450 aa6.5□□□□□ -1.37
RNF4-220ENST00000513578 ZFAND3Q9H8U3 227 aa6.5□□□□□ -1.37
RNF4-220ENST00000513578 ZNF586Q9NXT0 402 aa6.5□□□□□ -1.37
RNF4-220ENST00000513578 RABAC1Q9UI14 185 aa6.5□□□□□ -1.37
RNF4-220ENST00000513578 F8P00451 2351 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 TRBV19A0A075B6N1 114 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 MDFIC2A0A1B0GVS7 189 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 PGPA6NDG6 321 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 OR2T8A6NH00 312 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 C1orf196B1AJZ1 125 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 BMPR1BO00238 502 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 GGCTO75223 188 aaKnown RBP6.49□□□□□ -1.37
RNF4-220ENST00000513578 IGLV2-8P01709 118 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 TYMSP04818 313 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 CLEC3BP05452 202 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 RPL7P18124 248 aaKnown RBP6.49□□□□□ -1.37
RNF4-220ENST00000513578 S100PP25815 95 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 RAB5BP61020 215 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 RANP62826 216 aaKnown RBP6.49□□□□□ -1.37
RNF4-220ENST00000513578 CENPWQ5EE01 88 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 C1orf194Q5T5A4 169 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 TOMM20LQ6UXN7 152 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 TMEM86BQ8N661 226 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 OR10G8Q8NGN5 311 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 SFRP2Q96HF1 295 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 GPR82Q96P67 336 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 ATG101Q9BSB4 218 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 Q9H3A6 140 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 OSTCQ9NRP0 149 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 MLXQ9UH92 298 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 VPREB3Q9UKI3 123 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 S4R3C0 116 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 U3KQE9 123 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 CSPG4Q6UVK1 2322 aa6.49□□□□□ -1.37
RNF4-220ENST00000513578 NBEAL1Q6ZS30 2694 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 A0A087X0K7 114 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.48□□□□□ -1.37
RNF4-220ENST00000513578 A0A0G2JLM5 398 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 SERTM2A0A1B0GWG4 89 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 K7EN84 100 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 ISLRO14498 428 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 IGHV4-59P01825 116 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 IGHG4P01861 327 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 TRGV3P03979 118 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 TCRAP04437 139 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 SLC25A5P05141 298 aaKnown RBP6.48□□□□□ -1.37
RNF4-220ENST00000513578 CXCL1P09341 107 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 GPR183P32249 361 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 GALR1P47211 349 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 BLCAPP62952 87 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 PSG9Q00887 426 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 C9orf152Q5JTZ5 239 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 LEMD1Q68G75 181 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 KCNIP4Q6PIL6 250 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 CLEC19AQ6UXS0 136 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 SIGLEC15Q6ZMC9 328 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 FAM231DQ6ZW35 169 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 MAPK1IP1LQ8NDC0 245 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 FMC1Q96HJ9 113 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 FAM210BQ96KR6 192 aa6.48□□□□□ -1.37
RNF4-220ENST00000513578 MTORP42345 2549 aa6.47□□□□□ -1.37
RNF4-220ENST00000513578 CELSR2Q9HCU4 2923 aa6.47□□□□□ -1.37
RNF4-220ENST00000513578 TGIF2-C20orf24A0A0A6YYL0 155 aa6.47□□□□□ -1.37
RNF4-220ENST00000513578 CLPSL1A2RUU4 121 aa6.47□□□□□ -1.37
RNF4-220ENST00000513578 PGPEP1LA6NFU8 196 aa6.47□□□□□ -1.37
RNF4-220ENST00000513578 FBLL1A6NHQ2 334 aaKnown RBP6.47□□□□□ -1.37
RNF4-220ENST00000513578 NDUFA4O00483 81 aa6.47□□□□□ -1.37
RNF4-220ENST00000513578 BUB3O43684 328 aa6.47□□□□□ -1.37
RNF4-220ENST00000513578 IGHV3-23P01764 117 aa6.47□□□□□ -1.37
RNF4-220ENST00000513578 MEOX2P50222 304 aa6.47□□□□□ -1.37
RNF4-220ENST00000513578 BLNKQ8WV28 456 aa6.47□□□□□ -1.37
RNF4-220ENST00000513578 MS4A10Q96PG2 267 aa6.47□□□□□ -1.37
RNF4-220ENST00000513578 MLST8Q9BVC4 326 aa6.47□□□□□ -1.37
RNF4-220ENST00000513578 PRSS22Q9GZN4 317 aa6.47□□□□□ -1.37
RNF4-220ENST00000513578 SRD5A3Q9H8P0 318 aa6.47□□□□□ -1.37
RNF4-220ENST00000513578 BIN3Q9NQY0 253 aa6.47□□□□□ -1.37
RNF4-220ENST00000513578 IL36BQ9NZH7 164 aa6.47□□□□□ -1.37
RNF4-220ENST00000513578 CRYBG3Q68DQ2 2970 aa6.47□□□□□ -1.37
RNF4-220ENST00000513578 APCP25054 2843 aa6.46□□□□□ -1.37
RNF4-220ENST00000513578 LTAP01374 205 aa6.46□□□□□ -1.38
RNF4-220ENST00000513578 PSMB8P28062 276 aa6.46□□□□□ -1.38
RNF4-220ENST00000513578 TPPP2P59282 170 aa6.46□□□□□ -1.38
RNF4-220ENST00000513578 UBE2G1P62253 170 aa6.46□□□□□ -1.38
RNF4-220ENST00000513578 Q6ZS46 218 aa6.46□□□□□ -1.38
RNF4-220ENST00000513578 BAGE2Q86Y30 109 aa6.46□□□□□ -1.38
RNF4-220ENST00000513578 Q8N2B8 174 aa6.46□□□□□ -1.38
RNF4-220ENST00000513578 TMEM75Q8N9X5 138 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms