RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 HEATR5AQ86XA9 2040 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 UNC79Q9P2D8 2635 aa3.96□□□□□ -1.78
TRAPPC11-208ENST00000511955 KIAA1549Q9HCM3 1950 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 IGLV1-36A0A0B4J1U3 117 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 TRAV8-6A0A0B4J262 113 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 IGHV1-69-2A0A0G2JMI3 117 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 A0A0J9YW62 118 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 FAM236AA0A1B0GUQ0 79 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 FAM236BA0A1B0GV22 79 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 B4DEV8 164 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 CA2P00918 260 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 RPS4Y1P22090 263 aaKnown RBP3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 CA7P43166 264 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 HERV-K104P61576 105 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 TDRG1Q3Y452 100 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 ZNF493Q6ZR52 646 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 LCNL1Q6ZST4 164 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 TRPT1Q86TN4 253 aaKnown RBP3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 GGNQ86UU5 652 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 OR10G2Q8NGC3 310 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 OR4C16Q8NGL9 310 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 OR8S1Q8NH09 359 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 BORCS8Q96FH0 119 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 IGF2BP2-AS1Q96M15 143 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 LINC01587Q99440 93 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 SLC35B3Q9H1N7 401 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 RERGLQ9H628 205 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 MTFP1Q9UDX5 166 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 FUT9Q9Y231 359 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 ITPR2Q14571 2701 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 IGLV3-32A0A0A0MS00 114 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 IGKV1D-13A0A0B4J2D9 117 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 TMEM272A0A1B0GTI8 110 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 A0A1B0GWA3 101 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 IGKV1-13P0DP09 117 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 ZNF136P52737 540 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 TAS2R46P59540 309 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 ENDOGQ14249 297 aaKnown RBP3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 SP6Q3SY56 376 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 LCN12Q6JVE5 192 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 LCN15Q6UWW0 184 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 TMEM14EPQ6UXP3 125 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 SCGB1D4Q6XE38 83 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 TTC9CQ8N5M4 171 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 C9orf106Q8NAJ2 232 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 SRXN1Q9BYN0 137 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 SMDT1Q9H4I9 107 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 PROCRQ9UNN8 238 aa3.95□□□□□ -1.78
TRAPPC11-208ENST00000511955 TEX15Q9BXT5 2789 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 ICE1Q9Y2F5 2266 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 IGHV3-9P01782 118 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 IGLC1P0CG04 106 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 FAUP35544 74 aaKnown RBP3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 RBMXP38159 391 aaKnown RBP3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 DAD1P61803 113 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 FAM222AQ5U5X8 452 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 FOXI2Q6ZQN5 318 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 SSX8Q7RTT4 187 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 SAXO1Q8IYX7 474 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 OR5AK2Q8NH90 309 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 NMNAT3Q96T66 252 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 SLC25A21Q9BQT8 299 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 ZNF835Q9Y2P0 537 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 MRPS16Q9Y3D3 137 aaKnown RBP3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 AMMECR1Q9Y4X0 333 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 HRNRQ86YZ3 2850 aaPredicted RBP3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 TRBV24-1A0A075B6N3 115 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 M0R129 80 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 NDUFS5O43920 106 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 DEDDO75618 318 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 LYZL6O75951 148 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 CDKN2AP42771 156 aaKnown RBP3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 NDUFV3P56181 108 aaKnown RBP3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 HES1Q14469 280 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 ZNF260Q3ZCT1 412 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 SLC22A24Q8N4F4 322 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 C15orf40Q8WUR7 153 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 CCL17Q92583 94 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 IMMP2LQ96T52 175 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 CYTL1Q9NRR1 136 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 ABRACLQ9P1F3 81 aa3.94□□□□□ -1.78
TRAPPC11-208ENST00000511955 ANKHD1Q8IWZ3 2542 aaKnown RBP3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 WI2-2373I1.2A0A1W2PRP0 233 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 A6NIN4 97 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 ZNF727A8MUV8 499 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 SRSF10O75494 262 aaKnown RBP3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 PMS2P2O95744 297 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 CD55P08174 381 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 HIST1H1DP16402 221 aaKnown RBP3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 LORP23490 312 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 COL10A1Q03692 680 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 LOXL1Q08397 574 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 KIAA1644Q3SXP7 199 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 C1orf140Q5VVS0 124 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 AMMECR1LQ6DCA0 310 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 CLEC19AQ6UXS0 136 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 PFN4Q8NHR9 129 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 GEMIN6Q8WXD5 167 aaKnown RBP3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 PRSS27Q9BQR3 290 aa3.93□□□□□ -1.78
TRAPPC11-208ENST00000511955 PAXXQ9BUH6 204 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms