RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 TMEM222Q9H0R3 208 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 PPP1R14DQ9NXH3 145 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 PRR13Q9NZ81 148 aa4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 PAIP2BQ9ULR5 123 aaKnown RBP4.77□□□□□ -1.65
NPIPB3-203ENST00000504841 IGKV1D-37A0A075B6S9 117 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 A8MTW9 85 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 FAM25AB3EWG3 89 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 FAM25CB3EWG5 89 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 FAM25GB3EWG6 89 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 HPGDSO60760 199 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 FABP1P07148 127 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 SMIM18P0DKX4 95 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 B2MP61769 119 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 CTF1Q16619 201 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 ESRGQ1W209 222 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 AARDQ4LEZ3 155 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 FAAP20Q6NZ36 180 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 TMEM144Q7Z5S9 345 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 SELENOHQ8IZQ5 122 aaKnown RBP4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 LGI3Q8N145 548 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 OR52I2Q8NH67 350 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 RXFP4Q8TDU9 374 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 DTD1Q8TEA8 209 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 GLYATL2Q8WU03 294 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 AP3S1Q92572 193 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 C16orf74Q96GX8 76 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 NAA60Q9H7X0 242 aa4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 C14orf166Q9Y224 244 aaKnown RBP4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 MRPS16Q9Y3D3 137 aaKnown RBP4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 TIMM8BQ9Y5J9 83 aaPredicted RBP4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 FLG2Q5D862 2391 aaPredicted RBP4.76□□□□□ -1.65
NPIPB3-203ENST00000504841 APOBP04114 4563 aaKnown RBP4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 KRTAP4-8A0A0G2JLE6 195 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 A0A1W2PPQ1 181 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 GAGE12BA1L429 117 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 ZNF701M0R085 212 aaPredicted RBP4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 B3GALNT1O75752 331 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 GAGE7O76087 117 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 CDS2O95674 445 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 RAB3DO95716 219 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 IFNA5P01569 189 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 APOA1P02647 267 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 GAGE12FP0CL80 117 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 GAGE12GP0CL81 117 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 GAGE12IP0CL82 117 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 DNAH10OSP0CZ25 163 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 SULT1A3P0DMM9 295 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 SULT1A4P0DMN0 295 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 ORM2P19652 201 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 HOXA5P20719 270 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 TMBIM6P55061 237 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 TAS2R60P59551 318 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 KRTAP10-1P60331 282 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 VBP1P61758 197 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 GAMTQ14353 236 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 GPR107Q5VW38 600 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 MZT2AQ6P582 158 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 Q6ZRN7 208 aaPredicted RBP4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 OR1B1Q8NGR6 318 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 OR10J6PQ8NGY7 276 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 TERB2Q8NHR7 220 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 C15orf40Q8WUR7 153 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 UPK3BQ9BT76 320 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 RBKSQ9H477 322 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 U3KQ87 197 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 HERC1Q15751 4861 aa4.75□□□□□ -1.65
NPIPB3-203ENST00000504841 TRAV8-2A0A0B4J237 113 aa4.74□□□□□ -1.65
NPIPB3-203ENST00000504841 ZNF98A6NK75 572 aa4.74□□□□□ -1.65
NPIPB3-203ENST00000504841 IAPPP10997 89 aa4.74□□□□□ -1.65
NPIPB3-203ENST00000504841 GATA2P23769 480 aaPredicted RBP4.74□□□□□ -1.65
NPIPB3-203ENST00000504841 NCS1P62166 190 aa4.74□□□□□ -1.65
NPIPB3-203ENST00000504841 ICAM4Q14773 271 aa4.74□□□□□ -1.65
NPIPB3-203ENST00000504841 Q6ZSN1 163 aa4.74□□□□□ -1.65
NPIPB3-203ENST00000504841 TMEM256Q8N2U0 113 aa4.74□□□□□ -1.65
NPIPB3-203ENST00000504841 OR8A1Q8NGG7 326 aa4.74□□□□□ -1.65
NPIPB3-203ENST00000504841 RNASE8Q8TDE3 154 aaKnown RBP4.74□□□□□ -1.65
NPIPB3-203ENST00000504841 RAB2BQ8WUD1 216 aa4.74□□□□□ -1.65
NPIPB3-203ENST00000504841 C17orf77Q96MU5 243 aa4.74□□□□□ -1.65
NPIPB3-203ENST00000504841 TRGV9Q99603 122 aa4.74□□□□□ -1.65
NPIPB3-203ENST00000504841 RTBDNQ9BSG5 229 aaPredicted RBP4.74□□□□□ -1.65
NPIPB3-203ENST00000504841 TMEM147Q9BVK8 224 aa4.74□□□□□ -1.65
NPIPB3-203ENST00000504841 TNFRSF18Q9Y5U5 241 aa4.74□□□□□ -1.65
NPIPB3-203ENST00000504841 IGKV1OR2-108A0A075B7D4 117 aa4.73□□□□□ -1.65
NPIPB3-203ENST00000504841 CRYM-AS1A6NIL9 109 aa4.73□□□□□ -1.65
NPIPB3-203ENST00000504841 J3KRW8 73 aa4.73□□□□□ -1.65
NPIPB3-203ENST00000504841 ADAP1O75689 374 aa4.73□□□□□ -1.65
NPIPB3-203ENST00000504841 RLN2P04090 185 aa4.73□□□□□ -1.65
NPIPB3-203ENST00000504841 TBPP20226 339 aa4.73□□□□□ -1.65
NPIPB3-203ENST00000504841 GPX4P36969 197 aaPredicted RBP4.73□□□□□ -1.65
NPIPB3-203ENST00000504841 TAS2R19P59542 299 aa4.73□□□□□ -1.65
NPIPB3-203ENST00000504841 AKR1C1Q04828 323 aa4.73□□□□□ -1.65
NPIPB3-203ENST00000504841 SMCO1Q147U7 214 aa4.73□□□□□ -1.65
NPIPB3-203ENST00000504841 STEAP1BQ6NZ63 245 aa4.73□□□□□ -1.65
NPIPB3-203ENST00000504841 CCDC28AQ8IWP9 274 aa4.73□□□□□ -1.65
NPIPB3-203ENST00000504841 OR1S1Q8NH92 325 aa4.73□□□□□ -1.65
NPIPB3-203ENST00000504841 TMEM263Q8WUH6 116 aaKnown RBP4.73□□□□□ -1.65
NPIPB3-203ENST00000504841 ZNF503Q96F45 646 aa4.73□□□□□ -1.65
NPIPB3-203ENST00000504841 PARD6GQ9BYG4 376 aaPredicted RBP4.73□□□□□ -1.65
NPIPB3-203ENST00000504841 TMPRSS5Q9H3S3 457 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms