RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 C17orf98A8MV24 154 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 FNDC10F2Z333 226 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 H3BP45 60 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 K7EM74 188 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 M0R036 132 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 TGOLN2O43493 480 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 SCO1O75880 301 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 S1PR2O95136 353 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 MT-CO2P00403 227 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 IFNA10P01566 189 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 GYPAP02724 150 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 CGB3P0DN86 165 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 CGB7P0DN87 165 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 RAB13P51153 203 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 PRRX1P54821 245 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 RPL30P62888 115 aaKnown RBP3.83□□□□□ -1.8
NEDD4-203ENST00000502612 RPL31P62899 125 aaKnown RBP3.83□□□□□ -1.8
NEDD4-203ENST00000502612 FLI1Q01543 452 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-203ENST00000502612 TMEM267Q0VDI3 215 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-203ENST00000502612 LTC4SQ16873 150 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 ACOT6Q3I5F7 207 aaPredicted RBP3.83□□□□□ -1.8
NEDD4-203ENST00000502612 TEX43Q6ZNM6 134 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 RPRMLQ8N4K4 120 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 CYB561D1Q8N8Q1 229 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 OR4A5Q8NH83 315 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 UBALD1Q8TB05 177 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 SFT2D1Q8WV19 159 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 MBD3L1Q8WWY6 194 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 ZNF714Q96N38 554 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 GAFA1Q96PS6 74 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 TXNDC17Q9BRA2 123 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 C20orf24Q9BUV8 137 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 SH3BGRL3Q9H299 93 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 MANBALQ9NQG1 85 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 TMEM106BQ9NUM4 274 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 KAAG1Q9UBP8 84 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 VAX2Q9UIW0 290 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 RPUSD1Q9UJJ7 312 aaKnown RBP3.83□□□□□ -1.8
NEDD4-203ENST00000502612 ZNF257Q9Y2Q1 563 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 DOCK10Q96BY6 2186 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 NCOR1O75376 2440 aa3.83□□□□□ -1.8
NEDD4-203ENST00000502612 PRUNE2Q8WUY3 3088 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 ARID1AO14497 2285 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 ALPK2Q86TB3 2170 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 IGHV1-69-2A0A0G2JMI3 117 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 CTXND1A0A1B0GTU2 59 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 UBE2L5PA0A1B0GUS4 154 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 A0A1W2PPV4 95 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 DEFB108AA8MXU0 73 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 DNASE2O00115 360 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-203ENST00000502612 CYB5R3P00387 301 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-203ENST00000502612 RBP4P02753 201 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 MT-ND4LP03901 98 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 IFNA4P05014 189 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 NFYBP25208 207 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 PSMB3P49720 205 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 RAB5BP61020 215 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 HERVK_113P61574 105 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 HSPE1P61604 102 aaKnown RBP3.82□□□□□ -1.8
NEDD4-203ENST00000502612 CCL8P80075 99 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 AKR1C1Q04828 323 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 HEPN1Q6WQI6 88 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 SLC35E3Q7Z769 313 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 PDPNQ86YL7 162 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 LINC00311Q8N616 119 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 DEFB108BQ8NET1 73 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 OR10X1Q8NGY0 326 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 OR10J6PQ8NGY7 276 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 CA5BP1Q8WTZ4 195 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 CCL17Q92583 94 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 TVP23CQ96ET8 276 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 BTF3L4Q96K17 158 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 OR4C12Q96R67 309 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 CCL13Q99616 98 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 PARP12Q9H0J9 701 aaKnown RBP3.82□□□□□ -1.8
NEDD4-203ENST00000502612 RAB1BQ9H0U4 201 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 PATZ1Q9HBE1 687 aaKnown RBP3.82□□□□□ -1.8
NEDD4-203ENST00000502612 NPVFQ9HCQ7 196 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 SIRT7Q9NRC8 400 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 PRO0461Q9UI25 63 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 AMMECR1Q9Y4X0 333 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-203ENST00000502612 NCOA6Q14686 2063 aaPredicted RBP3.82□□□□□ -1.8
NEDD4-203ENST00000502612 PTPRBP23467 1997 aa3.82□□□□□ -1.8
NEDD4-203ENST00000502612 EYSQ5T1H1 3165 aa3.81□□□□□ -1.8
NEDD4-203ENST00000502612 TTC28Q96AY4 2481 aa3.81□□□□□ -1.8
NEDD4-203ENST00000502612 A0A087WWC5 75 aa3.81□□□□□ -1.8
NEDD4-203ENST00000502612 IGHV3-66A0A0C4DH42 116 aa3.81□□□□□ -1.8
NEDD4-203ENST00000502612 A0A1B0GVX0 72 aa3.81□□□□□ -1.8
NEDD4-203ENST00000502612 MAP1LC3B2A6NCE7 125 aa3.81□□□□□ -1.8
NEDD4-203ENST00000502612 C1orf196B1AJZ1 125 aa3.81□□□□□ -1.8
NEDD4-203ENST00000502612 TMEM250H0YL14 139 aa3.81□□□□□ -1.8
NEDD4-203ENST00000502612 PDE6DO43924 150 aa3.81□□□□□ -1.8
NEDD4-203ENST00000502612 PRB2P02812 416 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-203ENST00000502612 SAA2P0DJI9 122 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-203ENST00000502612 BCL2P10415 239 aa3.81□□□□□ -1.8
NEDD4-203ENST00000502612 ADCYAP1P18509 176 aa3.81□□□□□ -1.8
NEDD4-203ENST00000502612 FGF7P21781 194 aa3.81□□□□□ -1.8
NEDD4-203ENST00000502612 USF1P22415 310 aaPredicted RBP3.81□□□□□ -1.8
NEDD4-203ENST00000502612 NPY1RP25929 384 aa3.81□□□□□ -1.8
NEDD4-203ENST00000502612 GPX4P36969 197 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms