RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 SMIM27A0A1W2PRY6 76 aa9.21□□□□□ -0.93
TCOF1-211ENST00000513346 D6R8Y8 96 aa9.21□□□□□ -0.93
TCOF1-211ENST00000513346 FNDC10F2Z333 226 aa9.21□□□□□ -0.93
TCOF1-211ENST00000513346 PHLDA3Q9Y5J5 127 aa9.21□□□□□ -0.93
TCOF1-211ENST00000513346 K7ENP7 123 aa9.21□□□□□ -0.94
TCOF1-211ENST00000513346 Q0VFX4 171 aa9.21□□□□□ -0.94
TCOF1-211ENST00000513346 GTSCR1Q86UQ5 136 aa9.21□□□□□ -0.94
TCOF1-211ENST00000513346 METTL26Q96S19 204 aa9.21□□□□□ -0.94
TCOF1-211ENST00000513346 MRPL20Q9BYC9 149 aaKnown RBP9.21□□□□□ -0.94
TCOF1-211ENST00000513346 GEMIN7Q9H840 131 aaKnown RBP9.21□□□□□ -0.94
TCOF1-211ENST00000513346 ALPK3Q96L96 1907 aa9.21□□□□□ -0.94
TCOF1-211ENST00000513346 TFF1P04155 84 aa9.21□□□□□ -0.94
TCOF1-211ENST00000513346 YPEL4Q96NS1 127 aa9.21□□□□□ -0.94
TCOF1-211ENST00000513346 ANKRD11Q6UB99 2663 aaPredicted RBP9.21□□□□□ -0.94
TCOF1-211ENST00000513346 ZGRF1Q86YA3 2104 aa9.21□□□□□ -0.94
TCOF1-211ENST00000513346 IGKV3D-15A0A087WSY6 115 aa9.2□□□□□ -0.94
TCOF1-211ENST00000513346 CGB1A6NKQ9 187 aa9.2□□□□□ -0.94
TCOF1-211ENST00000513346 TSPAN13O95857 204 aa9.2□□□□□ -0.94
TCOF1-211ENST00000513346 TCRAP04437 139 aa9.2□□□□□ -0.94
TCOF1-211ENST00000513346 CD300EQ496F6 205 aaPredicted RBP9.2□□□□□ -0.94
TCOF1-211ENST00000513346 TMEM170BQ5T4T1 132 aa9.2□□□□□ -0.94
TCOF1-211ENST00000513346 ZNF462Q96JM2 2506 aa9.2□□□□□ -0.94
TCOF1-211ENST00000513346 EPG5Q9HCE0 2579 aa9.2□□□□□ -0.94
TCOF1-211ENST00000513346 IGLV3-1P01715 115 aa9.2□□□□□ -0.94
TCOF1-211ENST00000513346 AZU1P20160 251 aa9.2□□□□□ -0.94
TCOF1-211ENST00000513346 KLF17Q5JT82 389 aaPredicted RBP9.2□□□□□ -0.94
TCOF1-211ENST00000513346 FAM168AQ92567 244 aa9.2□□□□□ -0.94
TCOF1-211ENST00000513346 TCF15Q12870 199 aa9.2□□□□□ -0.94
TCOF1-211ENST00000513346 ZCCHC24Q8N2G6 241 aaKnown RBP9.2□□□□□ -0.94
TCOF1-211ENST00000513346 PLXNA2O75051 1894 aa9.2□□□□□ -0.94
TCOF1-211ENST00000513346 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.2□□□□□ -0.94
TCOF1-211ENST00000513346 FAM231DQ6ZW35 169 aa9.2□□□□□ -0.94
TCOF1-211ENST00000513346 C16orf92Q96LL3 132 aa9.2□□□□□ -0.94
TCOF1-211ENST00000513346 MBNL3Q9NUK0 354 aaKnown RBP9.2□□□□□ -0.94
TCOF1-211ENST00000513346 GAGE12HA6NDE8 117 aa9.19□□□□□ -0.94
TCOF1-211ENST00000513346 LINC00205P59089 165 aa9.19□□□□□ -0.94
TCOF1-211ENST00000513346 DLX4Q92988 240 aaPredicted RBP9.19□□□□□ -0.94
TCOF1-211ENST00000513346 MRAP2Q96G30 205 aa9.19□□□□□ -0.94
TCOF1-211ENST00000513346 CHAC1Q9BUX1 264 aa9.19□□□□□ -0.94
TCOF1-211ENST00000513346 GFRA4Q9GZZ7 299 aa9.19□□□□□ -0.94
TCOF1-211ENST00000513346 IGHV1-24A0A0C4DH33 117 aa9.19□□□□□ -0.94
TCOF1-211ENST00000513346 HAX1O00165 279 aa9.19□□□□□ -0.94
TCOF1-211ENST00000513346 RAB9AP51151 201 aa9.19□□□□□ -0.94
TCOF1-211ENST00000513346 KIR3DL3Q8N743 410 aa9.19□□□□□ -0.94
TCOF1-211ENST00000513346 A0A1W2PPM0 123 aa9.19□□□□□ -0.94
TCOF1-211ENST00000513346 ETV2O00321 342 aaPredicted RBP9.19□□□□□ -0.94
TCOF1-211ENST00000513346 ADIPOQQ15848 244 aa9.19□□□□□ -0.94
TCOF1-211ENST00000513346 FAM106AQ4KMX7 169 aa9.19□□□□□ -0.94
TCOF1-211ENST00000513346 KIR2DL4Q99706 377 aa9.19□□□□□ -0.94
TCOF1-211ENST00000513346 RSPO1Q2MKA7 263 aaPredicted RBP9.19□□□□□ -0.94
TCOF1-211ENST00000513346 EBLN2Q6P2I7 272 aa9.19□□□□□ -0.94
TCOF1-211ENST00000513346 ZNF329Q86UD4 541 aa9.19□□□□□ -0.94
TCOF1-211ENST00000513346 PSMB11A5LHX3 300 aa9.18□□□□□ -0.94
TCOF1-211ENST00000513346 FABP5P3A8MUU1 101 aa9.18□□□□□ -0.94
TCOF1-211ENST00000513346 K7EN84 100 aa9.18□□□□□ -0.94
TCOF1-211ENST00000513346 VDAC2P45880 294 aaPredicted RBP9.18□□□□□ -0.94
TCOF1-211ENST00000513346 FAM53AQ6NSI3 398 aaPredicted RBP9.18□□□□□ -0.94
TCOF1-211ENST00000513346 PIP4P1Q86T03 277 aa9.18□□□□□ -0.94
TCOF1-211ENST00000513346 C8orf46Q8TAG6 207 aa9.18□□□□□ -0.94
TCOF1-211ENST00000513346 IGHV1-18A0A0C4DH31 117 aa9.18□□□□□ -0.94
TCOF1-211ENST00000513346 IGHV3-35A0A0C4DH35 117 aa9.18□□□□□ -0.94
TCOF1-211ENST00000513346 F8W1H4 67 aa9.18□□□□□ -0.94
TCOF1-211ENST00000513346 TOMM40O96008 361 aa9.18□□□□□ -0.94
TCOF1-211ENST00000513346 SRSF1Q07955 248 aaKnown RBP eCLIP9.18□□□□□ -0.94
TCOF1-211ENST00000513346 ETDBQ3ZM63 59 aa9.18□□□□□ -0.94
TCOF1-211ENST00000513346 OR10J6PQ8NGY7 276 aa9.18□□□□□ -0.94
TCOF1-211ENST00000513346 SSC4DQ8WTU2 575 aa9.18□□□□□ -0.94
TCOF1-211ENST00000513346 TMEM190Q8WZ59 177 aa9.18□□□□□ -0.94
TCOF1-211ENST00000513346 FBXL15Q9H469 300 aa9.18□□□□□ -0.94
TCOF1-211ENST00000513346 LINC00312Q9Y6C7 94 aa9.18□□□□□ -0.94
TCOF1-211ENST00000513346 PPP1R17O96001 155 aa9.17□□□□□ -0.94
TCOF1-211ENST00000513346 NPPCP23582 126 aa9.17□□□□□ -0.94
TCOF1-211ENST00000513346 LMO1P25800 156 aa9.17□□□□□ -0.94
TCOF1-211ENST00000513346 FXYD7P58549 80 aa9.17□□□□□ -0.94
TCOF1-211ENST00000513346 ATP5G2Q06055 141 aa9.17□□□□□ -0.94
TCOF1-211ENST00000513346 CT83Q5H943 113 aa9.17□□□□□ -0.94
TCOF1-211ENST00000513346 PAPPA-AS1Q5QFB9 102 aa9.17□□□□□ -0.94
TCOF1-211ENST00000513346 ZC2HC1BQ5TFG8 222 aa9.17□□□□□ -0.94
TCOF1-211ENST00000513346 ZNF48Q96MX3 618 aaPredicted RBP9.17□□□□□ -0.94
TCOF1-211ENST00000513346 ABCA2Q9BZC7 2435 aa9.17□□□□□ -0.94
TCOF1-211ENST00000513346 ZNF815PA8K554 130 aa9.17□□□□□ -0.94
TCOF1-211ENST00000513346 IFI27P40305 119 aaPredicted RBP9.17□□□□□ -0.94
TCOF1-211ENST00000513346 CCL3L1P16619 93 aa9.17□□□□□ -0.94
TCOF1-211ENST00000513346 Q6ZS92 163 aa9.17□□□□□ -0.94
TCOF1-211ENST00000513346 C7orf69Q9H7B7 122 aa9.17□□□□□ -0.94
TCOF1-211ENST00000513346 PLSCR4Q9NRQ2 329 aa9.17□□□□□ -0.94
TCOF1-211ENST00000513346 LSM4Q9Y4Z0 139 aaKnown RBP9.17□□□□□ -0.94
TCOF1-211ENST00000513346 GGTLC3B5MD39 225 aa9.17□□□□□ -0.94
TCOF1-211ENST00000513346 SCGB1A1P11684 91 aa9.17□□□□□ -0.94
TCOF1-211ENST00000513346 LYZL1Q6UWQ5 148 aa9.17□□□□□ -0.94
TCOF1-211ENST00000513346 MDS2Q8NDY4 140 aa9.16□□□□□ -0.94
TCOF1-211ENST00000513346 DOCK10Q96BY6 2186 aa9.16□□□□□ -0.94
TCOF1-211ENST00000513346 NCR2O95944 276 aa9.16□□□□□ -0.94
TCOF1-211ENST00000513346 VWC2Q2TAL6 325 aa9.16□□□□□ -0.94
TCOF1-211ENST00000513346 COLCA1Q6ZS62 124 aa9.16□□□□□ -0.94
TCOF1-211ENST00000513346 ZNF492Q9P255 531 aa9.16□□□□□ -0.94
TCOF1-211ENST00000513346 SAP30O75446 220 aa9.16□□□□□ -0.94
TCOF1-211ENST00000513346 EVI2AP22794 236 aa9.16□□□□□ -0.94
TCOF1-211ENST00000513346 KLF5Q13887 457 aaPredicted RBP9.16□□□□□ -0.94
TCOF1-211ENST00000513346 CHTOPQ9Y3Y2 248 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 297.2 ms