RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 MMP23AO75900 390 aa5.96□□□□□ -1.46
PDGFC-203ENST00000502773 COL8A2P25067 703 aa5.96□□□□□ -1.46
PDGFC-203ENST00000502773 LYZP61626 148 aa5.96□□□□□ -1.46
PDGFC-203ENST00000502773 RIGQ13278 110 aa5.96□□□□□ -1.46
PDGFC-203ENST00000502773 CD300EQ496F6 205 aaPredicted RBP5.96□□□□□ -1.46
PDGFC-203ENST00000502773 OR5A1Q8NGJ0 315 aa5.96□□□□□ -1.46
PDGFC-203ENST00000502773 MRPL16Q9NX20 251 aaKnown RBP5.96□□□□□ -1.46
PDGFC-203ENST00000502773 ZNF492Q9P255 531 aa5.96□□□□□ -1.46
PDGFC-203ENST00000502773 PGPA6NDG6 321 aa5.95□□□□□ -1.46
PDGFC-203ENST00000502773 IGLV2-23P01705 113 aa5.95□□□□□ -1.46
PDGFC-203ENST00000502773 IGLC2P0DOY2 106 aa5.95□□□□□ -1.46
PDGFC-203ENST00000502773 IGLC3P0DOY3 106 aa5.95□□□□□ -1.46
PDGFC-203ENST00000502773 ARPC1AQ92747 370 aa5.95□□□□□ -1.46
PDGFC-203ENST00000502773 A0A1W2PPI3 338 aa5.95□□□□□ -1.46
PDGFC-203ENST00000502773 NCBP2LA6PVI3 153 aaKnown RBP5.95□□□□□ -1.46
PDGFC-203ENST00000502773 TOMM40O96008 361 aa5.95□□□□□ -1.46
PDGFC-203ENST00000502773 GPR183P32249 361 aa5.95□□□□□ -1.46
PDGFC-203ENST00000502773 GAGE2BQ13066 116 aa5.95□□□□□ -1.46
PDGFC-203ENST00000502773 C5orf64Q2M2E5 130 aa5.95□□□□□ -1.46
PDGFC-203ENST00000502773 GAGE2EQ4V326 116 aa5.95□□□□□ -1.46
PDGFC-203ENST00000502773 GAGE2DQ9UEU5 116 aa5.95□□□□□ -1.46
PDGFC-203ENST00000502773 TRAV9-2A0A087WT02 112 aa5.95□□□□□ -1.46
PDGFC-203ENST00000502773 A0A087X0K7 114 aa5.95□□□□□ -1.46
PDGFC-203ENST00000502773 UBE2E1P51965 193 aa5.95□□□□□ -1.46
PDGFC-203ENST00000502773 LINC00205P59089 165 aa5.95□□□□□ -1.46
PDGFC-203ENST00000502773 CX3CL1P78423 397 aa5.95□□□□□ -1.46
PDGFC-203ENST00000502773 TMEM136Q6ZRR5 245 aa5.95□□□□□ -1.46
PDGFC-203ENST00000502773 A0A0G2JLM5 398 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 NDUFB8O95169 186 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 APCSP02743 223 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 ADMP35318 185 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 WT1-ASQ06250 92 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 Q0VG73 95 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 GCSAMLQ5JQS6 135 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 C10orf126Q8N4M7 172 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 FBXL15Q9H469 300 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 DYSFO75923 2080 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 IGLC7A0M8Q6 106 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 HIST1H1AQ02539 215 aaPredicted RBP5.94□□□□□ -1.46
PDGFC-203ENST00000502773 PRR31Q5SQ13 230 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 HCP5Q6MZN7 132 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 FAM53AQ6NSI3 398 aaPredicted RBP5.94□□□□□ -1.46
PDGFC-203ENST00000502773 ZNF418Q8TF45 676 aaPredicted RBP5.94□□□□□ -1.46
PDGFC-203ENST00000502773 SSBP4Q9BWG4 385 aaPredicted RBP5.94□□□□□ -1.46
PDGFC-203ENST00000502773 ST20Q9HBF5 79 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 TIMM23O14925 209 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 NDUFA3O95167 84 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 CRYGBP07316 175 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 ETDBQ3ZM63 59 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 DUX4L9Q6RFH8 374 aaPredicted RBP5.94□□□□□ -1.46
PDGFC-203ENST00000502773 ADAMTSL5Q6ZMM2 481 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 PMCHL2Q9BQD1 86 aa5.94□□□□□ -1.46
PDGFC-203ENST00000502773 TMSB15BA0A087X1C1 80 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 TMEM189A5PLL7 270 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 LEPROTL1O95214 131 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 SMIM13P0DJ93 91 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 GATA3P23771 443 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 ATP5J2P56134 94 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 PSMG4Q5JS54 123 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 WIPF2Q8TF74 440 aaPredicted RBP5.93□□□□□ -1.46
PDGFC-203ENST00000502773 TSKUQ8WUA8 353 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 SGK494Q96LW2 274 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 C21orf62Q9NYP8 219 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 RABAC1Q9UI14 185 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 MRPS16Q9Y3D3 137 aaKnown RBP5.93□□□□□ -1.46
PDGFC-203ENST00000502773 APOMO95445 188 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 SCGB1A1P11684 91 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 TTC9CQ8N5M4 171 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 Q8N7P7 452 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 OR13C6PQ8NH95 151 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 C1orf43Q9BWL3 253 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 REG1AP05451 166 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 VMO1Q7Z5L0 202 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 OR8A1Q8NGG7 326 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 EEF1AKMT3Q96AZ1 226 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 SLC25A2Q9BXI2 301 aa5.93□□□□□ -1.46
PDGFC-203ENST00000502773 IGHV3-72A0A0B4J1Y9 119 aa5.92□□□□□ -1.46
PDGFC-203ENST00000502773 TEX48A0A1B0GUV7 120 aa5.92□□□□□ -1.46
PDGFC-203ENST00000502773 C1QTNF9P0C862 333 aa5.92□□□□□ -1.46
PDGFC-203ENST00000502773 COL8A1P27658 744 aa5.92□□□□□ -1.46
PDGFC-203ENST00000502773 RPL13AP40429 203 aaKnown RBP5.92□□□□□ -1.46
PDGFC-203ENST00000502773 ADORA2A-AS1P86434 159 aa5.92□□□□□ -1.46
PDGFC-203ENST00000502773 PRR30Q53SZ7 412 aaPredicted RBP5.92□□□□□ -1.46
PDGFC-203ENST00000502773 ZNF329Q86UD4 541 aa5.92□□□□□ -1.46
PDGFC-203ENST00000502773 CIARTQ8N365 385 aaPredicted RBP5.92□□□□□ -1.46
PDGFC-203ENST00000502773 TMEM70Q9BUB7 260 aa5.92□□□□□ -1.46
PDGFC-203ENST00000502773 MRPL27Q9P0M9 148 aaKnown RBP5.92□□□□□ -1.46
PDGFC-203ENST00000502773 EP300Q09472 2414 aaPredicted RBP5.92□□□□□ -1.46
PDGFC-203ENST00000502773 LY6LH3BQJ8 138 aa5.92□□□□□ -1.46
PDGFC-203ENST00000502773 FCGR2BP31994 310 aaPredicted RBP5.92□□□□□ -1.46
PDGFC-203ENST00000502773 SFTA2Q6UW10 78 aa5.92□□□□□ -1.46
PDGFC-203ENST00000502773 PIP4P2Q8N4L2 257 aa5.92□□□□□ -1.46
PDGFC-203ENST00000502773 RNF125Q96EQ8 232 aa5.92□□□□□ -1.46
PDGFC-203ENST00000502773 SHANK2-AS3Q9BTD1 123 aa5.92□□□□□ -1.46
PDGFC-203ENST00000502773 RPP21Q9H633 154 aaKnown RBP5.92□□□□□ -1.46
PDGFC-203ENST00000502773 ZNF256Q9Y2P7 627 aaPredicted RBP5.92□□□□□ -1.46
PDGFC-203ENST00000502773 KLF12Q9Y4X4 402 aa5.92□□□□□ -1.46
PDGFC-203ENST00000502773 TRBV20-1A0A075B6N2 111 aa5.92□□□□□ -1.46
PDGFC-203ENST00000502773 GAGE12JA6NER3 117 aa5.92□□□□□ -1.46
PDGFC-203ENST00000502773 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms