RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 ACOT13Q9NPJ3 140 aa8.22□□□□□ -1.09
LSM6-204ENST00000504181 FUT9Q9Y231 359 aa8.22□□□□□ -1.09
LSM6-204ENST00000504181 S100GP29377 79 aa8.21□□□□□ -1.1
LSM6-204ENST00000504181 FGL1Q08830 312 aa8.21□□□□□ -1.1
LSM6-204ENST00000504181 ZNF415Q09FC8 603 aa8.21□□□□□ -1.1
LSM6-204ENST00000504181 DAZ2Q13117 558 aaKnown RBP8.21□□□□□ -1.1
LSM6-204ENST00000504181 PSG3Q16557 428 aa8.21□□□□□ -1.1
LSM6-204ENST00000504181 C2orf83Q53S99 150 aa8.21□□□□□ -1.1
LSM6-204ENST00000504181 C8orf59Q8N0T1 100 aaPredicted RBP8.21□□□□□ -1.1
LSM6-204ENST00000504181 OR8A1Q8NGG7 326 aa8.21□□□□□ -1.1
LSM6-204ENST00000504181 RRNAD1Q96FB5 475 aaKnown RBP8.21□□□□□ -1.1
LSM6-204ENST00000504181 HEYLQ9NQ87 328 aaPredicted RBP8.21□□□□□ -1.1
LSM6-204ENST00000504181 RHBDL2Q9NX52 303 aa8.21□□□□□ -1.1
LSM6-204ENST00000504181 PRO0255Q9UI72 69 aa8.21□□□□□ -1.1
LSM6-204ENST00000504181 TRGV1A0A0A0MS02 117 aa8.2□□□□□ -1.1
LSM6-204ENST00000504181 IBA57-AS1B1ANH7 110 aa8.2□□□□□ -1.1
LSM6-204ENST00000504181 CRYBA4P53673 196 aa8.2□□□□□ -1.1
LSM6-204ENST00000504181 SPARTQ8N0X7 666 aa8.2□□□□□ -1.1
LSM6-204ENST00000504181 DHRSXQ8N5I4 330 aa8.2□□□□□ -1.1
LSM6-204ENST00000504181 TMEM170AQ8WVE7 144 aa8.2□□□□□ -1.1
LSM6-204ENST00000504181 C8orf49Q96NF6 230 aa8.2□□□□□ -1.1
LSM6-204ENST00000504181 C20orf144Q9BQM9 153 aa8.2□□□□□ -1.1
LSM6-204ENST00000504181 PARD6GQ9BYG4 376 aaPredicted RBP8.2□□□□□ -1.1
LSM6-204ENST00000504181 IFT46Q9NQC8 304 aa8.2□□□□□ -1.1
LSM6-204ENST00000504181 ZFP92A6NM28 416 aa8.19□□□□□ -1.1
LSM6-204ENST00000504181 GYPEP15421 78 aa8.19□□□□□ -1.1
LSM6-204ENST00000504181 SRIP30626 198 aa8.19□□□□□ -1.1
LSM6-204ENST00000504181 MLLT11Q13015 90 aaPredicted RBP8.19□□□□□ -1.1
LSM6-204ENST00000504181 OR2F1Q13607 317 aa8.19□□□□□ -1.1
LSM6-204ENST00000504181 GFI1BQ5VTD9 330 aa8.19□□□□□ -1.1
LSM6-204ENST00000504181 A0A0G2JRQ6 117 aa8.18□□□□□ -1.1
LSM6-204ENST00000504181 RBFOX3A6NFN3 312 aa8.18□□□□□ -1.1
LSM6-204ENST00000504181 E5RGE8 158 aa8.18□□□□□ -1.1
LSM6-204ENST00000504181 K7EQD1 137 aa8.18□□□□□ -1.1
LSM6-204ENST00000504181 SCAND1P57086 179 aa8.18□□□□□ -1.1
LSM6-204ENST00000504181 OR5H2Q8NGV7 314 aa8.18□□□□□ -1.1
LSM6-204ENST00000504181 AUNIPQ9H7T9 357 aa8.18□□□□□ -1.1
LSM6-204ENST00000504181 HHLA3Q9XRX5 114 aa8.18□□□□□ -1.1
LSM6-204ENST00000504181 IGKV1D-37A0A075B6S9 117 aa8.17□□□□□ -1.1
LSM6-204ENST00000504181 IGHV3-38A0A0C4DH36 116 aa8.17□□□□□ -1.1
LSM6-204ENST00000504181 J3KRW8 73 aa8.17□□□□□ -1.1
LSM6-204ENST00000504181 GATA2P23769 480 aaPredicted RBP8.17□□□□□ -1.1
LSM6-204ENST00000504181 SPCS3P61009 180 aa8.17□□□□□ -1.1
LSM6-204ENST00000504181 KLF9Q13886 244 aaPredicted RBP8.17□□□□□ -1.1
LSM6-204ENST00000504181 OR1B1Q8NGR6 318 aa8.17□□□□□ -1.1
LSM6-204ENST00000504181 TMEM37Q8WXS4 190 aa8.17□□□□□ -1.1
LSM6-204ENST00000504181 GSN-AS1Q9NRJ2 163 aa8.17□□□□□ -1.1
LSM6-204ENST00000504181 NOTOA8MTQ0 251 aa8.16□□□□□ -1.1
LSM6-204ENST00000504181 SNRPGP15A8MWD9 76 aa8.16□□□□□ -1.1
LSM6-204ENST00000504181 C22orf42Q6IC83 251 aa8.16□□□□□ -1.1
LSM6-204ENST00000504181 LPCAT3Q6P1A2 487 aa8.16□□□□□ -1.1
LSM6-204ENST00000504181 CCDC190Q86UF4 302 aa8.16□□□□□ -1.1
LSM6-204ENST00000504181 RNASE11Q8TAA1 199 aaKnown RBP8.16□□□□□ -1.1
LSM6-204ENST00000504181 SLC25A38Q96DW6 304 aa8.16□□□□□ -1.1
LSM6-204ENST00000504181 ST6GAL2Q96JF0 529 aa8.16□□□□□ -1.1
LSM6-204ENST00000504181 TP53RKQ96S44 253 aa8.16□□□□□ -1.1
LSM6-204ENST00000504181 MGLLQ99685 303 aa8.16□□□□□ -1.1
LSM6-204ENST00000504181 DPH3P1Q9H4G8 78 aa8.16□□□□□ -1.1
LSM6-204ENST00000504181 TRAV12-3A0A0B4J271 114 aa8.15□□□□□ -1.1
LSM6-204ENST00000504181 CEBPZOSA8MTT3 80 aa8.15□□□□□ -1.1
LSM6-204ENST00000504181 TNFSF8P32971 234 aa8.15□□□□□ -1.1
LSM6-204ENST00000504181 SLAQ13239 276 aa8.15□□□□□ -1.1
LSM6-204ENST00000504181 FHL2Q14192 279 aa8.15□□□□□ -1.1
LSM6-204ENST00000504181 TRIM16LQ309B1 348 aa8.15□□□□□ -1.1
LSM6-204ENST00000504181 TDRG1Q3Y452 100 aa8.15□□□□□ -1.1
LSM6-204ENST00000504181 LINC01556Q5JQF7 62 aa8.15□□□□□ -1.1
LSM6-204ENST00000504181 MORN5Q5VZ52 161 aa8.15□□□□□ -1.1
LSM6-204ENST00000504181 THAP8Q8NA92 274 aa8.15□□□□□ -1.1
LSM6-204ENST00000504181 OR5H6Q8NGV6 325 aa8.15□□□□□ -1.1
LSM6-204ENST00000504181 TM2D2Q9BX73 214 aa8.15□□□□□ -1.1
LSM6-204ENST00000504181 S100A14Q9HCY8 104 aa8.15□□□□□ -1.1
LSM6-204ENST00000504181 DIABLOQ9NR28 239 aa8.15□□□□□ -1.1
LSM6-204ENST00000504181 A0A0U1RQV1 116 aa8.14□□□□□ -1.11
LSM6-204ENST00000504181 ATG12O94817 140 aa8.14□□□□□ -1.11
LSM6-204ENST00000504181 IGHV3-30P01768 117 aa8.14□□□□□ -1.11
LSM6-204ENST00000504181 IGHV3-33P01772 117 aa8.14□□□□□ -1.11
LSM6-204ENST00000504181 IGHV3-30-3P0DP02 117 aa8.14□□□□□ -1.11
LSM6-204ENST00000504181 IGHV3-30-5P0DP03 117 aa8.14□□□□□ -1.11
LSM6-204ENST00000504181 TAS2R46P59540 309 aa8.14□□□□□ -1.11
LSM6-204ENST00000504181 C9orf47Q6ZRZ4 202 aa8.14□□□□□ -1.11
LSM6-204ENST00000504181 C11orf72Q8NBR9 251 aa8.14□□□□□ -1.11
LSM6-204ENST00000504181 BLNKQ8WV28 456 aa8.14□□□□□ -1.11
LSM6-204ENST00000504181 PCNPQ8WW12 178 aaKnown RBP8.14□□□□□ -1.11
LSM6-204ENST00000504181 SPINK4O60575 86 aa8.13□□□□□ -1.11
LSM6-204ENST00000504181 FABP1P07148 127 aa8.13□□□□□ -1.11
LSM6-204ENST00000504181 CXCL3P19876 107 aa8.13□□□□□ -1.11
LSM6-204ENST00000504181 HRH1P35367 487 aa8.13□□□□□ -1.11
LSM6-204ENST00000504181 TSPAN5P62079 268 aa8.13□□□□□ -1.11
LSM6-204ENST00000504181 NMSQ5H8A3 153 aa8.13□□□□□ -1.11
LSM6-204ENST00000504181 OR4D5Q8NGN0 318 aa8.13□□□□□ -1.11
LSM6-204ENST00000504181 BAALCQ8WXS3 180 aa8.13□□□□□ -1.11
LSM6-204ENST00000504181 RPUSD4Q96CM3 377 aaKnown RBP8.13□□□□□ -1.11
LSM6-204ENST00000504181 GPR82Q96P67 336 aa8.13□□□□□ -1.11
LSM6-204ENST00000504181 PYGO2Q9BRQ0 406 aa8.13□□□□□ -1.11
LSM6-204ENST00000504181 PAXXQ9BUH6 204 aa8.13□□□□□ -1.11
LSM6-204ENST00000504181 MRPL32Q9BYC8 188 aaKnown RBP8.13□□□□□ -1.11
LSM6-204ENST00000504181 MRPL16Q9NX20 251 aaKnown RBP8.13□□□□□ -1.11
LSM6-204ENST00000504181 CACNG5Q9UF02 275 aa8.13□□□□□ -1.11
LSM6-204ENST00000504181 KLF12Q9Y4X4 402 aa8.13□□□□□ -1.11
LSM6-204ENST00000504181 TRGV4A0A0C4DH28 118 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms