RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 IGHV3-35A0A0C4DH35 117 aa6.35□□□□□ -1.39
PDGFC-205ENST00000506880 RNF222A6NCQ9 220 aa6.35□□□□□ -1.39
PDGFC-205ENST00000506880 UMAD1C9J7I0 102 aa6.35□□□□□ -1.39
PDGFC-205ENST00000506880 G3V3Q6 166 aa6.35□□□□□ -1.39
PDGFC-205ENST00000506880 K7EQG2 157 aa6.35□□□□□ -1.39
PDGFC-205ENST00000506880 ORM2P19652 201 aa6.35□□□□□ -1.39
PDGFC-205ENST00000506880 M6PRP20645 277 aa6.35□□□□□ -1.39
PDGFC-205ENST00000506880 RHOBP62745 196 aa6.35□□□□□ -1.39
PDGFC-205ENST00000506880 CLINT1Q14677 625 aa6.35□□□□□ -1.39
PDGFC-205ENST00000506880 DPPA3Q6W0C5 159 aa6.35□□□□□ -1.39
PDGFC-205ENST00000506880 PQLC2Q6ZP29 291 aa6.35□□□□□ -1.39
PDGFC-205ENST00000506880 LYPD1Q8N2G4 141 aa6.35□□□□□ -1.39
PDGFC-205ENST00000506880 MRPL53Q96EL3 112 aaKnown RBP6.35□□□□□ -1.39
PDGFC-205ENST00000506880 ST6GAL2Q96JF0 529 aa6.35□□□□□ -1.39
PDGFC-205ENST00000506880 ARPC5LQ9BPX5 153 aa6.35□□□□□ -1.39
PDGFC-205ENST00000506880 PBDC1Q9BVG4 233 aa6.35□□□□□ -1.39
PDGFC-205ENST00000506880 ARL6Q9H0F7 186 aa6.35□□□□□ -1.39
PDGFC-205ENST00000506880 HRH4Q9H3N8 390 aa6.35□□□□□ -1.39
PDGFC-205ENST00000506880 AURKAIP1Q9NWT8 199 aaPredicted RBP6.35□□□□□ -1.39
PDGFC-205ENST00000506880 PRELID1Q9Y255 219 aa6.35□□□□□ -1.39
PDGFC-205ENST00000506880 KANTRA0A1W2PQU2 76 aa6.34□□□□□ -1.39
PDGFC-205ENST00000506880 OR11H12B2RN74 326 aa6.34□□□□□ -1.39
PDGFC-205ENST00000506880 RAB5CP51148 216 aa6.34□□□□□ -1.39
PDGFC-205ENST00000506880 KRTAP10-11P60412 298 aa6.34□□□□□ -1.39
PDGFC-205ENST00000506880 LGALSLQ3ZCW2 172 aaPredicted RBP6.34□□□□□ -1.39
PDGFC-205ENST00000506880 KHDC3LQ587J8 217 aa6.34□□□□□ -1.39
PDGFC-205ENST00000506880 LINC00305Q7Z4B0 112 aa6.34□□□□□ -1.39
PDGFC-205ENST00000506880 STOML3Q8TAV4 291 aa6.34□□□□□ -1.39
PDGFC-205ENST00000506880 DCANP1Q8TF63 244 aa6.34□□□□□ -1.39
PDGFC-205ENST00000506880 B9D2Q9BPU9 175 aa6.34□□□□□ -1.39
PDGFC-205ENST00000506880 MS4A6AQ9H2W1 248 aa6.34□□□□□ -1.39
PDGFC-205ENST00000506880 MEGF8Q7Z7M0 2845 aa6.34□□□□□ -1.4
PDGFC-205ENST00000506880 ARPC5O15511 151 aa6.33□□□□□ -1.4
PDGFC-205ENST00000506880 SEC11BP0C7V7 166 aa6.33□□□□□ -1.4
PDGFC-205ENST00000506880 HIST1H1EP10412 219 aaKnown RBP6.33□□□□□ -1.4
PDGFC-205ENST00000506880 ATF4P18848 351 aaPredicted RBP6.33□□□□□ -1.4
PDGFC-205ENST00000506880 APOC4P55056 127 aa6.33□□□□□ -1.4
PDGFC-205ENST00000506880 CD81P60033 236 aa6.33□□□□□ -1.4
PDGFC-205ENST00000506880 NUTF2P61970 127 aaKnown RBP6.33□□□□□ -1.4
PDGFC-205ENST00000506880 PSG9Q00887 426 aa6.33□□□□□ -1.4
PDGFC-205ENST00000506880 GUCA2BQ16661 112 aa6.33□□□□□ -1.4
PDGFC-205ENST00000506880 HIST2H2BDQ6DRA6 164 aa6.33□□□□□ -1.4
PDGFC-205ENST00000506880 MORN3Q6PF18 240 aaPredicted RBP6.33□□□□□ -1.4
PDGFC-205ENST00000506880 Q8N1Y9 231 aa6.33□□□□□ -1.4
PDGFC-205ENST00000506880 TMEM37Q8WXS4 190 aa6.33□□□□□ -1.4
PDGFC-205ENST00000506880 NKX6-2Q9C056 277 aaPredicted RBP6.33□□□□□ -1.4
PDGFC-205ENST00000506880 C19orf73Q9NVV2 129 aa6.33□□□□□ -1.4
PDGFC-205ENST00000506880 FUT9Q9Y231 359 aa6.33□□□□□ -1.4
PDGFC-205ENST00000506880 TP53TG1Q9Y2A0 90 aa6.33□□□□□ -1.4
PDGFC-205ENST00000506880 ARL2-SNX15V9GYD0 113 aa6.33□□□□□ -1.4
PDGFC-205ENST00000506880 A0A1W2PPV4 95 aa6.32□□□□□ -1.4
PDGFC-205ENST00000506880 BCL2L11O43521 198 aa6.32□□□□□ -1.4
PDGFC-205ENST00000506880 AMBPP02760 352 aa6.32□□□□□ -1.4
PDGFC-205ENST00000506880 SPP1P10451 314 aa6.32□□□□□ -1.4
PDGFC-205ENST00000506880 TPT1P13693 172 aaKnown RBP6.32□□□□□ -1.4
PDGFC-205ENST00000506880 RPL11P62913 178 aaKnown RBP6.32□□□□□ -1.4
PDGFC-205ENST00000506880 DEFA6Q01524 100 aa6.32□□□□□ -1.4
PDGFC-205ENST00000506880 MIC13Q5XKP0 118 aa6.32□□□□□ -1.4
PDGFC-205ENST00000506880 PATE2Q6UY27 113 aa6.32□□□□□ -1.4
PDGFC-205ENST00000506880 SLC51BQ86UW2 128 aa6.32□□□□□ -1.4
PDGFC-205ENST00000506880 MRAPQ8TCY5 172 aa6.32□□□□□ -1.4
PDGFC-205ENST00000506880 PHYHIPLQ96FC7 376 aa6.32□□□□□ -1.4
PDGFC-205ENST00000506880 TCEAL7Q9BRU2 100 aa6.32□□□□□ -1.4
PDGFC-205ENST00000506880 C1QTNF4Q9BXJ3 329 aa6.32□□□□□ -1.4
PDGFC-205ENST00000506880 TUBA4BQ9H853 241 aa6.32□□□□□ -1.4
PDGFC-205ENST00000506880 RPRMQ9NS64 109 aa6.32□□□□□ -1.4
PDGFC-205ENST00000506880 TRBV7-9A0A0J9YWB2 115 aa6.31□□□□□ -1.4
PDGFC-205ENST00000506880 SERTM2A0A1B0GWG4 89 aa6.31□□□□□ -1.4
PDGFC-205ENST00000506880 FBLL1A6NHQ2 334 aaKnown RBP6.31□□□□□ -1.4
PDGFC-205ENST00000506880 A8MTW9 85 aa6.31□□□□□ -1.4
PDGFC-205ENST00000506880 K7EIL1 84 aa6.31□□□□□ -1.4
PDGFC-205ENST00000506880 SOCS3O14543 225 aa6.31□□□□□ -1.4
PDGFC-205ENST00000506880 MRPS12O15235 138 aaKnown RBP6.31□□□□□ -1.4
PDGFC-205ENST00000506880 ZNF207O43670 478 aaKnown RBP6.31□□□□□ -1.4
PDGFC-205ENST00000506880 DUSP14O95147 198 aaKnown RBP6.31□□□□□ -1.4
PDGFC-205ENST00000506880 APOHP02749 345 aaPredicted RBP6.31□□□□□ -1.4
PDGFC-205ENST00000506880 IGLC2P0DOY2 106 aa6.31□□□□□ -1.4
PDGFC-205ENST00000506880 ATP6V0CP27449 155 aa6.31□□□□□ -1.4
PDGFC-205ENST00000506880 ZFP69Q49AA0 526 aa6.31□□□□□ -1.4
PDGFC-205ENST00000506880 Q5BKY6 102 aa6.31□□□□□ -1.4
PDGFC-205ENST00000506880 FFAR4Q5NUL3 377 aa6.31□□□□□ -1.4
PDGFC-205ENST00000506880 FAM74A1Q5RGS3 127 aa6.31□□□□□ -1.4
PDGFC-205ENST00000506880 FAM78BQ5VT40 261 aa6.31□□□□□ -1.4
PDGFC-205ENST00000506880 LINC00322Q6ZN03 302 aaPredicted RBP6.31□□□□□ -1.4
PDGFC-205ENST00000506880 TMEM182Q6ZP80 229 aaPredicted RBP6.31□□□□□ -1.4
PDGFC-205ENST00000506880 FOXI2Q6ZQN5 318 aa6.31□□□□□ -1.4
PDGFC-205ENST00000506880 Q6ZWC4 215 aa6.31□□□□□ -1.4
PDGFC-205ENST00000506880 SLC25A32Q9H2D1 315 aa6.31□□□□□ -1.4
PDGFC-205ENST00000506880 LOC102724200A0A096LPH7 203 aaPredicted RBP6.3□□□□□ -1.4
PDGFC-205ENST00000506880 IZUMO1RA6ND01 250 aa6.3□□□□□ -1.4
PDGFC-205ENST00000506880 TEX46H3BTG2 121 aa6.3□□□□□ -1.4
PDGFC-205ENST00000506880 PFDN1O60925 122 aa6.3□□□□□ -1.4
PDGFC-205ENST00000506880 IGHV4-30-4P0DP06 118 aa6.3□□□□□ -1.4
PDGFC-205ENST00000506880 GATA2P23769 480 aaPredicted RBP6.3□□□□□ -1.4
PDGFC-205ENST00000506880 PPT1P50897 306 aa6.3□□□□□ -1.4
PDGFC-205ENST00000506880 ODF3L2Q3SX64 289 aa6.3□□□□□ -1.4
PDGFC-205ENST00000506880 AKR1C8PQ5T2L2 129 aa6.3□□□□□ -1.4
PDGFC-205ENST00000506880 LCE2AQ5TA79 106 aaPredicted RBP6.3□□□□□ -1.4
PDGFC-205ENST00000506880 BAP18Q8IXM2 172 aa6.3□□□□□ -1.4
PDGFC-205ENST00000506880 SUN5Q8TC36 379 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms