RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 CHTF8P0CG12 524 aa5.57□□□□□ -1.52
PDGFRA-206ENST00000508170 HOXB6P17509 224 aaKnown RBP5.57□□□□□ -1.52
PDGFRA-206ENST00000508170 HBBP68871 147 aa5.57□□□□□ -1.52
PDGFRA-206ENST00000508170 Q56UQ5 140 aa5.57□□□□□ -1.52
PDGFRA-206ENST00000508170 OR1J4Q8NGS1 313 aa5.57□□□□□ -1.52
PDGFRA-206ENST00000508170 PLXNA3P51805 1871 aa5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 TRAV12-2A0A075B6T6 113 aa5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 IGHV4OR15-8A0A075B7B6 117 aa5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 TRAV19A0A0A6YYK7 116 aa5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 IGKV1-5P01602 117 aa5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 HLA-DRB4P13762 266 aa5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 CD52P31358 61 aa5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 ZNF136P52737 540 aa5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 ZNF431Q8TF32 576 aaPredicted RBP5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 POP5Q969H6 163 aaKnown RBP5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 HLA-DRB4X5D2U9 266 aa5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 GNB2P62879 340 aa5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 RPL38P63173 70 aaKnown RBP5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 ADAMTSL4-AS1Q5T5F5 129 aa5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 PHF5AQ7RTV0 110 aaKnown RBP5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 TEN1Q86WV5 123 aa5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 C2orf15Q8WU43 125 aaKnown RBP5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 RBMXL1Q96E39 390 aaKnown RBP5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 SND1-IT1Q9HBX3 110 aa5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 KLK13Q9UKR3 277 aa5.56□□□□□ -1.52
PDGFRA-206ENST00000508170 IGHV4-4A0A075B6R2 117 aa5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 ANKRD36A6QL64 1941 aa5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 CRYGAP11844 174 aa5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 LY6G5CQ5SRR4 150 aa5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 TMEM91Q6ZNR0 172 aa5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 CSNK1G2-AS1Q8NCQ2 148 aa5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 GBF1Q92538 1859 aa5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 POLR2J2Q9GZM3 115 aaKnown RBP5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 PLEKHF2Q9H8W4 249 aa5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 MOB4Q9Y3A3 225 aa5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 RPL37AP8A6NKH3 93 aa5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 RFXAPO00287 272 aa5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 NDUFB3O43676 98 aa5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 DUSP14O95147 198 aaKnown RBP5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 SRP19P09132 144 aaKnown RBP5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 SPINK2P20155 84 aa5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 MPGP29372 298 aa5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 LINC00205P59089 165 aa5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 SLC25A42Q86VD7 318 aa5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 RNASE6Q93091 150 aaKnown RBP5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 PYGO2Q9BRQ0 406 aa5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 OCR1Q9BZK8 76 aa5.55□□□□□ -1.52
PDGFRA-206ENST00000508170 TRBV27A0A0K0K1C4 114 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 PITX3O75364 302 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 ZNF883P0CG24 379 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 HIST1H2BOP23527 126 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 HIST1H2BBP33778 126 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 CXCL5P42830 114 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 HIST1H2BDP58876 126 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 HIST1H2BCP62807 126 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 ICAM4Q14773 271 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 HIST2H2BEQ16778 126 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 COA6Q5JTJ3 125 aaKnown RBP5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 C10orf25Q5T742 122 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 AADACL3Q5VUY0 350 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 C10orf111Q8N326 155 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 OR10P1Q8NGE3 313 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 OR8A1Q8NGG7 326 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 OR5D16Q8NGK9 328 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 HIST1H2BHQ93079 126 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 HIST1H2BNQ99877 126 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 HIST1H2BMQ99879 126 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 UQCR10Q9UDW1 63 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 ZNF222Q9UK12 451 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 GREB1Q4ZG55 1949 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 IGLV5-39A0A0G2JS06 123 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 BUB1B-PAK6H3BSN5 160 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 K7EP34 96 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 M0R2P5 195 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 LYRM1O43325 122 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 SYNGR2O43760 224 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 SEC11BP0C7V7 166 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 ATP5G2Q06055 141 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 EGFEM1PQ0D2K5 195 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 Q0VG73 95 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 FOXF1Q12946 379 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 DAZAP2Q15038 168 aaPredicted RBP5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 LGALS9BQ3B8N2 356 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 LGALS9CQ6DKI2 356 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 OR5H2Q8NGV7 314 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 FAM57AQ8TBR7 257 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 SLC25A22Q9H936 323 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 FAM60AQ9NP50 221 aa5.54□□□□□ -1.52
PDGFRA-206ENST00000508170 IGHV1-45A0A0A0MS14 117 aa5.53□□□□□ -1.52
PDGFRA-206ENST00000508170 C3orf85A0A1B0GTC6 90 aa5.53□□□□□ -1.52
PDGFRA-206ENST00000508170 A0A1W2PS18 150 aa5.53□□□□□ -1.52
PDGFRA-206ENST00000508170 OR1I1O60431 355 aa5.53□□□□□ -1.52
PDGFRA-206ENST00000508170 PIRTP0C851 137 aa5.53□□□□□ -1.52
PDGFRA-206ENST00000508170 SNRPD3P62318 126 aaKnown RBP5.53□□□□□ -1.52
PDGFRA-206ENST00000508170 ORMDL2Q53FV1 153 aa5.53□□□□□ -1.52
PDGFRA-206ENST00000508170 C19orf48Q6RUI8 117 aa5.53□□□□□ -1.52
PDGFRA-206ENST00000508170 NFE4Q86UQ8 179 aa5.53□□□□□ -1.52
PDGFRA-206ENST00000508170 PARLQ9H300 379 aa5.53□□□□□ -1.52
PDGFRA-206ENST00000508170 IGLC7A0M8Q6 106 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms