RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 BAMBIQ13145 260 aa3.05□□□□□ -1.92
HMGB1P21-201ENST00000502313 C12orf74Q32Q52 190 aa3.05□□□□□ -1.92
HMGB1P21-201ENST00000502313 SPINK14Q6IE38 97 aa3.05□□□□□ -1.92
HMGB1P21-201ENST00000502313 TOMM20LQ6UXN7 152 aa3.05□□□□□ -1.92
HMGB1P21-201ENST00000502313 LRRC28Q86X40 367 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P21-201ENST00000502313 PDPNQ86YL7 162 aa3.05□□□□□ -1.92
HMGB1P21-201ENST00000502313 KLHL30-AS1Q8NEE0 82 aa3.05□□□□□ -1.92
HMGB1P21-201ENST00000502313 FDCSPQ8NFU4 85 aa3.05□□□□□ -1.92
HMGB1P21-201ENST00000502313 OR8D4Q8NGM9 314 aa3.05□□□□□ -1.92
HMGB1P21-201ENST00000502313 OR10G4Q8NGN3 311 aa3.05□□□□□ -1.92
HMGB1P21-201ENST00000502313 OR51H1Q8NH63 302 aa3.05□□□□□ -1.92
HMGB1P21-201ENST00000502313 TMEM101Q96IK0 257 aa3.05□□□□□ -1.92
HMGB1P21-201ENST00000502313 TSPAN32Q96QS1 320 aa3.05□□□□□ -1.92
HMGB1P21-201ENST00000502313 PBDC1Q9BVG4 233 aa3.05□□□□□ -1.92
HMGB1P21-201ENST00000502313 MED28Q9H204 178 aa3.05□□□□□ -1.92
HMGB1P21-201ENST00000502313 COMMD3Q9UBI1 195 aa3.05□□□□□ -1.92
HMGB1P21-201ENST00000502313 LSM2Q9Y333 95 aaKnown RBP3.05□□□□□ -1.92
HMGB1P21-201ENST00000502313 NUP210LQ5VU65 1888 aa3.05□□□□□ -1.92
HMGB1P21-201ENST00000502313 ANKRD17O75179 2603 aaKnown RBP3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 SETD2Q9BYW2 2564 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 IGKV1D-42A0A075B6H8 117 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 TRGV5A0A0B4J1U4 118 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 IGKV1-6A0A0C4DH72 117 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 KRTAP29-1A8MX34 341 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 INS-IGF2F8WCM5 200 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 H7C423 109 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 SLC17A3O00476 420 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 CRYZL1O95825 349 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 CSN2P05814 226 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 INAFM2P0DMQ5 153 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 CRISP2P16562 243 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 GABRR1P24046 479 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 CDK2P24941 298 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 KRTAP10-11P60412 298 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 NCS1P62166 190 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 CDK5R1Q15078 307 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 RHEBQ15382 184 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 DEFB109BQ30KR1 87 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 BCL2L15Q5TBC7 163 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 GFI1BQ5VTD9 330 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 EBLN2Q6P2I7 272 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 UNQ9165/PRO28630Q6UXU0 137 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 ZNF433Q8N7K0 673 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 ZFP62Q8NB50 900 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 OR1L1Q8NH94 360 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 PP6455Q8WZ26 134 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 TMEM158Q8WZ71 300 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 HDHD3Q9BSH5 251 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 PAXXQ9BUH6 204 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 LINC00470Q9BZP3 86 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 SH3BGRL3Q9H299 93 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 NUFIP1Q9UHK0 495 aaKnown RBP3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 NOP16Q9Y3C1 178 aaKnown RBP3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 CSAG2Q9Y5P2 127 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 R4GMQ9 66 aa3.04□□□□□ -1.92
HMGB1P21-201ENST00000502313 CPAMD8Q8IZJ3 1885 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 PCNX1Q96RV3 2341 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 A0A1W2PPR1 153 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 IFITM5A6NNB3 132 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 RPL36A-HNRNPH2H7BZ11 118 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 H7C1C5 153 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 AIPO00170 330 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 ZNF354AO60765 605 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 DEDDO75618 318 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 UBL3O95164 117 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 GYPBP06028 91 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 CCL3P10147 92 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 FXYD6P3P58550 94 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 LCN6P62502 163 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 FABP9Q0Z7S8 132 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 FOXF1Q12946 379 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 HNRNPA0Q13151 305 aaKnown RBP3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 FCN2Q15485 313 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 C10orf128Q5T292 105 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 ZC2HC1BQ5TFG8 222 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 IL34Q6ZMJ4 242 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 C16orf47Q6ZP98 133 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 TCF24Q7RTU0 167 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 BAP18Q8IXM2 172 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 EXOC3-AS1Q8N2X6 119 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 SLC22A24Q8N4F4 322 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 TOMM5Q8N4H5 51 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 ZNF525Q8N782 197 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 ZNF283Q8N7M2 679 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 TMEM106AQ96A25 262 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 GALMQ96C23 342 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 GPR146Q96CH1 333 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 MUCL1Q96DR8 90 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 SLAMF6Q96DU3 332 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 MRPS24Q96EL2 167 aaKnown RBP3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 OR2M2Q96R28 347 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 SOSTQ9BQB4 213 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 CST11Q9H112 138 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 SCP2D1Q9UJQ7 156 aa3.03□□□□□ -1.92
HMGB1P21-201ENST00000502313 ESPL1Q14674 2120 aa3.02□□□□□ -1.93
HMGB1P21-201ENST00000502313 ZANQ9Y493 2812 aa3.02□□□□□ -1.93
HMGB1P21-201ENST00000502313 IGKV3D-15A0A087WSY6 115 aa3.02□□□□□ -1.93
HMGB1P21-201ENST00000502313 A0A0J9YW62 118 aa3.02□□□□□ -1.93
HMGB1P21-201ENST00000502313 KRTAP16-1A8MUX0 517 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms