RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 VPS13AQ96RL7 3174 aa7.3□□□□□ -1.24
PDGFRA-208ENST00000509490 TRAV30A0A087WSZ9 112 aa7.3□□□□□ -1.24
PDGFRA-208ENST00000509490 LINC01546A6NGU7 62 aa7.3□□□□□ -1.24
PDGFRA-208ENST00000509490 PLAUP00749 431 aa7.3□□□□□ -1.24
PDGFRA-208ENST00000509490 PSG3Q16557 428 aa7.3□□□□□ -1.24
PDGFRA-208ENST00000509490 BPIFA4PQ86YQ2 179 aa7.3□□□□□ -1.24
PDGFRA-208ENST00000509490 CCL17Q92583 94 aa7.3□□□□□ -1.24
PDGFRA-208ENST00000509490 INSIG2Q9Y5U4 225 aa7.3□□□□□ -1.24
PDGFRA-208ENST00000509490 CCL25O15444 150 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 COL8A1P27658 744 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 BATFQ16520 125 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 CIARTQ8N365 385 aaPredicted RBP7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 OR11H6Q8NGC7 330 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 MAP1LC3CQ9BXW4 147 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 CUL9Q8IWT3 2517 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 K7EQM0 130 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 CHEK1O14757 476 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 FCGR2BP31994 310 aaPredicted RBP7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 FBXL19-AS1Q494R0 122 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 C12orf54Q6X4T0 127 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 DEFB125Q8N687 156 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 PSMG3-AS1Q96PY0 264 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 RASL11BQ9BPW5 248 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 CLEC5AQ9NY25 188 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 CADP27708 2225 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 NPIPB5A8MRT5 1133 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 IGHV3-48P01763 117 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 CNTFRP26992 372 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 SLC25A34Q6PIV7 304 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 ZNF491Q8N8L2 437 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 ZC2HC1AQ96GY0 325 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 ZNF414Q96IQ9 312 aa7.29□□□□□ -1.24
PDGFRA-208ENST00000509490 PAX8Q06710 450 aa7.28□□□□□ -1.24
PDGFRA-208ENST00000509490 PSMG4Q5JS54 123 aa7.28□□□□□ -1.24
PDGFRA-208ENST00000509490 ASPHD1Q5U4P2 390 aa7.28□□□□□ -1.24
PDGFRA-208ENST00000509490 LEMD1Q68G75 181 aa7.28□□□□□ -1.24
PDGFRA-208ENST00000509490 Q8NA96 180 aa7.28□□□□□ -1.24
PDGFRA-208ENST00000509490 CFHR4Q92496 578 aa7.28□□□□□ -1.24
PDGFRA-208ENST00000509490 ZNF747Q9BV97 191 aa7.28□□□□□ -1.24
PDGFRA-208ENST00000509490 PSG8Q9UQ74 426 aa7.28□□□□□ -1.24
PDGFRA-208ENST00000509490 ENSAO43768 121 aaKnown RBP7.28□□□□□ -1.24
PDGFRA-208ENST00000509490 HIST1H1AQ02539 215 aaPredicted RBP7.28□□□□□ -1.24
PDGFRA-208ENST00000509490 BVES-AS1Q5T3Y7 98 aa7.28□□□□□ -1.24
PDGFRA-208ENST00000509490 ATOH7Q8N100 152 aa7.28□□□□□ -1.24
PDGFRA-208ENST00000509490 PIFOQ8TCI5 191 aa7.28□□□□□ -1.24
PDGFRA-208ENST00000509490 ODF3BA8MYP8 253 aa7.27□□□□□ -1.25
PDGFRA-208ENST00000509490 HINT1P49773 126 aaPredicted RBP7.27□□□□□ -1.25
PDGFRA-208ENST00000509490 CRIP1P50238 77 aa7.27□□□□□ -1.25
PDGFRA-208ENST00000509490 LYZP61626 148 aa7.27□□□□□ -1.25
PDGFRA-208ENST00000509490 GOLT1AQ6ZVE7 132 aa7.27□□□□□ -1.25
PDGFRA-208ENST00000509490 OR1N2Q8NGR9 330 aa7.27□□□□□ -1.25
PDGFRA-208ENST00000509490 DYNLRB1Q9NP97 96 aa7.27□□□□□ -1.25
PDGFRA-208ENST00000509490 NAV3Q8IVL0 2385 aa7.27□□□□□ -1.25
PDGFRA-208ENST00000509490 CD5LO43866 347 aa7.27□□□□□ -1.25
PDGFRA-208ENST00000509490 COX8AP10176 69 aa7.27□□□□□ -1.25
PDGFRA-208ENST00000509490 PCP4P48539 62 aa7.27□□□□□ -1.25
PDGFRA-208ENST00000509490 PLCE1Q9P212 2302 aa7.27□□□□□ -1.25
PDGFRA-208ENST00000509490 IGLV11-55A0A075B6I3 123 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 LOC105371242A0A075B767 164 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 M0R1W7 72 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 TAX1BP3O14907 124 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 TCF21O43680 179 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 UNQ5815/PRO19632Q6UWF5 114 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 LINC00173Q6ZV60 143 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 RNF125Q96EQ8 232 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 CNFNQ9BYD5 112 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 OOSP1A8MZH6 123 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 HSBP1L1C9JCN9 74 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 CSN1S1P47710 185 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 PTTG1IPP53801 180 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 PSG9Q00887 426 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 EBI3Q14213 229 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 LGALS9BQ3B8N2 356 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 FBLN7Q53RD9 439 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 LGALS9CQ6DKI2 356 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 PRNTQ86SH4 94 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 EXOC3-AS1Q8N2X6 119 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 TTC9CQ8N5M4 171 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 OR10AG1Q8NH19 301 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 RPEQ96AT9 228 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 FBXL15Q9H469 300 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 GSX1Q9H4S2 264 aaPredicted RBP7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 AP5S1Q9NUS5 200 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 FRYQ5TBA9 3013 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 NBR2O15453 112 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 ARMS2P0C7Q2 107 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 RBX1P62877 108 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 VKORC1Q9BQB6 163 aa7.26□□□□□ -1.25
PDGFRA-208ENST00000509490 A0A096LNJ9 63 aa7.25□□□□□ -1.25
PDGFRA-208ENST00000509490 TRAV8-1A0A0A6YYK1 113 aa7.25□□□□□ -1.25
PDGFRA-208ENST00000509490 IGHV3-72A0A0B4J1Y9 119 aa7.25□□□□□ -1.25
PDGFRA-208ENST00000509490 PPIAL4CA0A0B4J2A2 164 aa7.25□□□□□ -1.25
PDGFRA-208ENST00000509490 SIVA1O15304 175 aa7.25□□□□□ -1.25
PDGFRA-208ENST00000509490 PPIAL4GP0DN37 164 aa7.25□□□□□ -1.25
PDGFRA-208ENST00000509490 HTR1DP28221 377 aa7.25□□□□□ -1.25
PDGFRA-208ENST00000509490 CDKN1BP46527 198 aa7.25□□□□□ -1.25
PDGFRA-208ENST00000509490 LINC01559Q495D7 138 aa7.25□□□□□ -1.25
PDGFRA-208ENST00000509490 Q8N6K4 173 aa7.25□□□□□ -1.25
PDGFRA-208ENST00000509490 F8W735 103 aaPredicted RBP7.25□□□□□ -1.25
PDGFRA-208ENST00000509490 SEC11AP67812 179 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms