RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 SNRPCP09234 159 aaKnown RBP13.32□□□□□ -0.28
RNF4-209ENST00000507784 OR10J4P0C629 311 aa13.32□□□□□ -0.28
RNF4-209ENST00000507784 EDN2P20800 178 aa13.32□□□□□ -0.28
RNF4-209ENST00000507784 PQLC2Q6ZP29 291 aa13.32□□□□□ -0.28
RNF4-209ENST00000507784 BPIFA4PQ86YQ2 179 aa13.32□□□□□ -0.28
RNF4-209ENST00000507784 C3orf56Q8N813 242 aa13.32□□□□□ -0.28
RNF4-209ENST00000507784 STXBP6Q8NFX7 210 aa13.32□□□□□ -0.28
RNF4-209ENST00000507784 GRAMD2BQ96HH9 432 aa13.32□□□□□ -0.28
RNF4-209ENST00000507784 PEMTQ9UBM1 199 aa13.32□□□□□ -0.28
RNF4-209ENST00000507784 SMPXQ9UHP9 88 aa13.32□□□□□ -0.28
RNF4-209ENST00000507784 U3KQE9 123 aa13.32□□□□□ -0.28
RNF4-209ENST00000507784 JMJD1CQ15652 2540 aa13.31□□□□□ -0.28
RNF4-209ENST00000507784 BUB3O43684 328 aa13.31□□□□□ -0.28
RNF4-209ENST00000507784 PF4P02776 101 aa13.31□□□□□ -0.28
RNF4-209ENST00000507784 UBE2L3P68036 154 aaKnown RBP13.31□□□□□ -0.28
RNF4-209ENST00000507784 LYPD6BQ8NI32 183 aa13.31□□□□□ -0.28
RNF4-209ENST00000507784 ZNF503Q96F45 646 aa13.31□□□□□ -0.28
RNF4-209ENST00000507784 RHPN1-AS1Q9BWJ2 59 aa13.31□□□□□ -0.28
RNF4-209ENST00000507784 GNG13Q9P2W3 67 aa13.31□□□□□ -0.28
RNF4-209ENST00000507784 SELENOKQ9Y6D0 94 aa13.31□□□□□ -0.28
RNF4-209ENST00000507784 ZNF785A8K8V0 405 aa13.3□□□□□ -0.28
RNF4-209ENST00000507784 M0QZ24 198 aa13.3□□□□□ -0.28
RNF4-209ENST00000507784 OVOL1O14753 267 aa13.3□□□□□ -0.28
RNF4-209ENST00000507784 BMI1P35226 326 aa13.3□□□□□ -0.28
RNF4-209ENST00000507784 FHL3Q13643 280 aa13.3□□□□□ -0.28
RNF4-209ENST00000507784 C16orf54Q6UWD8 224 aa13.3□□□□□ -0.28
RNF4-209ENST00000507784 LURAP1LQ8IV03 231 aa13.3□□□□□ -0.28
RNF4-209ENST00000507784 OR4F17Q8NGA8 305 aa13.3□□□□□ -0.28
RNF4-209ENST00000507784 BLNKQ8WV28 456 aa13.3□□□□□ -0.28
RNF4-209ENST00000507784 OR4F4Q96R69 305 aa13.3□□□□□ -0.28
RNF4-209ENST00000507784 ZNF747Q9BV97 191 aa13.3□□□□□ -0.28
RNF4-209ENST00000507784 TMEM231Q9H6L2 316 aa13.3□□□□□ -0.28
RNF4-209ENST00000507784 TMEM167BQ9NRX6 74 aa13.3□□□□□ -0.28
RNF4-209ENST00000507784 TMEM213A2RRL7 107 aa13.29□□□□□ -0.28
RNF4-209ENST00000507784 C2orf70A6NJV1 201 aa13.29□□□□□ -0.28
RNF4-209ENST00000507784 A8MWP6 167 aa13.29□□□□□ -0.28
RNF4-209ENST00000507784 H3BTX0 84 aa13.29□□□□□ -0.28
RNF4-209ENST00000507784 CHEK1O14757 476 aa13.29□□□□□ -0.28
RNF4-209ENST00000507784 IFNA1P01562 189 aa13.29□□□□□ -0.28
RNF4-209ENST00000507784 RPL7P18124 248 aaKnown RBP13.29□□□□□ -0.28
RNF4-209ENST00000507784 ATF4P18848 351 aaPredicted RBP13.29□□□□□ -0.28
RNF4-209ENST00000507784 PSMB3P49720 205 aa13.29□□□□□ -0.28
RNF4-209ENST00000507784 UBE2G2P60604 165 aa13.29□□□□□ -0.28
RNF4-209ENST00000507784 HAGHQ16775 308 aa13.29□□□□□ -0.28
RNF4-209ENST00000507784 C1orf194Q5T5A4 169 aa13.29□□□□□ -0.28
RNF4-209ENST00000507784 OR9G4Q8NGQ1 327 aa13.29□□□□□ -0.28
RNF4-209ENST00000507784 MARC2Q969Z3 335 aa13.29□□□□□ -0.28
RNF4-209ENST00000507784 ELOVL1Q9BW60 279 aa13.29□□□□□ -0.28
RNF4-209ENST00000507784 TMEM14CQ9P0S9 112 aa13.29□□□□□ -0.28
RNF4-209ENST00000507784 LINC00862A6NCI5 91 aa13.28□□□□□ -0.28
RNF4-209ENST00000507784 HIST1H1EP10412 219 aaKnown RBP13.28□□□□□ -0.28
RNF4-209ENST00000507784 FOLR2P14207 255 aa13.28□□□□□ -0.28
RNF4-209ENST00000507784 GP9P14770 177 aa13.28□□□□□ -0.28
RNF4-209ENST00000507784 CBLN1P23435 193 aa13.28□□□□□ -0.28
RNF4-209ENST00000507784 GALR1P47211 349 aa13.28□□□□□ -0.28
RNF4-209ENST00000507784 PPT1P50897 306 aa13.28□□□□□ -0.28
RNF4-209ENST00000507784 RPL11P62913 178 aaKnown RBP13.28□□□□□ -0.28
RNF4-209ENST00000507784 COMMD7Q86VX2 200 aa13.28□□□□□ -0.28
RNF4-209ENST00000507784 FXYD5Q96DB9 178 aa13.28□□□□□ -0.28
RNF4-209ENST00000507784 GPR82Q96P67 336 aa13.28□□□□□ -0.28
RNF4-209ENST00000507784 PAGE4O60829 102 aa13.27□□□□□ -0.29
RNF4-209ENST00000507784 NBEAP1P0C6P0 100 aa13.27□□□□□ -0.29
RNF4-209ENST00000507784 SIGLEC15Q6ZMC9 328 aa13.27□□□□□ -0.29
RNF4-209ENST00000507784 EIF5A2Q9GZV4 153 aaKnown RBP13.27□□□□□ -0.29
RNF4-209ENST00000507784 RBFOX3A6NFN3 312 aa13.26□□□□□ -0.29
RNF4-209ENST00000507784 MRPS12O15235 138 aaKnown RBP13.26□□□□□ -0.29
RNF4-209ENST00000507784 GUK1Q16774 197 aa13.26□□□□□ -0.29
RNF4-209ENST00000507784 TOR2AQ5JU69 321 aa13.26□□□□□ -0.29
RNF4-209ENST00000507784 CST9LP1Q5W188 147 aa13.26□□□□□ -0.29
RNF4-209ENST00000507784 DYNLRB2Q8TF09 96 aa13.26□□□□□ -0.29
RNF4-209ENST00000507784 GLMPQ8WWB7 406 aa13.26□□□□□ -0.29
RNF4-209ENST00000507784 MANBALQ9NQG1 85 aa13.26□□□□□ -0.29
RNF4-209ENST00000507784 ZNF586Q9NXT0 402 aa13.26□□□□□ -0.29
RNF4-209ENST00000507784 SMAD5-AS1Q9Y6J3 95 aa13.26□□□□□ -0.29
RNF4-209ENST00000507784 SETD2Q9BYW2 2564 aaPredicted RBP13.26□□□□□ -0.29
RNF4-209ENST00000507784 IGKV3-7A0A075B6H7 116 aa13.25□□□□□ -0.29
RNF4-209ENST00000507784 H3BQ15 152 aa13.25□□□□□ -0.29
RNF4-209ENST00000507784 CSN3P07498 182 aa13.25□□□□□ -0.29
RNF4-209ENST00000507784 TCF24Q7RTU0 167 aa13.25□□□□□ -0.29
RNF4-209ENST00000507784 SLC7A5P1Q8MH63 180 aa13.25□□□□□ -0.29
RNF4-209ENST00000507784 C17orf77Q96MU5 243 aa13.25□□□□□ -0.29
RNF4-209ENST00000507784 FAM210AQ96ND0 272 aa13.25□□□□□ -0.29
RNF4-209ENST00000507784 RARRES2Q99969 163 aa13.25□□□□□ -0.29
RNF4-209ENST00000507784 LOC102723971A0A1B0GUV8 181 aa13.24□□□□□ -0.29
RNF4-209ENST00000507784 HELTA6NFD8 242 aa13.24□□□□□ -0.29
RNF4-209ENST00000507784 IGLC2P0DOY2 106 aa13.24□□□□□ -0.29
RNF4-209ENST00000507784 RANP62826 216 aaKnown RBP13.24□□□□□ -0.29
RNF4-209ENST00000507784 NDUFA5Q16718 116 aa13.24□□□□□ -0.29
RNF4-209ENST00000507784 SHISA2Q6UWI4 295 aa13.24□□□□□ -0.29
RNF4-209ENST00000507784 RXFP4Q8TDU9 374 aa13.24□□□□□ -0.29
RNF4-209ENST00000507784 TREM1Q9NP99 234 aa13.24□□□□□ -0.29
RNF4-209ENST00000507784 MED9Q9NWA0 146 aa13.24□□□□□ -0.29
RNF4-209ENST00000507784 BCL2P10415 239 aa13.23□□□□□ -0.29
RNF4-209ENST00000507784 PEA15Q15121 130 aa13.23□□□□□ -0.29
RNF4-209ENST00000507784 ADAMTSL5Q6ZMM2 481 aa13.23□□□□□ -0.29
RNF4-209ENST00000507784 SUN5Q8TC36 379 aa13.23□□□□□ -0.29
RNF4-209ENST00000507784 MLXQ9UH92 298 aa13.23□□□□□ -0.29
RNF4-209ENST00000507784 VAX2Q9UIW0 290 aa13.23□□□□□ -0.29
RNF4-209ENST00000507784 YTHDF2Q9Y5A9 579 aaKnown RBP13.23□□□□□ -0.29
RNF4-209ENST00000507784 TRBV19A0A075B6N1 114 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms