RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 ZNF705DP0CH99 300 aaPredicted RBP6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 ZNF705BP0CI00 300 aaPredicted RBP6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 GALR1P47211 349 aa6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 SPATA31B1PQ5VZV4 182 aa6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 LGALS9CQ6DKI2 356 aa6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 GSG1LQ6UXU4 331 aa6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 ZNF705AQ6ZN79 300 aaPredicted RBP6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 CYP2G1PQ6ZSU1 146 aa6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 OR1B1Q8NGR6 318 aa6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 C20orf173Q96LM9 149 aa6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 GPR82Q96P67 336 aa6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 NEU1Q99519 415 aa6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 SHANK2-AS3Q9BTD1 123 aa6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 CCDC32Q9BV29 185 aa6.54□□□□□ -1.36
PDLIM5-209ENST00000506632 KMT2AQ03164 3969 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 A0A0J9YX75 114 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 C7orf66A4D0T2 115 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 METTL15P1P0C7V9 234 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 ORM2P19652 201 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 HLA-DMBP28068 263 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 TCTAP57738 103 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 SELENOTP62341 195 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 ARL16Q0P5N6 197 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 TOR2AQ5JU69 321 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 OR10P1Q8NGE3 313 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 LINC00052Q96N35 136 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 RSG1Q9BU20 258 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 TMEM147Q9BVK8 224 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 SCRT1Q9BWW7 348 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 SLC25A39Q9BZJ4 359 aaPredicted RBP6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 C11orf1Q9H5F2 150 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 SLC25A22Q9H936 323 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 NUDT15Q9NV35 164 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 GSKIPQ9P0R6 139 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 CELA1Q9UNI1 258 aa6.53□□□□□ -1.36
PDLIM5-209ENST00000506632 TRAV6A0A075B6T7 132 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 TRAV8-2A0A0B4J237 113 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 SMCO3A2RU48 225 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 F6UB75 175 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 CCSO14618 274 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 IL5P05113 134 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 LINC00869P0C866 280 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 S100A7P31151 101 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 RRAS2P62070 204 aaPredicted RBP6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 FAM78BQ5VT40 261 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 AMTNQ6UX39 209 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 Q6ZTC4 211 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 ZNF431Q8TF32 576 aaPredicted RBP6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 C2CD4CQ8TF44 421 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 C16orf92Q96LL3 132 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 SEC22CQ9BRL7 303 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 GGACTQ9BVM4 153 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 SLC35B3Q9H1N7 401 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 NPVFQ9HCQ7 196 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 RPRMQ9NS64 109 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 DOK5Q9P104 306 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 APLNQ9ULZ1 77 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 HIGD1AQ9Y241 93 aa6.52□□□□□ -1.37
PDLIM5-209ENST00000506632 BIRC6Q9NR09 4857 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 A0A087X0K7 114 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 TRAV10A0A0B4J240 114 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 SMIM9A6NGZ8 99 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 MRPS12O15235 138 aaKnown RBP6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 HYPMO75409 117 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 DEDDO75618 318 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 IGKV3-20P01619 116 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 RPL7P18124 248 aaKnown RBP6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 FXYD7P58549 80 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 RAP2BP61225 183 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 PSG9Q00887 426 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 IL15RAQ13261 267 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 C12orf74Q32Q52 190 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 EBLN2Q6P2I7 272 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 TEPPQ6URK8 271 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 PATE2Q6UY27 113 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 C1orf158Q8N1D5 194 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 C12orf45Q8N5I9 185 aaPredicted RBP6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 OR4B1Q8NGF8 309 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 UHRF2Q96PU4 802 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 AP5S1Q9NUS5 200 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 MGAT4CQ9UBM8 478 aa6.51□□□□□ -1.37
PDLIM5-209ENST00000506632 VPS13DQ5THJ4 4388 aa6.5□□□□□ -1.37
PDLIM5-209ENST00000506632 TMEM189A5PLL7 270 aa6.5□□□□□ -1.37
PDLIM5-209ENST00000506632 H2AFB2P0C5Z0 115 aa6.5□□□□□ -1.37
PDLIM5-209ENST00000506632 OR5G3P0C626 314 aa6.5□□□□□ -1.37
PDLIM5-209ENST00000506632 SLC38A11Q08AI6 406 aa6.5□□□□□ -1.37
PDLIM5-209ENST00000506632 ASAH1Q13510 395 aa6.5□□□□□ -1.37
PDLIM5-209ENST00000506632 ZNF846Q147U1 533 aa6.5□□□□□ -1.37
PDLIM5-209ENST00000506632 PXDC1Q5TGL8 231 aa6.5□□□□□ -1.37
PDLIM5-209ENST00000506632 ZNF546Q86UE3 836 aa6.5□□□□□ -1.37
PDLIM5-209ENST00000506632 RPP25LQ8N5L8 163 aaKnown RBP6.5□□□□□ -1.37
PDLIM5-209ENST00000506632 C2orf50Q96LR7 162 aa6.5□□□□□ -1.37
PDLIM5-209ENST00000506632 ARV1Q9H2C2 271 aa6.5□□□□□ -1.37
PDLIM5-209ENST00000506632 FAM240BA0A1B0GVZ2 78 aa6.49□□□□□ -1.37
PDLIM5-209ENST00000506632 C5orf51A6NDU8 294 aa6.49□□□□□ -1.37
PDLIM5-209ENST00000506632 IGLL5B9A064 214 aa6.49□□□□□ -1.37
PDLIM5-209ENST00000506632 FAM229AH3BQW9 127 aa6.49□□□□□ -1.37
PDLIM5-209ENST00000506632 AGPAT2O15120 278 aa6.49□□□□□ -1.37
PDLIM5-209ENST00000506632 AMBPP02760 352 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms