RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 NAA38Q9BRA0 125 aaKnown RBP3.09□□□□□ -1.91
NEDD4-209ENST00000508871 HTTP42858 3142 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 IGHV3OR15-7A0A075B7D8 119 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 K7ERJ3 54 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 PAX4O43316 350 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 RBM3P98179 157 aaKnown RBP3.09□□□□□ -1.91
NEDD4-209ENST00000508871 PRR31Q5SQ13 230 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 Q6ZSR3 168 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 RNF126Q9BV68 326 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 OCR1Q9BZK8 76 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 AMMECR1Q9Y4X0 333 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-209ENST00000508871 LY96Q9Y6Y9 160 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF670-ZNF695F2Z2N8 137 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 LINC01619G3V211 115 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 IGHV3-48P01763 117 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 PFN1P07737 140 aaKnown RBP3.09□□□□□ -1.91
NEDD4-209ENST00000508871 NHLRC4P0CG21 123 aaPredicted RBP3.09□□□□□ -1.91
NEDD4-209ENST00000508871 HIST1H4AP62805 103 aaKnown RBP3.09□□□□□ -1.91
NEDD4-209ENST00000508871 ZNF117Q03924 483 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 GLYATL3Q5SZD4 288 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 LINC01551Q86U37 167 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 TMEM183AQ8IXX5 376 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 TMEM158Q8WZ71 300 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 CHCHD1Q96BP2 118 aaKnown RBP3.09□□□□□ -1.91
NEDD4-209ENST00000508871 OR4C12Q96R67 309 aa3.09□□□□□ -1.91
NEDD4-209ENST00000508871 EML6Q6ZMW3 1958 aa3.09□□□□□ -1.92
NEDD4-209ENST00000508871 TRAV27A0A087WT01 109 aa3.09□□□□□ -1.92
NEDD4-209ENST00000508871 A8MWL6 223 aa3.09□□□□□ -1.92
NEDD4-209ENST00000508871 OVOL1O14753 267 aa3.09□□□□□ -1.92
NEDD4-209ENST00000508871 TOMM40O96008 361 aa3.09□□□□□ -1.92
NEDD4-209ENST00000508871 COX6A1P12074 109 aa3.09□□□□□ -1.92
NEDD4-209ENST00000508871 NMUP48645 174 aa3.09□□□□□ -1.92
NEDD4-209ENST00000508871 KLRD1Q13241 179 aa3.09□□□□□ -1.92
NEDD4-209ENST00000508871 ZNF146Q15072 292 aa3.09□□□□□ -1.92
NEDD4-209ENST00000508871 MSMPQ1L6U9 139 aa3.09□□□□□ -1.92
NEDD4-209ENST00000508871 RPL36ALQ969Q0 106 aaKnown RBP3.09□□□□□ -1.92
NEDD4-209ENST00000508871 S100A16Q96FQ6 103 aaKnown RBP3.09□□□□□ -1.92
NEDD4-209ENST00000508871 WFDC6Q9BQY6 131 aa3.09□□□□□ -1.92
NEDD4-209ENST00000508871 MANBALQ9NQG1 85 aa3.09□□□□□ -1.92
NEDD4-209ENST00000508871 IGKV1D-42A0A075B6H8 117 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 IGHV3OR16-12A0A075B7B8 117 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 TRAV1-2A0A0B4J238 106 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 C15orf61A6NNL5 157 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 C11orf94C9JXX5 98 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 TMEM256-PLSCR3K7ERE1 68 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 Q6YL49 198 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 TSLPQ969D9 159 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 ZNF222Q9UK12 451 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 ZNF318Q5VUA4 2279 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 SLC25A20O43772 301 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 HPNP05981 417 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 ZNF791Q3KP31 576 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-209ENST00000508871 ZNF322Q6U7Q0 402 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-209ENST00000508871 APCDD1LQ8NCL9 501 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 FRZBQ92765 325 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 SPRY4Q9C004 299 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 TMEM14AQ9Y6G1 99 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 TRBV19A0A075B6N1 114 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 LINC01548A6NM66 108 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 TMEM212A6NML5 194 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 IFITM5A6NNB3 132 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 IGLL5B9A064 214 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 SYNGR2O43760 224 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 PRM2P04554 102 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 PIP4P1Q86T03 277 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 OR4X2Q8NGF9 303 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 ZNF563Q8TA94 476 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 MRPS24Q96EL2 167 aaKnown RBP3.08□□□□□ -1.92
NEDD4-209ENST00000508871 C19orf73Q9NVV2 129 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 IL36BQ9NZH7 164 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 SPAG17Q6Q759 2223 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 A0A1W2PPE3 182 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 A8MWP6 167 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 K7EQD1 137 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 BMPR1BO00238 502 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 DSCR4P56555 118 aaPredicted RBP3.08□□□□□ -1.92
NEDD4-209ENST00000508871 RUNX1Q01196 453 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 FAAP20Q6NZ36 180 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 SPSB3Q6PJ21 355 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 CBLN2Q8IUK8 224 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 ZCCHC24Q8N2G6 241 aaKnown RBP3.08□□□□□ -1.92
NEDD4-209ENST00000508871 PP6455Q8WZ26 134 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 NABP1Q96AH0 204 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 IMMP1LQ96LU5 166 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 SCRT2Q9NQ03 307 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 A0A1B0GX51 115 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 WI2-2373I1.2A0A1W2PRP0 233 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 WISP2O76076 250 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 FXYD6P3P58550 94 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 CD177Q8N6Q3 437 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 RPS10P5Q9NQ39 176 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 PROCRQ9UNN8 238 aa3.08□□□□□ -1.92
NEDD4-209ENST00000508871 PPP1R3DO95685 299 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 IGHV1-2P23083 117 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 DYNLT3P51808 116 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 TDGF1P3P51864 188 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 MRPS36P82909 103 aaKnown RBP3.07□□□□□ -1.92
NEDD4-209ENST00000508871 AQP10Q96PS8 301 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 IMMP2LQ96T52 175 aa3.07□□□□□ -1.92
NEDD4-209ENST00000508871 CCL13Q99616 98 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms