RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 CTSGP08311 255 aa8.03□□□□□ -1.12
PDLIM5-217ENST00000512274 SFTA3P0C7M3 94 aa8.03□□□□□ -1.12
PDLIM5-217ENST00000512274 RD3LP0DJH9 198 aa8.03□□□□□ -1.12
PDLIM5-217ENST00000512274 APELAP0DMC3 54 aa8.03□□□□□ -1.12
PDLIM5-217ENST00000512274 PSG1P11464 419 aa8.03□□□□□ -1.12
PDLIM5-217ENST00000512274 GCHFRP30047 84 aa8.03□□□□□ -1.12
PDLIM5-217ENST00000512274 RHOGP84095 191 aa8.03□□□□□ -1.12
PDLIM5-217ENST00000512274 ECSCRQ19T08 205 aa8.03□□□□□ -1.12
PDLIM5-217ENST00000512274 C15orf32Q32M92 178 aa8.03□□□□□ -1.12
PDLIM5-217ENST00000512274 C9orf152Q5JTZ5 239 aa8.03□□□□□ -1.12
PDLIM5-217ENST00000512274 C10orf113Q5VZT2 155 aa8.03□□□□□ -1.12
PDLIM5-217ENST00000512274 C18orf65Q6ZTR6 163 aa8.03□□□□□ -1.12
PDLIM5-217ENST00000512274 CCDC28AQ8IWP9 274 aa8.03□□□□□ -1.12
PDLIM5-217ENST00000512274 OR5T1Q8NG75 326 aa8.03□□□□□ -1.12
PDLIM5-217ENST00000512274 OR4X2Q8NGF9 303 aa8.03□□□□□ -1.12
PDLIM5-217ENST00000512274 MYOZ3Q8TDC0 251 aa8.03□□□□□ -1.12
PDLIM5-217ENST00000512274 EEF1AKMT3Q96AZ1 226 aa8.03□□□□□ -1.12
PDLIM5-217ENST00000512274 A0A0G2JLM5 398 aa8.02□□□□□ -1.13
PDLIM5-217ENST00000512274 G3V318 75 aa8.02□□□□□ -1.13
PDLIM5-217ENST00000512274 ARL14EPLP0DKL9 152 aa8.02□□□□□ -1.13
PDLIM5-217ENST00000512274 GATA2P23769 480 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-217ENST00000512274 RAB9AP51151 201 aa8.02□□□□□ -1.13
PDLIM5-217ENST00000512274 FAM74A3Q4VXF1 159 aa8.02□□□□□ -1.13
PDLIM5-217ENST00000512274 ZNF600Q6ZNG1 722 aa8.02□□□□□ -1.13
PDLIM5-217ENST00000512274 ZNF491Q8N8L2 437 aa8.02□□□□□ -1.13
PDLIM5-217ENST00000512274 Q8WTZ3 238 aa8.02□□□□□ -1.13
PDLIM5-217ENST00000512274 C11orf52Q96A22 123 aa8.02□□□□□ -1.13
PDLIM5-217ENST00000512274 ZNF503Q96F45 646 aa8.02□□□□□ -1.13
PDLIM5-217ENST00000512274 DUX3Q96PT4 197 aa8.02□□□□□ -1.13
PDLIM5-217ENST00000512274 ZMAT4Q9H898 229 aa8.02□□□□□ -1.13
PDLIM5-217ENST00000512274 GNG13Q9P2W3 67 aa8.02□□□□□ -1.13
PDLIM5-217ENST00000512274 LINC00527Q9UJ94 153 aa8.02□□□□□ -1.13
PDLIM5-217ENST00000512274 CSMD3Q7Z407 3707 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 F6UZH7 168 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 F8W036 122 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 H3BRN7 92 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 NUPL2O15504 423 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 SNAPINO95295 136 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 ELANEP08246 267 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 PSMB8P28062 276 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 ADMP35318 185 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 FGF8P55075 233 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 CD81P60033 236 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 ATP5G2Q06055 141 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 TIGITQ495A1 244 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 SOHLH1Q5JUK2 328 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 ZNF343Q6P1L6 599 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 MIR17HGQ75NE6 70 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 ARL6IP6Q8N6S5 226 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 RNF125Q96EQ8 232 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 NARS2Q96I59 477 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 ZNF414Q96IQ9 312 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 CCDC140Q96MF4 163 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 RARRES2Q99969 163 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 SHANK2-AS3Q9BTD1 123 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 SLC25A2Q9BXI2 301 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 ZNF355PQ9NSJ1 428 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 HIGD1AQ9Y241 93 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 LYSTQ99698 3801 aa8.01□□□□□ -1.13
PDLIM5-217ENST00000512274 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8□□□□□ -1.13
PDLIM5-217ENST00000512274 TGOLN2O43493 480 aa8□□□□□ -1.13
PDLIM5-217ENST00000512274 IGHV3-48P01763 117 aa8□□□□□ -1.13
PDLIM5-217ENST00000512274 RELQ04864 619 aaPredicted RBP8□□□□□ -1.13
PDLIM5-217ENST00000512274 PNRC1Q12796 327 aaPredicted RBP8□□□□□ -1.13
PDLIM5-217ENST00000512274 FOXE3Q13461 319 aa8□□□□□ -1.13
PDLIM5-217ENST00000512274 HAGHQ16775 308 aa8□□□□□ -1.13
PDLIM5-217ENST00000512274 Q56UQ5 140 aa8□□□□□ -1.13
PDLIM5-217ENST00000512274 SPATA31B1PQ5VZV4 182 aa8□□□□□ -1.13
PDLIM5-217ENST00000512274 FAM90A2PQ658T7 463 aa8□□□□□ -1.13
PDLIM5-217ENST00000512274 C8orf86Q6ZUL3 223 aa8□□□□□ -1.13
PDLIM5-217ENST00000512274 LINC00305Q7Z4B0 112 aa8□□□□□ -1.13
PDLIM5-217ENST00000512274 RPUSD4Q96CM3 377 aaKnown RBP8□□□□□ -1.13
PDLIM5-217ENST00000512274 SLC25A39Q9BZJ4 359 aaPredicted RBP8□□□□□ -1.13
PDLIM5-217ENST00000512274 TMPRSS5Q9H3S3 457 aa8□□□□□ -1.13
PDLIM5-217ENST00000512274 DOK5Q9P104 306 aa8□□□□□ -1.13
PDLIM5-217ENST00000512274 SMAD5-AS1Q9Y6J3 95 aa8□□□□□ -1.13
PDLIM5-217ENST00000512274 FAM74A7A6NL05 159 aa7.99□□□□□ -1.13
PDLIM5-217ENST00000512274 C11orf94C9JXX5 98 aa7.99□□□□□ -1.13
PDLIM5-217ENST00000512274 BMPR1BO00238 502 aa7.99□□□□□ -1.13
PDLIM5-217ENST00000512274 GP9P14770 177 aa7.99□□□□□ -1.13
PDLIM5-217ENST00000512274 MYCNOSP40205 109 aa7.99□□□□□ -1.13
PDLIM5-217ENST00000512274 PDE6HQ13956 83 aa7.99□□□□□ -1.13
PDLIM5-217ENST00000512274 C1orf194Q5T5A4 169 aa7.99□□□□□ -1.13
PDLIM5-217ENST00000512274 LYPD1Q8N2G4 141 aa7.99□□□□□ -1.13
PDLIM5-217ENST00000512274 CYB561D1Q8N8Q1 229 aa7.99□□□□□ -1.13
PDLIM5-217ENST00000512274 RXFP4Q8TDU9 374 aa7.99□□□□□ -1.13
PDLIM5-217ENST00000512274 FXYD5Q96DB9 178 aa7.99□□□□□ -1.13
PDLIM5-217ENST00000512274 NOL4LQ96MY1 436 aaPredicted RBP7.99□□□□□ -1.13
PDLIM5-217ENST00000512274 OR51M1Q9H341 326 aa7.99□□□□□ -1.13
PDLIM5-217ENST00000512274 TMEM231Q9H6L2 316 aa7.99□□□□□ -1.13
PDLIM5-217ENST00000512274 ZFAND3Q9H8U3 227 aa7.99□□□□□ -1.13
PDLIM5-217ENST00000512274 IGHV3-21A0A0B4J1V1 117 aa7.98□□□□□ -1.13
PDLIM5-217ENST00000512274 B4DEV8 164 aa7.98□□□□□ -1.13
PDLIM5-217ENST00000512274 PAGE4O60829 102 aa7.98□□□□□ -1.13
PDLIM5-217ENST00000512274 ZNF253O75346 499 aa7.98□□□□□ -1.13
PDLIM5-217ENST00000512274 APOC3P02656 99 aa7.98□□□□□ -1.13
PDLIM5-217ENST00000512274 TRGV3P03979 118 aa7.98□□□□□ -1.13
PDLIM5-217ENST00000512274 HIST1H1EP10412 219 aaKnown RBP7.98□□□□□ -1.13
PDLIM5-217ENST00000512274 ORM2P19652 201 aa7.98□□□□□ -1.13
PDLIM5-217ENST00000512274 SLC35B1P78383 322 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms