RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 OTORQ9NRC9 128 aa16.63■□□□□ 0.25
UBE2D3-216ENST00000503742 OSTCQ9NRP0 149 aa16.63■□□□□ 0.25
UBE2D3-216ENST00000503742 IL36BQ9NZH7 164 aa16.63■□□□□ 0.25
UBE2D3-216ENST00000503742 MAP1AP78559 2803 aaPredicted RBP16.63■□□□□ 0.25
UBE2D3-216ENST00000503742 TRAV34A0A0B4J273 112 aa16.62■□□□□ 0.25
UBE2D3-216ENST00000503742 ISLRO14498 428 aa16.62■□□□□ 0.25
UBE2D3-216ENST00000503742 GATCO43716 136 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-216ENST00000503742 DEFB113Q30KQ7 82 aa16.62■□□□□ 0.25
UBE2D3-216ENST00000503742 LRRC75A-AS1Q8N1F1 130 aa16.62■□□□□ 0.25
UBE2D3-216ENST00000503742 BTF3L4Q96K17 158 aa16.62■□□□□ 0.25
UBE2D3-216ENST00000503742 RNF24Q9Y225 148 aa16.62■□□□□ 0.25
UBE2D3-216ENST00000503742 TRAV41A0A0B4J266 112 aa16.62■□□□□ 0.25
UBE2D3-216ENST00000503742 J3QLI3 93 aa16.62■□□□□ 0.25
UBE2D3-216ENST00000503742 SLC17A3O00476 420 aa16.62■□□□□ 0.25
UBE2D3-216ENST00000503742 LY6EQ16553 131 aa16.62■□□□□ 0.25
UBE2D3-216ENST00000503742 PYY3Q5JQD4 70 aa16.62■□□□□ 0.25
UBE2D3-216ENST00000503742 FAM209BQ5JX69 171 aa16.62■□□□□ 0.25
UBE2D3-216ENST00000503742 ATG101Q9BSB4 218 aa16.62■□□□□ 0.25
UBE2D3-216ENST00000503742 PTPN13Q12923 2485 aa16.61■□□□□ 0.25
UBE2D3-216ENST00000503742 TRBV19A0A075B6N1 114 aa16.61■□□□□ 0.25
UBE2D3-216ENST00000503742 HIST3H2BBQ8N257 126 aa16.61■□□□□ 0.25
UBE2D3-216ENST00000503742 OR4F17Q8NGA8 305 aa16.61■□□□□ 0.25
UBE2D3-216ENST00000503742 TMEM190Q8WZ59 177 aa16.61■□□□□ 0.25
UBE2D3-216ENST00000503742 TCRAP04437 139 aa16.6■□□□□ 0.25
UBE2D3-216ENST00000503742 IGF1P05019 195 aa16.6■□□□□ 0.25
UBE2D3-216ENST00000503742 TRGC1P0CF51 173 aa16.6■□□□□ 0.25
UBE2D3-216ENST00000503742 GPR183P32249 361 aa16.6■□□□□ 0.25
UBE2D3-216ENST00000503742 BAGE2Q86Y30 109 aa16.6■□□□□ 0.25
UBE2D3-216ENST00000503742 CCDC140Q96MF4 163 aa16.6■□□□□ 0.25
UBE2D3-216ENST00000503742 RNASE7Q9H1E1 156 aaKnown RBP16.6■□□□□ 0.25
UBE2D3-216ENST00000503742 USP9YO00507 2555 aaPredicted RBP16.6■□□□□ 0.25
UBE2D3-216ENST00000503742 POLQO75417 2590 aa16.59■□□□□ 0.25
UBE2D3-216ENST00000503742 TRAV9-1A0A075B6T8 112 aa16.59■□□□□ 0.25
UBE2D3-216ENST00000503742 RNF223E7ERA6 249 aa16.59■□□□□ 0.25
UBE2D3-216ENST00000503742 M0QZK8 103 aa16.59■□□□□ 0.25
UBE2D3-216ENST00000503742 IGHG2P01859 326 aa16.59■□□□□ 0.25
UBE2D3-216ENST00000503742 CLEC3BP05452 202 aa16.59■□□□□ 0.25
UBE2D3-216ENST00000503742 MGST1P10620 155 aaKnown RBP16.59■□□□□ 0.25
UBE2D3-216ENST00000503742 NHLRC2Q8NBF2 726 aa16.59■□□□□ 0.25
UBE2D3-216ENST00000503742 MAPK1IP1LQ8NDC0 245 aa16.59■□□□□ 0.25
UBE2D3-216ENST00000503742 C17orf77Q96MU5 243 aa16.59■□□□□ 0.25
UBE2D3-216ENST00000503742 ZNF320A2RRD8 509 aa16.58■□□□□ 0.25
UBE2D3-216ENST00000503742 LYPD1Q8N2G4 141 aa16.58■□□□□ 0.25
UBE2D3-216ENST00000503742 SMIM12Q96EX1 92 aa16.58■□□□□ 0.25
UBE2D3-216ENST00000503742 MS4A10Q96PG2 267 aa16.58■□□□□ 0.25
UBE2D3-216ENST00000503742 PITPNC1Q9UKF7 332 aa16.58■□□□□ 0.25
UBE2D3-216ENST00000503742 TRBV7-1A0A0A6YYK4 115 aa16.58■□□□□ 0.24
UBE2D3-216ENST00000503742 TGFAP01135 160 aa16.58■□□□□ 0.24
UBE2D3-216ENST00000503742 UBE2G1P62253 170 aa16.58■□□□□ 0.24
UBE2D3-216ENST00000503742 C9orf152Q5JTZ5 239 aa16.58■□□□□ 0.24
UBE2D3-216ENST00000503742 IBA57Q5T440 356 aaKnown RBP16.58■□□□□ 0.24
UBE2D3-216ENST00000503742 SIGLEC15Q6ZMC9 328 aa16.58■□□□□ 0.24
UBE2D3-216ENST00000503742 EXOC3-AS1Q8N2X6 119 aa16.58■□□□□ 0.24
UBE2D3-216ENST00000503742 EEF1AKMT3Q96AZ1 226 aa16.58■□□□□ 0.24
UBE2D3-216ENST00000503742 FMC1Q96HJ9 113 aa16.58■□□□□ 0.24
UBE2D3-216ENST00000503742 CR1P17927 2039 aa16.57■□□□□ 0.24
UBE2D3-216ENST00000503742 ACTL10Q5JWF8 245 aa16.57■□□□□ 0.24
UBE2D3-216ENST00000503742 FAM231DQ6ZW35 169 aa16.57■□□□□ 0.24
UBE2D3-216ENST00000503742 OR10D4PQ8NGN7 298 aa16.57■□□□□ 0.24
UBE2D3-216ENST00000503742 ZFAND3Q9H8U3 227 aa16.57■□□□□ 0.24
UBE2D3-216ENST00000503742 RABAC1Q9UI14 185 aa16.57■□□□□ 0.24
UBE2D3-216ENST00000503742 LINC00527Q9UJ94 153 aa16.57■□□□□ 0.24
UBE2D3-216ENST00000503742 RPH3ALQ9UNE2 315 aa16.57■□□□□ 0.24
UBE2D3-216ENST00000503742 RPL15P61313 204 aaKnown RBP16.57■□□□□ 0.24
UBE2D3-216ENST00000503742 RPEL1Q2QD12 228 aa16.57■□□□□ 0.24
UBE2D3-216ENST00000503742 Q5PR19 223 aa16.57■□□□□ 0.24
UBE2D3-216ENST00000503742 TOMM20LQ6UXN7 152 aa16.57■□□□□ 0.24
UBE2D3-216ENST00000503742 ATP6V0BQ99437 205 aa16.57■□□□□ 0.24
UBE2D3-216ENST00000503742 MLST8Q9BVC4 326 aa16.57■□□□□ 0.24
UBE2D3-216ENST00000503742 CENPEQ02224 2701 aa16.56■□□□□ 0.24
UBE2D3-216ENST00000503742 FAM223BA6NKX1 122 aa16.56■□□□□ 0.24
UBE2D3-216ENST00000503742 BRI3O95415 125 aa16.56■□□□□ 0.24
UBE2D3-216ENST00000503742 IGHV4-31P0DP07 118 aa16.56■□□□□ 0.24
UBE2D3-216ENST00000503742 PDE6HQ13956 83 aa16.56■□□□□ 0.24
UBE2D3-216ENST00000503742 CLEC19AQ6UXS0 136 aa16.56■□□□□ 0.24
UBE2D3-216ENST00000503742 FAM223AQ8IWN6 122 aa16.56■□□□□ 0.24
UBE2D3-216ENST00000503742 GPR82Q96P67 336 aa16.56■□□□□ 0.24
UBE2D3-216ENST00000503742 BMPR1BO00238 502 aa16.55■□□□□ 0.24
UBE2D3-216ENST00000503742 LTAP01374 205 aa16.55■□□□□ 0.24
UBE2D3-216ENST00000503742 PPIFP30405 207 aaKnown RBP16.55■□□□□ 0.24
UBE2D3-216ENST00000503742 ATP5G2Q06055 141 aa16.55■□□□□ 0.24
UBE2D3-216ENST00000503742 SGK494Q96LW2 274 aa16.55■□□□□ 0.24
UBE2D3-216ENST00000503742 BLCAPP62952 87 aa16.55■□□□□ 0.24
UBE2D3-216ENST00000503742 CMTM2Q8TAZ6 248 aa16.55■□□□□ 0.24
UBE2D3-216ENST00000503742 GPR61Q9BZJ8 451 aa16.55■□□□□ 0.24
UBE2D3-216ENST00000503742 KMT2BQ9UMN6 2715 aaPredicted RBP16.54■□□□□ 0.24
UBE2D3-216ENST00000503742 CSPG4Q6UVK1 2322 aa16.54■□□□□ 0.24
UBE2D3-216ENST00000503742 RPL7P18124 248 aaKnown RBP16.54■□□□□ 0.24
UBE2D3-216ENST00000503742 DEFB112Q30KQ8 113 aa16.54■□□□□ 0.24
UBE2D3-216ENST00000503742 IGHV3-35A0A0C4DH35 117 aa16.53■□□□□ 0.24
UBE2D3-216ENST00000503742 FSHBP01225 129 aa16.53■□□□□ 0.24
UBE2D3-216ENST00000503742 TRBV6-1A0A0K0K1D8 114 aa16.53■□□□□ 0.24
UBE2D3-216ENST00000503742 IGLV2-11P01706 119 aa16.53■□□□□ 0.24
UBE2D3-216ENST00000503742 S100A7P31151 101 aa16.53■□□□□ 0.24
UBE2D3-216ENST00000503742 Q6ZS46 218 aa16.53■□□□□ 0.24
UBE2D3-216ENST00000503742 KRTAP1-3Q8IUG1 177 aa16.53■□□□□ 0.24
UBE2D3-216ENST00000503742 TMEM183AQ8IXX5 376 aa16.53■□□□□ 0.24
UBE2D3-216ENST00000503742 MBD6Q96DN6 1003 aa16.53■□□□□ 0.24
UBE2D3-216ENST00000503742 SMIM27A0A1W2PRY6 76 aa16.52■□□□□ 0.24
UBE2D3-216ENST00000503742 H3BUA1 57 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms