RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 HRH4Q9H3N8 390 aa11.72□□□□□ -0.53
SCLT1-204ENST00000503215 SEPSECSQ9HD40 501 aaKnown RBP11.72□□□□□ -0.53
SCLT1-204ENST00000503215 APLNQ9ULZ1 77 aa11.72□□□□□ -0.53
SCLT1-204ENST00000503215 TMED3Q9Y3Q3 217 aa11.72□□□□□ -0.53
SCLT1-204ENST00000503215 VPS13DQ5THJ4 4388 aa11.72□□□□□ -0.53
SCLT1-204ENST00000503215 HMSDA8MTL9 139 aa11.71□□□□□ -0.53
SCLT1-204ENST00000503215 H3BP45 60 aa11.71□□□□□ -0.53
SCLT1-204ENST00000503215 SMLR1H3BR10 107 aa11.71□□□□□ -0.53
SCLT1-204ENST00000503215 MPC2O95563 127 aa11.71□□□□□ -0.53
SCLT1-204ENST00000503215 IL5P05113 134 aa11.71□□□□□ -0.53
SCLT1-204ENST00000503215 HLA-DRB4P13762 266 aa11.71□□□□□ -0.53
SCLT1-204ENST00000503215 RAB11AP62491 216 aa11.71□□□□□ -0.53
SCLT1-204ENST00000503215 OPCMLQ14982 345 aa11.71□□□□□ -0.53
SCLT1-204ENST00000503215 SPANXN5Q5MJ07 72 aa11.71□□□□□ -0.53
SCLT1-204ENST00000503215 C17orf77Q96MU5 243 aa11.71□□□□□ -0.53
SCLT1-204ENST00000503215 HLA-DRB4X5D2U9 266 aa11.71□□□□□ -0.53
SCLT1-204ENST00000503215 C9orf170A2RU37 121 aa11.7□□□□□ -0.54
SCLT1-204ENST00000503215 MED6O75586 246 aa11.7□□□□□ -0.54
SCLT1-204ENST00000503215 NKX2-1P43699 371 aaPredicted RBP11.7□□□□□ -0.54
SCLT1-204ENST00000503215 FLI1Q01543 452 aaPredicted RBP11.7□□□□□ -0.54
SCLT1-204ENST00000503215 C20orf173Q96LM9 149 aa11.7□□□□□ -0.54
SCLT1-204ENST00000503215 SCRT1Q9BWW7 348 aa11.7□□□□□ -0.54
SCLT1-204ENST00000503215 GPN1Q9HCN4 374 aaPredicted RBP11.7□□□□□ -0.54
SCLT1-204ENST00000503215 F6UB75 175 aa11.69□□□□□ -0.54
SCLT1-204ENST00000503215 POLR2GP62487 172 aaKnown RBP eCLIP11.69□□□□□ -0.54
SCLT1-204ENST00000503215 C12orf74Q32Q52 190 aa11.69□□□□□ -0.54
SCLT1-204ENST00000503215 C1orf194Q5T5A4 169 aa11.69□□□□□ -0.54
SCLT1-204ENST00000503215 OR8I2Q8N0Y5 310 aa11.69□□□□□ -0.54
SCLT1-204ENST00000503215 PIGBOS1A0A0B4J2F0 54 aa11.68□□□□□ -0.54
SCLT1-204ENST00000503215 SSNA1O43805 119 aa11.68□□□□□ -0.54
SCLT1-204ENST00000503215 NDUFB6O95139 128 aa11.68□□□□□ -0.54
SCLT1-204ENST00000503215 B2MP61769 119 aa11.68□□□□□ -0.54
SCLT1-204ENST00000503215 ID3Q02535 119 aa11.68□□□□□ -0.54
SCLT1-204ENST00000503215 CIB3Q96Q77 187 aaPredicted RBP11.68□□□□□ -0.54
SCLT1-204ENST00000503215 SLC25A32Q9H2D1 315 aa11.68□□□□□ -0.54
SCLT1-204ENST00000503215 SAV1Q9H4B6 383 aaPredicted RBP11.68□□□□□ -0.54
SCLT1-204ENST00000503215 DNAH10Q8IVF4 4471 aa11.68□□□□□ -0.54
SCLT1-204ENST00000503215 FABP1P07148 127 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 ANXA7P20073 488 aaKnown RBP11.67□□□□□ -0.54
SCLT1-204ENST00000503215 PSMB3P49720 205 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 ACOT7LQ6ZUV0 252 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 ZNF709Q8N972 641 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 OR2T35Q8NGX2 323 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 SLC35B3Q9H1N7 401 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 TRAV6A0A075B6T7 132 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 ZNF98A6NK75 572 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 C11orf94C9JXX5 98 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 L7N2F9 121 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 ORM2P19652 201 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 CXCL3P19876 107 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 ID1P41134 155 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 UBE2MP61081 183 aaKnown RBP11.67□□□□□ -0.54
SCLT1-204ENST00000503215 NUTF2P61970 127 aaKnown RBP11.67□□□□□ -0.54
SCLT1-204ENST00000503215 IGFL4Q6B9Z1 124 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 ZNF705AQ6ZN79 300 aaPredicted RBP11.67□□□□□ -0.54
SCLT1-204ENST00000503215 FOXI2Q6ZQN5 318 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 LINC00518Q8N0U6 118 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 OR4B1Q8NGF8 309 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 RSG1Q9BU20 258 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 C1QTNF4Q9BXJ3 329 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 SLC25A22Q9H936 323 aa11.67□□□□□ -0.54
SCLT1-204ENST00000503215 STRAPQ9Y3F4 350 aaKnown RBP11.67□□□□□ -0.54
SCLT1-204ENST00000503215 IGHV3OR16-12A0A075B7B8 117 aa11.66□□□□□ -0.54
SCLT1-204ENST00000503215 TRAV10A0A0B4J240 114 aa11.66□□□□□ -0.54
SCLT1-204ENST00000503215 PMS2P5A8MQ11 134 aa11.66□□□□□ -0.54
SCLT1-204ENST00000503215 ZNF705FA8MVS1 300 aaPredicted RBP11.66□□□□□ -0.54
SCLT1-204ENST00000503215 SCO1O75880 301 aa11.66□□□□□ -0.54
SCLT1-204ENST00000503215 OR4E1P0C645 316 aa11.66□□□□□ -0.54
SCLT1-204ENST00000503215 ZNF705DP0CH99 300 aaPredicted RBP11.66□□□□□ -0.54
SCLT1-204ENST00000503215 ZNF705BP0CI00 300 aaPredicted RBP11.66□□□□□ -0.54
SCLT1-204ENST00000503215 EMP1P54849 157 aa11.66□□□□□ -0.54
SCLT1-204ENST00000503215 PAX9P55771 341 aa11.66□□□□□ -0.54
SCLT1-204ENST00000503215 RPP30P78346 268 aaKnown RBP11.66□□□□□ -0.54
SCLT1-204ENST00000503215 AKR1C1Q04828 323 aa11.66□□□□□ -0.54
SCLT1-204ENST00000503215 FAM78BQ5VT40 261 aa11.66□□□□□ -0.54
SCLT1-204ENST00000503215 OR4D5Q8NGN0 318 aa11.66□□□□□ -0.54
SCLT1-204ENST00000503215 COQ8AQ8NI60 647 aa11.66□□□□□ -0.54
SCLT1-204ENST00000503215 C20orf85Q9H1P6 137 aa11.66□□□□□ -0.54
SCLT1-204ENST00000503215 PLA2G2EQ9NZK7 142 aa11.66□□□□□ -0.54
SCLT1-204ENST00000503215 DOK5Q9P104 306 aa11.66□□□□□ -0.54
SCLT1-204ENST00000503215 IGHV4-4A0A075B6R2 117 aa11.65□□□□□ -0.55
SCLT1-204ENST00000503215 ISLRO14498 428 aa11.65□□□□□ -0.55
SCLT1-204ENST00000503215 H2AFB1P0C5Y9 115 aa11.65□□□□□ -0.55
SCLT1-204ENST00000503215 S100A11P31949 105 aa11.65□□□□□ -0.55
SCLT1-204ENST00000503215 OR1B1Q8NGR6 318 aa11.65□□□□□ -0.55
SCLT1-204ENST00000503215 PSENENQ9NZ42 101 aa11.65□□□□□ -0.55
SCLT1-204ENST00000503215 DEFB131BA0A096LNP1 70 aa11.64□□□□□ -0.55
SCLT1-204ENST00000503215 A0A0J9YX75 114 aa11.64□□□□□ -0.55
SCLT1-204ENST00000503215 G3V3Q6 166 aa11.64□□□□□ -0.55
SCLT1-204ENST00000503215 SSSCA1O60232 199 aa11.64□□□□□ -0.55
SCLT1-204ENST00000503215 NMBP08949 121 aa11.64□□□□□ -0.55
SCLT1-204ENST00000503215 TCTAP57738 103 aa11.64□□□□□ -0.55
SCLT1-204ENST00000503215 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.64□□□□□ -0.55
SCLT1-204ENST00000503215 TMEM144Q7Z5S9 345 aa11.64□□□□□ -0.55
SCLT1-204ENST00000503215 C1orf158Q8N1D5 194 aa11.64□□□□□ -0.55
SCLT1-204ENST00000503215 CLRN3Q8NCR9 226 aa11.64□□□□□ -0.55
SCLT1-204ENST00000503215 BPIFCQ8NFQ6 507 aa11.64□□□□□ -0.55
SCLT1-204ENST00000503215 C16orf92Q96LL3 132 aa11.64□□□□□ -0.55
SCLT1-204ENST00000503215 TRAV8-2A0A0B4J237 113 aa11.63□□□□□ -0.55
SCLT1-204ENST00000503215 SMCO3A2RU48 225 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms