RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 IFT20Q8IY31 132 aa0.62□□□□□ -2.31
GYPB-207ENST00000506679 Q8N814 137 aa0.62□□□□□ -2.31
GYPB-207ENST00000506679 OR2T35Q8NGX2 323 aa0.62□□□□□ -2.31
GYPB-207ENST00000506679 OR10K1Q8NGX5 313 aa0.62□□□□□ -2.31
GYPB-207ENST00000506679 ZHX1-C8orf76Q96EF9 292 aa0.62□□□□□ -2.31
GYPB-207ENST00000506679 TP53RKQ96S44 253 aa0.62□□□□□ -2.31
GYPB-207ENST00000506679 RTL8AQ9BWD3 113 aa0.62□□□□□ -2.31
GYPB-207ENST00000506679 NPCDR1Q9BY65 106 aa0.62□□□□□ -2.31
GYPB-207ENST00000506679 BIN3Q9NQY0 253 aa0.62□□□□□ -2.31
GYPB-207ENST00000506679 TNRC6AQ8NDV7 1962 aaKnown RBP0.62□□□□□ -2.31
GYPB-207ENST00000506679 ROS1P08922 2347 aa0.62□□□□□ -2.31
GYPB-207ENST00000506679 ADGBQ8N7X0 1667 aa0.62□□□□□ -2.31
GYPB-207ENST00000506679 CAMSAP2Q08AD1 1489 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 KIAA1549Q9HCM3 1950 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 ZCCHC11Q5TAX3 1644 aaKnown RBP0.61□□□□□ -2.31
GYPB-207ENST00000506679 PLXNA4Q9HCM2 1894 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 TRBV6-7A0A0A0MS04 114 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 TCRBV4S1A1TA0A5B7 111 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 TLCD2A6NGC4 264 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 ZNF736B4DX44 427 aaPredicted RBP0.61□□□□□ -2.31
GYPB-207ENST00000506679 PPP5D1E7EU14 171 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 TMEM256-PLSCR3K7ERE1 68 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 IFNA4P05014 189 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 ZNF93P35789 620 aaPredicted RBP0.61□□□□□ -2.31
GYPB-207ENST00000506679 PPP1R2P41236 205 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 DSCR4P56555 118 aaPredicted RBP0.61□□□□□ -2.31
GYPB-207ENST00000506679 CNBPP62633 177 aaKnown RBP0.61□□□□□ -2.31
GYPB-207ENST00000506679 MPV17LQ2QL34 196 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 DEFB115Q30KQ5 88 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 DEFB113Q30KQ7 82 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 FAM74A1Q5RGS3 127 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 TRIQKQ629K1 86 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 TEX261Q6UWH6 196 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 SOSTDC1Q6X4U4 206 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 GRINAQ7Z429 371 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 Q8IYB0 196 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 EXOC3-AS1Q8N2X6 119 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 FAM19A2Q8N3H0 131 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 ST6GALNAC3Q8NDV1 305 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 PPTC7Q8NI37 304 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 ZNF431Q8TF32 576 aaPredicted RBP0.61□□□□□ -2.31
GYPB-207ENST00000506679 PLEKHB2Q96CS7 222 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 ODF3Q96PU9 254 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 POPDC3Q9HBV1 291 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 MED29Q9NX70 200 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 PCTPQ9UKL6 214 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 U3KQ87 197 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 TECTAO75443 2155 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 PIK3C2AO00443 1686 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 PTPN13Q12923 2485 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 SYNMO15061 1565 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 TRANK1O15050 2925 aa0.61□□□□□ -2.31
GYPB-207ENST00000506679 TRPM1Q7Z4N2 1603 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 A0A087WSZ3 146 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 CCDC160A6NGH7 325 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 E7EUB6 86 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 PFDN1O60925 122 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 TRGC2P03986 189 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 IDO1P14902 403 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 SERPINB1P30740 379 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 TAS2R41P59536 307 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 ROMO1P60602 79 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 GDF5OSQ5U4N7 250 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 C3orf33Q6P1S2 294 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 CROCCP2Q86T23 111 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 CLECL1Q8IZS7 167 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 STX19Q8N4C7 294 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 SMIM20Q8N5G0 67 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 OR5D16Q8NGK9 328 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 NEK7Q8TDX7 302 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 ZNF714Q96N38 554 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 GPX7Q96SL4 187 aaPredicted RBP0.6□□□□□ -2.31
GYPB-207ENST00000506679 CENPHQ9H3R5 247 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 GID8Q9NWU2 228 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 UFC1Q9Y3C8 167 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 CHCHD2Q9Y6H1 151 aaPredicted RBP0.6□□□□□ -2.31
GYPB-207ENST00000506679 V9GYQ6 96 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 COL6A5A8TX70 2615 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 CEP164Q9UPV0 1460 aa0.6□□□□□ -2.31
GYPB-207ENST00000506679 ZNF469Q96JG9 3925 aaPredicted RBP0.59□□□□□ -2.31
GYPB-207ENST00000506679 NCOR1O75376 2440 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 ARHGEF11O15085 1522 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 MYO5AQ9Y4I1 1855 aaKnown RBP0.59□□□□□ -2.31
GYPB-207ENST00000506679 CD109Q6YHK3 1445 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 TRAV10A0A0B4J240 114 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 GPR31O00270 319 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 CCL16O15467 120 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 MFSD11O43934 449 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 HIST1H2BKO60814 126 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 ERC2-IT1O76042 136 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 CRHP06850 196 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 HIST1H2BJP06899 126 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 GNG10P50151 68 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 RAB5CP51148 216 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 VBP1P61758 197 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 CDK6Q00534 326 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 SNCBQ16143 134 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 C1orf140Q5VVS0 124 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 PPP1R2P3Q6NXS1 205 aa0.59□□□□□ -2.31
GYPB-207ENST00000506679 STX12Q86Y82 276 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms