RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 SPAG8Q99932 426 aaPredicted RBP11.18□□□□□ -0.62
RNF4-213ENST00000509388 SLC25A32Q9H2D1 315 aa11.18□□□□□ -0.62
RNF4-213ENST00000509388 VWFP04275 2813 aa11.18□□□□□ -0.62
RNF4-213ENST00000509388 A0A1W2PPV4 95 aa11.17□□□□□ -0.62
RNF4-213ENST00000509388 OR4C46A6NHA9 309 aa11.17□□□□□ -0.62
RNF4-213ENST00000509388 ZNF785A8K8V0 405 aa11.17□□□□□ -0.62
RNF4-213ENST00000509388 TPT1P13693 172 aaKnown RBP11.17□□□□□ -0.62
RNF4-213ENST00000509388 M6PRP20645 277 aa11.17□□□□□ -0.62
RNF4-213ENST00000509388 FAM90A2PQ658T7 463 aa11.17□□□□□ -0.62
RNF4-213ENST00000509388 C9orf62Q8N4C0 152 aa11.17□□□□□ -0.62
RNF4-213ENST00000509388 NOTCH3Q9UM47 2321 aa11.17□□□□□ -0.62
RNF4-213ENST00000509388 ATF4P18848 351 aaPredicted RBP11.16□□□□□ -0.62
RNF4-213ENST00000509388 NKX2-5P52952 324 aaPredicted RBP11.16□□□□□ -0.62
RNF4-213ENST00000509388 KRTAP10-11P60412 298 aa11.16□□□□□ -0.62
RNF4-213ENST00000509388 RHOBP62745 196 aa11.16□□□□□ -0.62
RNF4-213ENST00000509388 BEAN1Q3B7T3 259 aa11.16□□□□□ -0.62
RNF4-213ENST00000509388 AKR1C8PQ5T2L2 129 aa11.16□□□□□ -0.62
RNF4-213ENST00000509388 GTSCR1Q86UQ5 136 aa11.16□□□□□ -0.62
RNF4-213ENST00000509388 BPIFA4PQ86YQ2 179 aa11.16□□□□□ -0.62
RNF4-213ENST00000509388 BAP18Q8IXM2 172 aa11.16□□□□□ -0.62
RNF4-213ENST00000509388 OR10G4Q8NGN3 311 aa11.16□□□□□ -0.62
RNF4-213ENST00000509388 OR10G9Q8NGN4 311 aa11.16□□□□□ -0.62
RNF4-213ENST00000509388 OR10G7Q8NGN6 311 aa11.16□□□□□ -0.62
RNF4-213ENST00000509388 MRPL32Q9BYC8 188 aaKnown RBP11.16□□□□□ -0.62
RNF4-213ENST00000509388 SH3BGRL3Q9H299 93 aa11.16□□□□□ -0.62
RNF4-213ENST00000509388 MS4A6AQ9H2W1 248 aa11.16□□□□□ -0.62
RNF4-213ENST00000509388 RFNGQ9Y644 331 aa11.16□□□□□ -0.62
RNF4-213ENST00000509388 TRAV5A0A0B4J249 113 aa11.15□□□□□ -0.62
RNF4-213ENST00000509388 EIF5AL1Q6IS14 154 aaKnown RBP11.15□□□□□ -0.62
RNF4-213ENST00000509388 SLC51BQ86UW2 128 aa11.15□□□□□ -0.62
RNF4-213ENST00000509388 SEPSECSQ9HD40 501 aaKnown RBP11.15□□□□□ -0.62
RNF4-213ENST00000509388 NRN1Q9NPD7 142 aa11.15□□□□□ -0.62
RNF4-213ENST00000509388 FUT9Q9Y231 359 aa11.15□□□□□ -0.62
RNF4-213ENST00000509388 SPP1P10451 314 aa11.14□□□□□ -0.63
RNF4-213ENST00000509388 CMC4P56277 68 aaPredicted RBP11.14□□□□□ -0.63
RNF4-213ENST00000509388 TAS2R45P59539 299 aa11.14□□□□□ -0.63
RNF4-213ENST00000509388 RAB2AP61019 212 aa11.14□□□□□ -0.63
RNF4-213ENST00000509388 TMEM41BQ5BJD5 291 aa11.14□□□□□ -0.63
RNF4-213ENST00000509388 KPRPQ5T749 579 aaPredicted RBP11.14□□□□□ -0.63
RNF4-213ENST00000509388 SAMD13Q5VXD3 122 aa11.14□□□□□ -0.63
RNF4-213ENST00000509388 FAM122CQ6P4D5 195 aa11.14□□□□□ -0.63
RNF4-213ENST00000509388 MIR17HGQ75NE6 70 aa11.14□□□□□ -0.63
RNF4-213ENST00000509388 LRRC20Q8TCA0 184 aa11.14□□□□□ -0.63
RNF4-213ENST00000509388 PRR25Q96S07 402 aa11.14□□□□□ -0.63
RNF4-213ENST00000509388 TRAV2A0A0B4J234 112 aa11.13□□□□□ -0.63
RNF4-213ENST00000509388 SEC11BP0C7V7 166 aa11.13□□□□□ -0.63
RNF4-213ENST00000509388 MEOX2P50222 304 aa11.13□□□□□ -0.63
RNF4-213ENST00000509388 CD81P60033 236 aa11.13□□□□□ -0.63
RNF4-213ENST00000509388 MORN5Q5VZ52 161 aa11.13□□□□□ -0.63
RNF4-213ENST00000509388 STOML3Q8TAV4 291 aa11.13□□□□□ -0.63
RNF4-213ENST00000509388 ACTR3CQ9C0K3 210 aaPredicted RBP11.13□□□□□ -0.63
RNF4-213ENST00000509388 MGAM2Q2M2H8 2515 aa11.13□□□□□ -0.63
RNF4-213ENST00000509388 ID1P41134 155 aa11.12□□□□□ -0.63
RNF4-213ENST00000509388 CDC34P49427 236 aaPredicted RBP11.12□□□□□ -0.63
RNF4-213ENST00000509388 SPATA31B1PQ5VZV4 182 aa11.12□□□□□ -0.63
RNF4-213ENST00000509388 C16orf92Q96LL3 132 aa11.12□□□□□ -0.63
RNF4-213ENST00000509388 OR7C2O60412 319 aa11.11□□□□□ -0.63
RNF4-213ENST00000509388 PRB2P02812 416 aaPredicted RBP11.11□□□□□ -0.63
RNF4-213ENST00000509388 SNRPD3P62318 126 aaKnown RBP11.11□□□□□ -0.63
RNF4-213ENST00000509388 KHDC3LQ587J8 217 aa11.11□□□□□ -0.63
RNF4-213ENST00000509388 TMED6Q8WW62 240 aa11.11□□□□□ -0.63
RNF4-213ENST00000509388 PAXXQ9BUH6 204 aa11.11□□□□□ -0.63
RNF4-213ENST00000509388 OR51M1Q9H341 326 aa11.11□□□□□ -0.63
RNF4-213ENST00000509388 RPRMQ9NS64 109 aa11.11□□□□□ -0.63
RNF4-213ENST00000509388 TMEM14CQ9P0S9 112 aa11.11□□□□□ -0.63
RNF4-213ENST00000509388 SMAD5-AS1Q9Y6J3 95 aa11.11□□□□□ -0.63
RNF4-213ENST00000509388 PKD1L1Q8TDX9 2849 aa11.1□□□□□ -0.63
RNF4-213ENST00000509388 CMYA5Q8N3K9 4069 aa11.1□□□□□ -0.63
RNF4-213ENST00000509388 OR11H12B2RN74 326 aa11.1□□□□□ -0.63
RNF4-213ENST00000509388 UMAD1C9J7I0 102 aa11.1□□□□□ -0.63
RNF4-213ENST00000509388 K7EQG2 157 aa11.1□□□□□ -0.63
RNF4-213ENST00000509388 SNRPCP09234 159 aaKnown RBP11.1□□□□□ -0.63
RNF4-213ENST00000509388 CD7P09564 240 aa11.1□□□□□ -0.63
RNF4-213ENST00000509388 GUK1Q16774 197 aa11.1□□□□□ -0.63
RNF4-213ENST00000509388 RPP25LQ8N5L8 163 aaKnown RBP11.1□□□□□ -0.63
RNF4-213ENST00000509388 DCANP1Q8TF63 244 aa11.1□□□□□ -0.63
RNF4-213ENST00000509388 LINC00052Q96N35 136 aa11.1□□□□□ -0.63
RNF4-213ENST00000509388 SLC25A2Q9BXI2 301 aa11.1□□□□□ -0.63
RNF4-213ENST00000509388 AURKAIP1Q9NWT8 199 aaPredicted RBP11.1□□□□□ -0.63
RNF4-213ENST00000509388 UBQLN2Q9UHD9 624 aa11.1□□□□□ -0.63
RNF4-213ENST00000509388 A0A087X0K7 114 aa11.09□□□□□ -0.63
RNF4-213ENST00000509388 BOLA2-SMG1P6H3BVE0 249 aa11.09□□□□□ -0.63
RNF4-213ENST00000509388 HMGB3O15347 200 aaKnown RBP11.09□□□□□ -0.63
RNF4-213ENST00000509388 ZNF688P0C7X2 276 aa11.09□□□□□ -0.63
RNF4-213ENST00000509388 PYYP10082 97 aa11.09□□□□□ -0.63
RNF4-213ENST00000509388 HIST1H1EP10412 219 aaKnown RBP11.09□□□□□ -0.63
RNF4-213ENST00000509388 LCN15Q6UWW0 184 aa11.09□□□□□ -0.63
RNF4-213ENST00000509388 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.09□□□□□ -0.63
RNF4-213ENST00000509388 RNF141Q8WVD5 230 aa11.09□□□□□ -0.63
RNF4-213ENST00000509388 RAB24Q969Q5 203 aa11.09□□□□□ -0.63
RNF4-213ENST00000509388 HRH4Q9H3N8 390 aa11.09□□□□□ -0.63
RNF4-213ENST00000509388 BOLA1Q9Y3E2 137 aa11.09□□□□□ -0.63
RNF4-213ENST00000509388 CTXND1A0A1B0GTU2 59 aa11.08□□□□□ -0.64
RNF4-213ENST00000509388 ISLRO14498 428 aa11.08□□□□□ -0.64
RNF4-213ENST00000509388 MRPS12O15235 138 aaKnown RBP11.08□□□□□ -0.64
RNF4-213ENST00000509388 EIF3GO75821 320 aaKnown RBP eCLIP11.08□□□□□ -0.64
RNF4-213ENST00000509388 PSMB3P49720 205 aa11.08□□□□□ -0.64
RNF4-213ENST00000509388 DEFB131AP59861 70 aa11.08□□□□□ -0.64
RNF4-213ENST00000509388 UBE2L3P68036 154 aaKnown RBP11.08□□□□□ -0.64
RNF4-213ENST00000509388 DEFB121Q5J5C9 76 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 353.8 ms