RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 LGALS1P09382 135 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 IGLC2P0DOY2 106 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 MYCNOSP40205 109 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 TAS2R45P59539 299 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 UBE2L3P68036 154 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 RELQ04864 619 aaPredicted RBP5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 GUCA2BQ16661 112 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 CCDC28AQ8IWP9 274 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 TMEM190Q8WZ59 177 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 NARS2Q96I59 477 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 UBE2E2Q96LR5 201 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 SLC35B3Q9H1N7 401 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 OR51M1Q9H341 326 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 SMDT1Q9H4I9 107 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 ZNF586Q9NXT0 402 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 TMEM14CQ9P0S9 112 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 PEF1Q9UBV8 284 aaKnown RBP5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 SMAD5-AS1Q9Y6J3 95 aa5.28□□□□□ -1.56
TOPBP1-203ENST00000503464 C2CD3Q4AC94 2353 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 IGHV4OR15-8A0A075B7B6 117 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 A0A087WW49 117 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 IGHV3-49A0A0A0MS15 119 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 C11orf94C9JXX5 98 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 SLC17A3O00476 420 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 NDUFA4O00483 81 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 BUB3O43684 328 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 GGCTO75223 188 aaKnown RBP5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 SCGB2A1O75556 95 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 CD28P10747 220 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 CRYBB3P26998 211 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 PROK1P58294 105 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 KRTAP10-3P60369 221 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 DEFB136Q30KP8 78 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 FAM209BQ5JX69 171 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 LCE3BQ5TA77 95 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 ATRAIDQ6UW56 229 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 OR4F5Q8NH21 305 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 OR4F4Q96R69 305 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 SEC11CQ9BY50 192 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 TMEM167BQ9NRX6 74 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 RABAC1Q9UI14 185 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 ARL2-SNX15V9GYD0 113 aa5.27□□□□□ -1.57
TOPBP1-203ENST00000503464 TRBV20OR9-2A0A075B6H5 130 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 TRBV19A0A075B6N1 114 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 IGHV3OR16-13A0A075B7E8 117 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 IGHV3-74A0A0B4J1X5 117 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 IGHV3-66A0A0C4DH42 116 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 SCO2A0A1W2PP80 73 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 A0A1W2PRE2 83 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 ADARB2-AS1A8MUL3 147 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 F8W036 122 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 TMEM250H0YL14 139 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 TCF21O43680 179 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 NDUFS6O75380 124 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 SCO1O75880 301 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 NBEAP1P0C6P0 100 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 HIST1H1EP10412 219 aaKnown RBP5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 CDX1P47902 265 aaPredicted RBP5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 CST9LP1Q5W188 147 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 SIGLEC15Q6ZMC9 328 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 GPHB5Q86YW7 130 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 STXBP6Q8NFX7 210 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 BLNKQ8WV28 456 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 C4orf3Q8WVX3 66 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 GLMPQ8WWB7 406 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 C11orf52Q96A22 123 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 JMJD8Q96S16 334 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 DERL1Q9BUN8 251 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 C20orf24Q9BUV8 137 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 ELOVL1Q9BW60 279 aa5.26□□□□□ -1.57
TOPBP1-203ENST00000503464 A0A087X0K7 114 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 TMEM213A2RRL7 107 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 APOC3P02656 99 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 CRYBA1P05813 215 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 PRB4P10163 310 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 HOXD3P31249 432 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 TAGLN2P37802 199 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 CEBPGP53567 150 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 SLURP1P55000 103 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 GNG5P63218 68 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 TM4SF20Q53R12 229 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 SOHLH1Q5JUK2 328 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 C16orf54Q6UWD8 224 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 ADAMTSL5Q6ZMM2 481 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 REC114Q7Z4M0 266 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 BPIFA4PQ86YQ2 179 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 EXOC3-AS1Q8N2X6 119 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 C11orf44Q8N8P7 122 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 C2CD4CQ8TF44 421 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 DUX3Q96PT4 197 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 METTL26Q96S19 204 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 CITED2Q99967 270 aaPredicted RBP5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 PARLQ9H300 379 aa5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 TEP1Q99973 2627 aaKnown RBP5.25□□□□□ -1.57
TOPBP1-203ENST00000503464 SETD2Q9BYW2 2564 aaPredicted RBP5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 IGHV7-4-1A0A0J9YVY3 117 aa5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 A8MWP6 167 aa5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 F6UZH7 168 aa5.24□□□□□ -1.57
TOPBP1-203ENST00000503464 PDE6DO43924 150 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms