RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 INSL3P51460 131 aa0.92□□□□□ -2.26
HMGB1P28-201ENST00000507778 CDK6Q00534 326 aa0.92□□□□□ -2.26
HMGB1P28-201ENST00000507778 PSG9Q00887 426 aa0.92□□□□□ -2.26
HMGB1P28-201ENST00000507778 POU6F1Q14863 301 aa0.92□□□□□ -2.26
HMGB1P28-201ENST00000507778 PATE2Q6UY27 113 aa0.92□□□□□ -2.26
HMGB1P28-201ENST00000507778 OR5D16Q8NGK9 328 aa0.92□□□□□ -2.26
HMGB1P28-201ENST00000507778 AP3S1Q92572 193 aa0.92□□□□□ -2.26
HMGB1P28-201ENST00000507778 MUCL1Q96DR8 90 aa0.92□□□□□ -2.26
HMGB1P28-201ENST00000507778 ZHX1-C8orf76Q96EF9 292 aa0.92□□□□□ -2.26
HMGB1P28-201ENST00000507778 ZNF714Q96N38 554 aa0.92□□□□□ -2.26
HMGB1P28-201ENST00000507778 LYSMD1Q96S90 227 aa0.92□□□□□ -2.26
HMGB1P28-201ENST00000507778 TMEM70Q9BUB7 260 aa0.92□□□□□ -2.26
HMGB1P28-201ENST00000507778 PBOV1Q9GZY1 135 aa0.92□□□□□ -2.26
HMGB1P28-201ENST00000507778 SS18L2Q9UHA2 77 aa0.92□□□□□ -2.26
HMGB1P28-201ENST00000507778 EIF3AQ14152 1382 aaKnown RBP0.92□□□□□ -2.26
HMGB1P28-201ENST00000507778 KIF1BO60333 1816 aa0.92□□□□□ -2.26
HMGB1P28-201ENST00000507778 NCR3O14931 201 aa0.91□□□□□ -2.26
HMGB1P28-201ENST00000507778 TRGC2P03986 189 aa0.91□□□□□ -2.26
HMGB1P28-201ENST00000507778 SNCBQ16143 134 aa0.91□□□□□ -2.26
HMGB1P28-201ENST00000507778 OR4K15Q8NH41 348 aa0.91□□□□□ -2.26
HMGB1P28-201ENST00000507778 PPTC7Q8NI37 304 aa0.91□□□□□ -2.26
HMGB1P28-201ENST00000507778 ZNF431Q8TF32 576 aaPredicted RBP0.91□□□□□ -2.26
HMGB1P28-201ENST00000507778 POP5Q969H6 163 aaKnown RBP0.91□□□□□ -2.26
HMGB1P28-201ENST00000507778 RAB37Q96AX2 223 aa0.91□□□□□ -2.26
HMGB1P28-201ENST00000507778 CEP164Q9UPV0 1460 aa0.91□□□□□ -2.26
HMGB1P28-201ENST00000507778 EML6Q6ZMW3 1958 aa0.9□□□□□ -2.26
HMGB1P28-201ENST00000507778 NCOA6Q14686 2063 aaPredicted RBP0.9□□□□□ -2.26
HMGB1P28-201ENST00000507778 F8W1H4 67 aa0.9□□□□□ -2.27
HMGB1P28-201ENST00000507778 CXCL1P09341 107 aa0.9□□□□□ -2.27
HMGB1P28-201ENST00000507778 CXCL8P10145 99 aa0.9□□□□□ -2.27
HMGB1P28-201ENST00000507778 OGNP20774 298 aaKnown RBP0.9□□□□□ -2.27
HMGB1P28-201ENST00000507778 RAB5CP51148 216 aa0.9□□□□□ -2.27
HMGB1P28-201ENST00000507778 ARPP19P56211 112 aa0.9□□□□□ -2.27
HMGB1P28-201ENST00000507778 GNG3P63215 75 aa0.9□□□□□ -2.27
HMGB1P28-201ENST00000507778 C1orf134Q5TEV5 83 aa0.9□□□□□ -2.27
HMGB1P28-201ENST00000507778 TEN1Q86WV5 123 aa0.9□□□□□ -2.27
HMGB1P28-201ENST00000507778 GKN2Q86XP6 184 aa0.9□□□□□ -2.27
HMGB1P28-201ENST00000507778 PLPP5Q8NEB5 264 aa0.9□□□□□ -2.27
HMGB1P28-201ENST00000507778 Q8TAT8 98 aa0.9□□□□□ -2.27
HMGB1P28-201ENST00000507778 CHCHD1Q96BP2 118 aaKnown RBP0.9□□□□□ -2.27
HMGB1P28-201ENST00000507778 MALSU1Q96EH3 234 aa0.9□□□□□ -2.27
HMGB1P28-201ENST00000507778 GGACTQ9BVM4 153 aa0.9□□□□□ -2.27
HMGB1P28-201ENST00000507778 OR52A1Q9UKL2 312 aa0.9□□□□□ -2.27
HMGB1P28-201ENST00000507778 SCN10AQ9Y5Y9 1956 aa0.89□□□□□ -2.27
HMGB1P28-201ENST00000507778 NCAPD3P42695 1498 aa0.89□□□□□ -2.27
HMGB1P28-201ENST00000507778 A0A087WSZ3 146 aa0.89□□□□□ -2.27
HMGB1P28-201ENST00000507778 H3BRM9 83 aa0.89□□□□□ -2.27
HMGB1P28-201ENST00000507778 KLF7O75840 302 aaPredicted RBP0.89□□□□□ -2.27
HMGB1P28-201ENST00000507778 IGLV1-51P01701 117 aa0.89□□□□□ -2.27
HMGB1P28-201ENST00000507778 IFNA4P05014 189 aa0.89□□□□□ -2.27
HMGB1P28-201ENST00000507778 TMBIM6P55061 237 aa0.89□□□□□ -2.27
HMGB1P28-201ENST00000507778 KLRD1Q13241 179 aa0.89□□□□□ -2.27
HMGB1P28-201ENST00000507778 KRTAP26-1Q6PEX3 210 aa0.89□□□□□ -2.27
HMGB1P28-201ENST00000507778 HAGHLQ6PII5 290 aaPredicted RBP0.89□□□□□ -2.27
HMGB1P28-201ENST00000507778 LYG2Q86SG7 212 aa0.89□□□□□ -2.27
HMGB1P28-201ENST00000507778 GPX7Q96SL4 187 aaPredicted RBP0.89□□□□□ -2.27
HMGB1P28-201ENST00000507778 MAP1LC3BQ9GZQ8 125 aa0.89□□□□□ -2.27
HMGB1P28-201ENST00000507778 TNFSF18Q9UNG2 199 aa0.89□□□□□ -2.27
HMGB1P28-201ENST00000507778 IGLV3-32A0A0A0MS00 114 aa0.88□□□□□ -2.27
HMGB1P28-201ENST00000507778 TRAV5A0A0B4J249 113 aa0.88□□□□□ -2.27
HMGB1P28-201ENST00000507778 OR2T8A6NH00 312 aa0.88□□□□□ -2.27
HMGB1P28-201ENST00000507778 MFSD11O43934 449 aa0.88□□□□□ -2.27
HMGB1P28-201ENST00000507778 COX7CP15954 63 aa0.88□□□□□ -2.27
HMGB1P28-201ENST00000507778 PPP1R2P41236 205 aa0.88□□□□□ -2.27
HMGB1P28-201ENST00000507778 GRINAQ7Z429 371 aa0.88□□□□□ -2.27
HMGB1P28-201ENST00000507778 OR5AS1Q8N127 324 aa0.88□□□□□ -2.27
HMGB1P28-201ENST00000507778 SMIM20Q8N5G0 67 aa0.88□□□□□ -2.27
HMGB1P28-201ENST00000507778 HYLS1Q96M11 299 aa0.88□□□□□ -2.27
HMGB1P28-201ENST00000507778 CCDC94Q9BW85 323 aaPredicted RBP0.88□□□□□ -2.27
HMGB1P28-201ENST00000507778 CACYBPQ9HB71 228 aaKnown RBP0.88□□□□□ -2.27
HMGB1P28-201ENST00000507778 CEP192Q8TEP8 1941 aa0.87□□□□□ -2.27
HMGB1P28-201ENST00000507778 COL1A1P02452 1464 aaPredicted RBP0.87□□□□□ -2.27
HMGB1P28-201ENST00000507778 TRAV27A0A087WT01 109 aa0.87□□□□□ -2.27
HMGB1P28-201ENST00000507778 ODAMA1E959 279 aa0.87□□□□□ -2.27
HMGB1P28-201ENST00000507778 K7ERJ3 54 aa0.87□□□□□ -2.27
HMGB1P28-201ENST00000507778 HIST1H2BKO60814 126 aa0.87□□□□□ -2.27
HMGB1P28-201ENST00000507778 HIST1H2BJP06899 126 aa0.87□□□□□ -2.27
HMGB1P28-201ENST00000507778 TAS2R41P59536 307 aa0.87□□□□□ -2.27
HMGB1P28-201ENST00000507778 ARPINQ7Z6K5 226 aa0.87□□□□□ -2.27
HMGB1P28-201ENST00000507778 LRRC18Q8N456 261 aa0.87□□□□□ -2.27
HMGB1P28-201ENST00000507778 Q8N6K4 173 aa0.87□□□□□ -2.27
HMGB1P28-201ENST00000507778 NUP35Q8NFH5 326 aa0.87□□□□□ -2.27
HMGB1P28-201ENST00000507778 TMEM138Q9NPI0 162 aa0.87□□□□□ -2.27
HMGB1P28-201ENST00000507778 DOCK3Q8IZD9 2030 aa0.87□□□□□ -2.27
HMGB1P28-201ENST00000507778 DENND4CQ5VZ89 1909 aa0.87□□□□□ -2.27
HMGB1P28-201ENST00000507778 CAMSAP2Q08AD1 1489 aa0.86□□□□□ -2.27
HMGB1P28-201ENST00000507778 CECR2Q9BXF3 1484 aa0.86□□□□□ -2.27
HMGB1P28-201ENST00000507778 LAMB4A4D0S4 1761 aa0.86□□□□□ -2.27
HMGB1P28-201ENST00000507778 RER1O15258 196 aa0.86□□□□□ -2.27
HMGB1P28-201ENST00000507778 CSN2P05814 226 aa0.86□□□□□ -2.27
HMGB1P28-201ENST00000507778 EFNA4P52798 201 aa0.86□□□□□ -2.27
HMGB1P28-201ENST00000507778 TCTAP57738 103 aa0.86□□□□□ -2.27
HMGB1P28-201ENST00000507778 MSMO1Q15800 293 aa0.86□□□□□ -2.27
HMGB1P28-201ENST00000507778 C1orf140Q5VVS0 124 aa0.86□□□□□ -2.27
HMGB1P28-201ENST00000507778 RTL8AQ9BWD3 113 aa0.86□□□□□ -2.27
HMGB1P28-201ENST00000507778 UFC1Q9Y3C8 167 aa0.86□□□□□ -2.27
HMGB1P28-201ENST00000507778 CD109Q6YHK3 1445 aa0.86□□□□□ -2.27
HMGB1P28-201ENST00000507778 RFX7Q2KHR2 1363 aa0.85□□□□□ -2.27
HMGB1P28-201ENST00000507778 TNRC6AQ8NDV7 1962 aaKnown RBP0.85□□□□□ -2.27
HMGB1P28-201ENST00000507778 hDV103S1A0JD37 113 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms