RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 CDIP1Q9H305 208 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 GLIPR2Q9H4G4 154 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 H1FXQ92522 213 aaKnown RBP5.05□□□□□ -1.6
CLCN3-204ENST00000504131 C1orf159Q96HA4 380 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 IGKV3D-7A0A0C4DH55 119 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 COX7A2LO14548 114 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 RPS21P63220 83 aaKnown RBP5.05□□□□□ -1.6
CLCN3-204ENST00000504131 TMEM14EPQ6UXP3 125 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 SLC25A45Q8N413 288 aa5.05□□□□□ -1.6
CLCN3-204ENST00000504131 IGHV5-10-1A0A0J9YXX1 117 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 TCL1BO95988 128 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 PSMB8P28062 276 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 FAM53AQ6NSI3 398 aaPredicted RBP5.04□□□□□ -1.6
CLCN3-204ENST00000504131 DOCK3Q8IZD9 2030 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 C17orf51A8MQB3 221 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 RPL18Q07020 188 aaKnown RBP5.04□□□□□ -1.6
CLCN3-204ENST00000504131 WDR86Q86TI4 376 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 SCN10AQ9Y5Y9 1956 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 SCN8AQ9UQD0 1980 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 OR52N5Q8NH56 324 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 GTSF1Q8WW33 167 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 ELSPBP1Q96BH3 223 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 FANCD2OSQ96PS1 177 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 SLC50A1Q9BRV3 221 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 NINQ8N4C6 2090 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 SCO2A0A1W2PP80 73 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 C4orf51C9J302 202 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 TMEM200BQ69YZ2 307 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 Q6ZQT7 251 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 Q8N1Y9 231 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 VOPP1Q96AW1 172 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 FOXQ1Q9C009 403 aa5.04□□□□□ -1.6
CLCN3-204ENST00000504131 A0A0A0MQY5 61 aa5.03□□□□□ -1.6
CLCN3-204ENST00000504131 E9PLD3 99 aa5.03□□□□□ -1.6
CLCN3-204ENST00000504131 HLA-DMBP28068 263 aa5.03□□□□□ -1.6
CLCN3-204ENST00000504131 RPL18AQ02543 176 aaKnown RBP5.03□□□□□ -1.6
CLCN3-204ENST00000504131 PLGLAQ15195 96 aa5.03□□□□□ -1.6
CLCN3-204ENST00000504131 ZNF799Q96GE5 643 aa5.03□□□□□ -1.6
CLCN3-204ENST00000504131 SPRY3O43610 288 aa5.03□□□□□ -1.6
CLCN3-204ENST00000504131 C10orf128Q5T292 105 aa5.03□□□□□ -1.6
CLCN3-204ENST00000504131 AJUBAQ96IF1 538 aa5.03□□□□□ -1.6
CLCN3-204ENST00000504131 FER1L6Q2WGJ9 1857 aa5.03□□□□□ -1.6
CLCN3-204ENST00000504131 CLLU1OSQ5K130 101 aa5.03□□□□□ -1.6
CLCN3-204ENST00000504131 IGHV1-58A0A0C4DH39 117 aa5.03□□□□□ -1.6
CLCN3-204ENST00000504131 SHISA3A0PJX4 238 aa5.03□□□□□ -1.6
CLCN3-204ENST00000504131 INS-IGF2F8WCM5 200 aa5.03□□□□□ -1.6
CLCN3-204ENST00000504131 ZNF672Q499Z4 452 aaPredicted RBP5.03□□□□□ -1.6
CLCN3-204ENST00000504131 YPEL1O60688 119 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 PFN3P60673 137 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 BLCAPP62952 87 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 SCN9AQ15858 1988 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 MYO9BQ13459 2157 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 WDR90Q96KV7 1748 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 M0R381 172 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 FAM104BQ5XKR9 115 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 C4orf45Q96LM5 186 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 SIPA1L1O43166 1804 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 PARP14Q460N5 1801 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 LINC00311Q8N616 119 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 C11orf45Q8TAV5 145 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 CLEC2BQ92478 149 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 TCRBV4S1A1TA0A5B7 111 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 ARL14EPLP0DKL9 152 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 KIAA0040Q15053 153 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 CR1LQ2VPA4 569 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 SAP25Q8TEE9 199 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 Q96M85 177 aa5.02□□□□□ -1.61
CLCN3-204ENST00000504131 IQCF6A8MYZ5 107 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 CHKB-CPT1BH3BT56 60 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 K7EMI3 77 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 GYPEP15421 78 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 ZC2HC1BQ5TFG8 222 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 MKXQ8IYA7 352 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 TMEM75Q8N9X5 138 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 RASL10AQ92737 203 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 PLA2G2EQ9NZK7 142 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 PRO1854Q9UHT4 67 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 HIGD1CA8MV81 97 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 K7ESM1 405 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 SS18Q15532 418 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 MDS2Q8NDY4 140 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 SHANK2-AS3Q9BTD1 123 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 CXCL16Q9H2A7 254 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 EP400Q96L91 3159 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 VWC2LB2RUY7 222 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 PCP2Q8IVA1 136 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 FDCSPQ8NFU4 85 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 CXCL6P80162 114 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 LPAL2Q16609 132 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 ZNF793Q6ZN11 406 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 PLXDC1Q8IUK5 500 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 HIGD1BQ9P298 99 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 TP73-AS1Q9UF72 201 aa5.01□□□□□ -1.61
CLCN3-204ENST00000504131 A6NED7 52 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 C15orf62A8K5M9 175 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 SOCS3O14543 225 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 SEM1Q6ZVN7 128 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 ORMDL3Q8N138 153 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 SLC22A18ASQ8N1D0 253 aa5□□□□□ -1.61
CLCN3-204ENST00000504131 TRGV9Q99603 122 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms