RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 C16orf54Q6UWD8 224 aa6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 Q6ZRG5 221 aa6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 MIR17HGQ75NE6 70 aa6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 LINC00305Q7Z4B0 112 aa6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 FAM24BQ8N5W8 94 aa6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 GLMPQ8WWB7 406 aa6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 MARC2Q969Z3 335 aa6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 HYLS1Q96M11 299 aa6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 SSBP4Q9BWG4 385 aaPredicted RBP6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 ZNF471Q9BX82 626 aaPredicted RBP6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 KRTAP4-9Q9BYQ8 210 aa6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 WFDC10AQ9H1F0 79 aa6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 SLC25A32Q9H2D1 315 aa6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 DNAJC4Q9NNZ3 241 aa6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 SMAD5-AS1Q9Y6J3 95 aa6.63□□□□□ -1.35
SCAMP1-202ENST00000506858 NBEAL2Q6ZNJ1 2754 aa6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 A0A0D9SG52 128 aa6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 KANTRA0A1W2PQU2 76 aa6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 H3BRN7 92 aa6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 BCL2L11O43521 198 aa6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 MPDU1O75352 247 aa6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 CD7P09564 240 aa6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 PLP1P60201 277 aa6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 ZNF266Q14584 549 aa6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 C10orf113Q5VZT2 155 aa6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 RBPMS2Q6ZRY4 209 aaKnown RBP6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 OR8I2Q8N0Y5 310 aa6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 STXBP6Q8NFX7 210 aa6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 C17orf77Q96MU5 243 aa6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 SHANK2-AS3Q9BTD1 123 aa6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 SEPSECSQ9HD40 501 aaKnown RBP6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 SIGLEC8Q9NYZ4 499 aa6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 FBN3Q75N90 2809 aa6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 PRKDCP78527 4128 aaKnown RBP6.62□□□□□ -1.35
SCAMP1-202ENST00000506858 BORCS7-ASMTA0A0B4J1R7 106 aa6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 GP9P14770 177 aa6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 DEFB1P60022 68 aa6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 ZNF345Q14585 488 aa6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 ZNF124Q15973 351 aa6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 FAM78BQ5VT40 261 aa6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 FAM122CQ6P4D5 195 aa6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 OR2G3Q8NGZ4 309 aa6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 TECRQ9NZ01 308 aaKnown RBP6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 UBQLN2Q9UHD9 624 aa6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 A0A1W2PS18 150 aa6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 C17orf112F2Z3M2 114 aa6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 TAAR5O14804 337 aa6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 CFDP00746 253 aaPredicted RBP6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 PYYP10082 97 aa6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 INSL3P51460 131 aa6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 EGFEM1PQ0D2K5 195 aa6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 SSX7Q7RTT5 188 aa6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 NARS2Q96I59 477 aaKnown RBP6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 PARD6GQ9BYG4 376 aaPredicted RBP6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 MS4A6AQ9H2W1 248 aa6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 RPRMQ9NS64 109 aa6.61□□□□□ -1.35
SCAMP1-202ENST00000506858 H3BQ15 152 aa6.6□□□□□ -1.35
SCAMP1-202ENST00000506858 DNASE2O00115 360 aaPredicted RBP6.6□□□□□ -1.35
SCAMP1-202ENST00000506858 TSPAN4O14817 238 aa6.6□□□□□ -1.35
SCAMP1-202ENST00000506858 JTBO76095 146 aa6.6□□□□□ -1.35
SCAMP1-202ENST00000506858 HLA-DMBP28068 263 aa6.6□□□□□ -1.35
SCAMP1-202ENST00000506858 FHITP49789 147 aa6.6□□□□□ -1.35
SCAMP1-202ENST00000506858 SIGLEC15Q6ZMC9 328 aa6.6□□□□□ -1.35
SCAMP1-202ENST00000506858 RPP25LQ8N5L8 163 aaKnown RBP6.6□□□□□ -1.35
SCAMP1-202ENST00000506858 OR1L4Q8NGR5 311 aa6.6□□□□□ -1.35
SCAMP1-202ENST00000506858 TMED6Q8WW62 240 aa6.6□□□□□ -1.35
SCAMP1-202ENST00000506858 GRAMD2BQ96HH9 432 aa6.6□□□□□ -1.35
SCAMP1-202ENST00000506858 FAM167A-AS1Q96KT0 104 aa6.6□□□□□ -1.35
SCAMP1-202ENST00000506858 AURKAIP1Q9NWT8 199 aaPredicted RBP6.6□□□□□ -1.35
SCAMP1-202ENST00000506858 ZNF256Q9Y2P7 627 aaPredicted RBP6.6□□□□□ -1.35
SCAMP1-202ENST00000506858 MRPS12O15235 138 aaKnown RBP6.59□□□□□ -1.35
SCAMP1-202ENST00000506858 ZNF688P0C7X2 276 aa6.59□□□□□ -1.35
SCAMP1-202ENST00000506858 DEFA6Q01524 100 aa6.59□□□□□ -1.35
SCAMP1-202ENST00000506858 ZNF726P1Q15940 193 aa6.59□□□□□ -1.35
SCAMP1-202ENST00000506858 LCN12Q6JVE5 192 aa6.59□□□□□ -1.35
SCAMP1-202ENST00000506858 APRG1Q8IVJ8 170 aa6.59□□□□□ -1.35
SCAMP1-202ENST00000506858 Q8N1Y9 231 aa6.59□□□□□ -1.35
SCAMP1-202ENST00000506858 DEFB125Q8N687 156 aa6.59□□□□□ -1.35
SCAMP1-202ENST00000506858 OR10G4Q8NGN3 311 aa6.59□□□□□ -1.35
SCAMP1-202ENST00000506858 OR10G9Q8NGN4 311 aa6.59□□□□□ -1.35
SCAMP1-202ENST00000506858 OR10G7Q8NGN6 311 aa6.59□□□□□ -1.35
SCAMP1-202ENST00000506858 GATAD1Q8WUU5 269 aa6.59□□□□□ -1.35
SCAMP1-202ENST00000506858 ZNF503Q96F45 646 aa6.59□□□□□ -1.35
SCAMP1-202ENST00000506858 SLC25A2Q9BXI2 301 aa6.59□□□□□ -1.35
SCAMP1-202ENST00000506858 TMEM231Q9H6L2 316 aa6.59□□□□□ -1.35
SCAMP1-202ENST00000506858 TIMM9Q9Y5J7 89 aa6.59□□□□□ -1.35
SCAMP1-202ENST00000506858 AGRNO00468 2067 aa6.59□□□□□ -1.35
SCAMP1-202ENST00000506858 DNAH9Q9NYC9 4486 aa6.59□□□□□ -1.35
SCAMP1-202ENST00000506858 A0A1B0GV50 99 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 K7EIL1 84 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 SLC17A3O00476 420 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 OR10J4P0C629 311 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 SPP1P10451 314 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 M6PRP20645 277 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 CD81P60033 236 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 ACOT6Q3I5F7 207 aaPredicted RBP6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 FAM74A1Q5RGS3 127 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 KPRPQ5T749 579 aaPredicted RBP6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 PXDC1Q5TGL8 231 aa6.58□□□□□ -1.36
SCAMP1-202ENST00000506858 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms