RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 ZP3P21754 424 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 CNTFRP26992 372 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 PRB3Q04118 309 aaPredicted RBP3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 GAMTQ14353 236 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 FXYD3Q14802 87 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 PEA15Q15121 130 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 KRTAP13-3Q3SY46 172 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 C10orf55Q5SWW7 151 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 CYB5R2Q6BCY4 276 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 CTRB2Q6GPI1 263 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 Q8N377 158 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 TTC9CQ8N5M4 171 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 LINC00612Q8N6U2 182 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 Q8N9W7 124 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 THAP8Q8NA92 274 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 PCNPQ8WW12 178 aaKnown RBP3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 ZNF414Q96IQ9 312 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 RBM14Q96PK6 669 aaKnown RBP3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 ATP6V0BQ99437 205 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 TRGV9Q99603 122 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 MGST2Q99735 147 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 RASL11BQ9BPW5 248 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 GGTLC1Q9BX51 225 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 HRH4Q9H3N8 390 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 SLC39A9Q9NUM3 307 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 THYN1Q9P016 225 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 PXMP4Q9Y6I8 212 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 POLQO75417 2590 aa3.73□□□□□ -1.81
DEPDC1B-203ENST00000505017 CENPEQ02224 2701 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 UTP20O75691 2785 aaKnown RBP3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 TRAV30A0A087WSZ9 112 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 IGHV7-81A0A0B4J1V7 117 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 MAP1LC3B2A6NCE7 125 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 A6NDX4 124 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 FCN1O00602 326 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 BRI3O95415 125 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 DEFA4P12838 97 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 AREGP15514 252 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 FCGR2BP31994 310 aaPredicted RBP3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 CDC34P49427 236 aaPredicted RBP3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 PSMB3P49720 205 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 B2MP61769 119 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 RHOBP62745 196 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 CX3CL1P78423 397 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 GUK1Q16774 197 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 AKIRIN2Q53H80 203 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 KHDC3LQ587J8 217 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 CRYBG3Q68DQ2 2970 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 S100A7AQ86SG5 101 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 RPP25LQ8N5L8 163 aaKnown RBP3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 C5orf56Q8N8D9 126 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 OR10G4Q8NGN3 311 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 OR10G9Q8NGN4 311 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 OR10G7Q8NGN6 311 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 OR1L4Q8NGR5 311 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 OR4X1Q8NH49 305 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 SGMS2Q8NHU3 365 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 NANPQ8TBE9 248 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 SUN5Q8TC36 379 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 GATAD1Q8WUU5 269 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 SFT2D1Q8WV19 159 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 C17orf50Q8WW18 174 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 SSMEM1Q8WWF3 244 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 PFDN5Q99471 154 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 TXN2Q99757 166 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 TXNDC17Q9BRA2 123 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 SEC11CQ9BY50 192 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 MRPL32Q9BYC8 188 aaKnown RBP3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 MAP1LC3BQ9GZQ8 125 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 MANBALQ9NQG1 85 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 ARL2-SNX15V9GYD0 113 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 APCP25054 2843 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 TACC2O95359 2948 aa3.72□□□□□ -1.81
DEPDC1B-203ENST00000505017 FASNP49327 2511 aaKnown RBP3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 IGLV11-55A0A075B6I3 123 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 A0A0U1RQK1 487 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 A0A1W2PPV4 95 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 TCRBV4S1A1TA0A5B7 111 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 TMEM218A2RU14 115 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 RBFOX3A6NFN3 312 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 ZFP92A6NM28 416 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 H3BUA1 57 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 I3L2K1 104 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 YIF1AO95070 293 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 HSPB1P04792 205 aaKnown RBP3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 OR5G3P0C626 314 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 CD24P25063 80 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 OR10J1P30954 320 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 S100A7P31151 101 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 NPBWR1P48145 328 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 FHITP49789 147 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 RND2P52198 227 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 TAS2R45P59539 299 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 PLP1P60201 277 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 SCGB2A2Q13296 93 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 ZNF726P1Q15940 193 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 KLF17Q5JT82 389 aaPredicted RBP3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 ZNF506Q5JVG8 444 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 FAM120AOSQ5T036 256 aa3.71□□□□□ -1.82
DEPDC1B-203ENST00000505017 C10orf91Q5T1B1 145 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms