RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 SMIM9A6NGZ8 99 aa10.28□□□□□ -0.76
CDC42SE2-209ENST00000506419 SSSCA1O60232 199 aa10.28□□□□□ -0.76
CDC42SE2-209ENST00000506419 IFNA21P01568 189 aa10.28□□□□□ -0.76
CDC42SE2-209ENST00000506419 IL5P05113 134 aa10.28□□□□□ -0.76
CDC42SE2-209ENST00000506419 IL7P13232 177 aa10.28□□□□□ -0.76
CDC42SE2-209ENST00000506419 ARL16Q0P5N6 197 aa10.28□□□□□ -0.76
CDC42SE2-209ENST00000506419 C4orf46Q504U0 113 aa10.28□□□□□ -0.76
CDC42SE2-209ENST00000506419 AMTNQ6UX39 209 aa10.28□□□□□ -0.76
CDC42SE2-209ENST00000506419 PATE2Q6UY27 113 aa10.28□□□□□ -0.76
CDC42SE2-209ENST00000506419 TMEM147Q9BVK8 224 aa10.28□□□□□ -0.76
CDC42SE2-209ENST00000506419 SLC25A39Q9BZJ4 359 aaPredicted RBP10.28□□□□□ -0.76
CDC42SE2-209ENST00000506419 RPRMQ9NS64 109 aa10.28□□□□□ -0.76
CDC42SE2-209ENST00000506419 PKD1P98161 4303 aa10.28□□□□□ -0.76
CDC42SE2-209ENST00000506419 SMCO3A2RU48 225 aa10.27□□□□□ -0.77
CDC42SE2-209ENST00000506419 H3BRN7 92 aa10.27□□□□□ -0.77
CDC42SE2-209ENST00000506419 PRM2P04554 102 aa10.27□□□□□ -0.77
CDC42SE2-209ENST00000506419 METTL15P1P0C7V9 234 aa10.27□□□□□ -0.77
CDC42SE2-209ENST00000506419 SPART-AS1P0CW21 52 aa10.27□□□□□ -0.77
CDC42SE2-209ENST00000506419 MEOX2P50222 304 aa10.27□□□□□ -0.77
CDC42SE2-209ENST00000506419 PLP1P60201 277 aa10.27□□□□□ -0.77
CDC42SE2-209ENST00000506419 RRAS2P62070 204 aaPredicted RBP10.27□□□□□ -0.77
CDC42SE2-209ENST00000506419 IAH1Q2TAA2 248 aaPredicted RBP10.27□□□□□ -0.77
CDC42SE2-209ENST00000506419 ZBTB8BQ8NAP8 495 aaPredicted RBP10.27□□□□□ -0.77
CDC42SE2-209ENST00000506419 MITD1Q8WV92 249 aa10.27□□□□□ -0.77
CDC42SE2-209ENST00000506419 C7orf50Q9BRJ6 194 aaKnown RBP10.27□□□□□ -0.77
CDC42SE2-209ENST00000506419 SHANK2-AS3Q9BTD1 123 aa10.27□□□□□ -0.77
CDC42SE2-209ENST00000506419 DKK2Q9UBU2 259 aa10.27□□□□□ -0.77
CDC42SE2-209ENST00000506419 RFNGQ9Y644 331 aa10.27□□□□□ -0.77
CDC42SE2-209ENST00000506419 CENPXA8MT69 81 aa10.26□□□□□ -0.77
CDC42SE2-209ENST00000506419 HYPMO75409 117 aa10.26□□□□□ -0.77
CDC42SE2-209ENST00000506419 DLK1P80370 383 aa10.26□□□□□ -0.77
CDC42SE2-209ENST00000506419 SAMD13Q5VXD3 122 aa10.26□□□□□ -0.77
CDC42SE2-209ENST00000506419 RNF182Q8N6D2 247 aa10.26□□□□□ -0.77
CDC42SE2-209ENST00000506419 NPVFQ9HCQ7 196 aa10.26□□□□□ -0.77
CDC42SE2-209ENST00000506419 GSKIPQ9P0R6 139 aa10.26□□□□□ -0.77
CDC42SE2-209ENST00000506419 TMEM189A5PLL7 270 aa10.25□□□□□ -0.77
CDC42SE2-209ENST00000506419 CRXO43186 299 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE2-209ENST00000506419 SCGB1D2O95969 90 aa10.25□□□□□ -0.77
CDC42SE2-209ENST00000506419 MBPP02686 304 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE2-209ENST00000506419 CNN1P51911 297 aaKnown RBP10.25□□□□□ -0.77
CDC42SE2-209ENST00000506419 FGL1Q08830 312 aa10.25□□□□□ -0.77
CDC42SE2-209ENST00000506419 FAM222AQ5U5X8 452 aa10.25□□□□□ -0.77
CDC42SE2-209ENST00000506419 GPR82Q96P67 336 aa10.25□□□□□ -0.77
CDC42SE2-209ENST00000506419 UHRF2Q96PU4 802 aa10.25□□□□□ -0.77
CDC42SE2-209ENST00000506419 HIGD1AQ9Y241 93 aa10.25□□□□□ -0.77
CDC42SE2-209ENST00000506419 RCL1Q9Y2P8 373 aaKnown RBP10.25□□□□□ -0.77
CDC42SE2-209ENST00000506419 C7orf66A4D0T2 115 aa10.24□□□□□ -0.77
CDC42SE2-209ENST00000506419 MRPS12O15235 138 aaKnown RBP10.24□□□□□ -0.77
CDC42SE2-209ENST00000506419 AMBPP02760 352 aa10.24□□□□□ -0.77
CDC42SE2-209ENST00000506419 LINC00869P0C866 280 aa10.24□□□□□ -0.77
CDC42SE2-209ENST00000506419 PRB4P10163 310 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE2-209ENST00000506419 TAS2R30P59541 319 aa10.24□□□□□ -0.77
CDC42SE2-209ENST00000506419 SELENOTP62341 195 aa10.24□□□□□ -0.77
CDC42SE2-209ENST00000506419 OR11H7Q8NGC8 314 aa10.24□□□□□ -0.77
CDC42SE2-209ENST00000506419 OR10P1Q8NGE3 313 aa10.24□□□□□ -0.77
CDC42SE2-209ENST00000506419 IGF2BP2-AS1Q96M15 143 aa10.24□□□□□ -0.77
CDC42SE2-209ENST00000506419 GOLT1BQ9Y3E0 138 aa10.24□□□□□ -0.77
CDC42SE2-209ENST00000506419 FNDC10F2Z333 226 aa10.23□□□□□ -0.77
CDC42SE2-209ENST00000506419 K7EPK0 472 aa10.23□□□□□ -0.77
CDC42SE2-209ENST00000506419 CCSO14618 274 aa10.23□□□□□ -0.77
CDC42SE2-209ENST00000506419 TSC22D2O75157 780 aa10.23□□□□□ -0.77
CDC42SE2-209ENST00000506419 OR5G3P0C626 314 aa10.23□□□□□ -0.77
CDC42SE2-209ENST00000506419 RAP2BP61225 183 aa10.23□□□□□ -0.77
CDC42SE2-209ENST00000506419 SLC38A11Q08AI6 406 aa10.23□□□□□ -0.77
CDC42SE2-209ENST00000506419 CNPY1Q3B7I2 92 aa10.23□□□□□ -0.77
CDC42SE2-209ENST00000506419 NDUFAF3Q9BU61 184 aa10.23□□□□□ -0.77
CDC42SE2-209ENST00000506419 ARL6Q9H0F7 186 aa10.23□□□□□ -0.77
CDC42SE2-209ENST00000506419 PKHD1P08F94 4074 aa10.23□□□□□ -0.77
CDC42SE2-209ENST00000506419 LOC102723971A0A1B0GUV8 181 aa10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 ZNF705GA8MUZ8 300 aaPredicted RBP10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 M0R2Z0 102 aa10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 LYRM1O43325 122 aa10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 DUSP14O95147 198 aaKnown RBP10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 HBE1P02100 147 aa10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 TCRBP04435 133 aa10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 RPL7P18124 248 aaKnown RBP10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 CXCL3P19876 107 aa10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 S100A7P31151 101 aa10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 SPINK13Q1W4C9 94 aa10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 TEPPQ6URK8 271 aa10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 POM121L12Q8N7R1 296 aa10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 SEC22CQ9BRL7 303 aa10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 NIPSNAP3BQ9BS92 247 aa10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 C20orf85Q9H1P6 137 aa10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 ARV1Q9H2C2 271 aa10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 C11orf1Q9H5F2 150 aa10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 YTHDF2Q9Y5A9 579 aaKnown RBP10.22□□□□□ -0.77
CDC42SE2-209ENST00000506419 TRAV6A0A075B6T7 132 aa10.21□□□□□ -0.77
CDC42SE2-209ENST00000506419 A0A087X0K7 114 aa10.21□□□□□ -0.77
CDC42SE2-209ENST00000506419 AGPAT2O15120 278 aa10.21□□□□□ -0.77
CDC42SE2-209ENST00000506419 SNRPCP09234 159 aaKnown RBP10.21□□□□□ -0.77
CDC42SE2-209ENST00000506419 AZU1P20160 251 aa10.21□□□□□ -0.77
CDC42SE2-209ENST00000506419 PSG3Q16557 428 aa10.21□□□□□ -0.77
CDC42SE2-209ENST00000506419 RRN3P1Q2M238 152 aa10.21□□□□□ -0.77
CDC42SE2-209ENST00000506419 TMEM37Q8WXS4 190 aa10.21□□□□□ -0.77
CDC42SE2-209ENST00000506419 GGACTQ9BVM4 153 aa10.21□□□□□ -0.77
CDC42SE2-209ENST00000506419 MGAT4CQ9UBM8 478 aa10.21□□□□□ -0.77
CDC42SE2-209ENST00000506419 TRAV12-2A0A075B6T6 113 aa10.2□□□□□ -0.78
CDC42SE2-209ENST00000506419 OXA1LQ15070 435 aa10.2□□□□□ -0.78
CDC42SE2-209ENST00000506419 MORN5Q5VZ52 161 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms