RNA–Protein interactions for RNA: ENST00000513205.5

PPARGC1A-211, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 1,432 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-211ENST00000513205 KRTAP19-4Q3LI73 84 aa6.72□□□□□ -1.33
PPARGC1A-211ENST00000513205 C1orf194Q5T5A4 169 aa6.72□□□□□ -1.33
PPARGC1A-211ENST00000513205 MORN5Q5VZ52 161 aa6.72□□□□□ -1.33
PPARGC1A-211ENST00000513205 RASL11AQ6T310 242 aa6.72□□□□□ -1.33
PPARGC1A-211ENST00000513205 C9orf139Q6ZV77 190 aa6.72□□□□□ -1.33
PPARGC1A-211ENST00000513205 OCC1Q8TAD7 63 aa6.72□□□□□ -1.33
PPARGC1A-211ENST00000513205 CMTM2Q8TAZ6 248 aa6.72□□□□□ -1.33
PPARGC1A-211ENST00000513205 ZNF502Q8TBZ5 544 aa6.72□□□□□ -1.33
PPARGC1A-211ENST00000513205 AAMDCQ9H7C9 122 aa6.72□□□□□ -1.33
PPARGC1A-211ENST00000513205 CLEC5AQ9NY25 188 aa6.72□□□□□ -1.33
PPARGC1A-211ENST00000513205 RABAC1Q9UI14 185 aa6.72□□□□□ -1.33
PPARGC1A-211ENST00000513205 TNCP24821 2201 aa6.72□□□□□ -1.33
PPARGC1A-211ENST00000513205 TRBV19A0A075B6N1 114 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 A0A096LNT2 108 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 TGIF2-C20orf24A0A0A6YYL0 155 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 TRAV5A0A0B4J249 113 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 TRAV41A0A0B4J266 112 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 A0A1W2PPQ1 181 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 TMEM89A2RUT3 159 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 A6NDX4 124 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 ZNF98A6NK75 572 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 OR2J3O76001 311 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 MT-ND6P03923 174 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 SLC25A5P05141 298 aaKnown RBP6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 RNASE1P07998 156 aaKnown RBP6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 CXCL1P09341 107 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 IGLC2P0DOY2 106 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 RHOGP84095 191 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 RPEL1Q2QD12 228 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 C15orf32Q32M92 178 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 C19orf54Q5BKX5 351 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 CT83Q5H943 113 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 FAM120AOSQ5T036 256 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 HSPB9Q9BQS6 159 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 KRTAP4-5Q9BYR2 181 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 Q9H3A6 140 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 DOPEY1Q5JWR5 2465 aa6.71□□□□□ -1.34
PPARGC1A-211ENST00000513205 IGHV3-21A0A0B4J1V1 117 aa6.7□□□□□ -1.34
PPARGC1A-211ENST00000513205 A0A0G2JLM5 398 aa6.7□□□□□ -1.34
PPARGC1A-211ENST00000513205 A0A0U1RQK1 487 aa6.7□□□□□ -1.34
PPARGC1A-211ENST00000513205 FAM231BA6NCW3 169 aa6.7□□□□□ -1.34
PPARGC1A-211ENST00000513205 PGPA6NDG6 321 aa6.7□□□□□ -1.34
PPARGC1A-211ENST00000513205 TCRAP04437 139 aa6.7□□□□□ -1.34
PPARGC1A-211ENST00000513205 CTSGP08311 255 aa6.7□□□□□ -1.34
PPARGC1A-211ENST00000513205 RANP62826 216 aaKnown RBP6.7□□□□□ -1.34
PPARGC1A-211ENST00000513205 SRSF1Q07955 248 aaKnown RBP eCLIP6.7□□□□□ -1.34
PPARGC1A-211ENST00000513205 ECSCRQ19T08 205 aa6.7□□□□□ -1.34
PPARGC1A-211ENST00000513205 IBA57Q5T440 356 aaKnown RBP6.7□□□□□ -1.34
PPARGC1A-211ENST00000513205 WDR73Q6P4I2 378 aa6.7□□□□□ -1.34
PPARGC1A-211ENST00000513205 C19orf35Q6ZS72 473 aa6.7□□□□□ -1.34
PPARGC1A-211ENST00000513205 BAGE2Q86Y30 109 aa6.7□□□□□ -1.34
PPARGC1A-211ENST00000513205 TMEM75Q8N9X5 138 aa6.7□□□□□ -1.34
PPARGC1A-211ENST00000513205 PIFOQ8TCI5 191 aa6.7□□□□□ -1.34
PPARGC1A-211ENST00000513205 ZFP30Q9Y2G7 519 aa6.7□□□□□ -1.34
PPARGC1A-211ENST00000513205 K7EN84 100 aa6.69□□□□□ -1.34
PPARGC1A-211ENST00000513205 LTAP01374 205 aa6.69□□□□□ -1.34
PPARGC1A-211ENST00000513205 IGHV4-38-2P0DP08 117 aa6.69□□□□□ -1.34
PPARGC1A-211ENST00000513205 CSN1S1P47710 185 aa6.69□□□□□ -1.34
PPARGC1A-211ENST00000513205 ATP5G2Q06055 141 aa6.69□□□□□ -1.34
PPARGC1A-211ENST00000513205 RUSC1-AS1Q66K80 236 aa6.69□□□□□ -1.34
PPARGC1A-211ENST00000513205 OR5T1Q8NG75 326 aa6.69□□□□□ -1.34
PPARGC1A-211ENST00000513205 OR4B1Q8NGF8 309 aa6.69□□□□□ -1.34
PPARGC1A-211ENST00000513205 BLNKQ8WV28 456 aa6.69□□□□□ -1.34
PPARGC1A-211ENST00000513205 ZNF492Q9P255 531 aa6.69□□□□□ -1.34
PPARGC1A-211ENST00000513205 SOX21Q9Y651 276 aaPredicted RBP6.69□□□□□ -1.34
PPARGC1A-211ENST00000513205 V9GYV3 84 aa6.69□□□□□ -1.34
PPARGC1A-211ENST00000513205 FLNCQ14315 2725 aa6.69□□□□□ -1.34
PPARGC1A-211ENST00000513205 A0A087X0K7 114 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 H3BUX3 64 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 MRPS12O15235 138 aaKnown RBP6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 HIST1H2BKO60814 126 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 TRGC2P03986 189 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 HIST1H2BJP06899 126 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 SMIM6P0DI80 62 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 HIST1H2BOP23527 126 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 HIST1H2BBP33778 126 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 HIST1H2BDP58876 126 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 HIST1H2BCP62807 126 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 USF2Q15853 346 aaPredicted RBP6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 HIST2H2BEQ16778 126 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 KLF17Q5JT82 389 aaPredicted RBP6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 COA6Q5JTJ3 125 aaKnown RBP6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 ACTL10Q5JWF8 245 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 BRD3OSQ6XYD6 125 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 SIGLEC15Q6ZMC9 328 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 ATP5L2Q7Z4Y8 100 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 ZFP82Q8N141 532 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 HIST1H2BHQ93079 126 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 HIST1H2BNQ99877 126 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 HIST1H2BMQ99879 126 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 SLC50A1Q9BRV3 221 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 GFRA4Q9GZZ7 299 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 ZNF586Q9NXT0 402 aa6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 UBR5O95071 2799 aaPredicted RBP6.68□□□□□ -1.34
PPARGC1A-211ENST00000513205 SMIM27A0A1W2PRY6 76 aa6.67□□□□□ -1.34
PPARGC1A-211ENST00000513205 OR2T8A6NH00 312 aa6.67□□□□□ -1.34
PPARGC1A-211ENST00000513205 FSHBP01225 129 aa6.67□□□□□ -1.34
PPARGC1A-211ENST00000513205 IGLV2-8P01709 118 aa6.67□□□□□ -1.34
PPARGC1A-211ENST00000513205 AMY1AP04745 511 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms