RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 LCE3BQ5TA77 95 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 TMEM268Q5VZI3 342 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 Q6ZSN1 163 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 TMEM144Q7Z5S9 345 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 NOXA1Q86UR1 476 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 LHFPL1Q86WI0 220 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 CROCCP3Q8IVE0 287 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 FAM219AQ8IW50 185 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 OR4D10Q8NGI6 311 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 RBPMSQ93062 196 aaKnown RBP6.27□□□□□ -1.41
CCDC171-209ENST00000498725 C16orf74Q96GX8 76 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 KRTAP4-12Q9BQ66 201 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 UPK3BQ9BT76 320 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 TMEM222Q9H0R3 208 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 VCX3BQ9H321 246 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 RBKSQ9H477 322 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 PRR13Q9NZ81 148 aa6.27□□□□□ -1.41
CCDC171-209ENST00000498725 PAIP2BQ9ULR5 123 aaKnown RBP6.27□□□□□ -1.41
CCDC171-209ENST00000498725 MYCBP2O75592 4640 aa6.26□□□□□ -1.41
CCDC171-209ENST00000498725 HPGDSO60760 199 aa6.26□□□□□ -1.41
CCDC171-209ENST00000498725 FABP1P07148 127 aa6.26□□□□□ -1.41
CCDC171-209ENST00000498725 TAS2R60P59551 318 aa6.26□□□□□ -1.41
CCDC171-209ENST00000498725 LGI3Q8N145 548 aa6.26□□□□□ -1.41
CCDC171-209ENST00000498725 OR10J6PQ8NGY7 276 aa6.26□□□□□ -1.41
CCDC171-209ENST00000498725 DTD1Q8TEA8 209 aa6.26□□□□□ -1.41
CCDC171-209ENST00000498725 GLYATL2Q8WU03 294 aa6.26□□□□□ -1.41
CCDC171-209ENST00000498725 RAB26Q9ULW5 256 aa6.26□□□□□ -1.41
CCDC171-209ENST00000498725 C14orf166Q9Y224 244 aaKnown RBP6.26□□□□□ -1.41
CCDC171-209ENST00000498725 TRAV8-2A0A0B4J237 113 aa6.25□□□□□ -1.41
CCDC171-209ENST00000498725 ZNF98A6NK75 572 aa6.25□□□□□ -1.41
CCDC171-209ENST00000498725 FAM25AB3EWG3 89 aa6.25□□□□□ -1.41
CCDC171-209ENST00000498725 FAM25CB3EWG5 89 aa6.25□□□□□ -1.41
CCDC171-209ENST00000498725 FAM25GB3EWG6 89 aa6.25□□□□□ -1.41
CCDC171-209ENST00000498725 SIVA1O15304 175 aa6.25□□□□□ -1.41
CCDC171-209ENST00000498725 CDS2O95674 445 aa6.25□□□□□ -1.41
CCDC171-209ENST00000498725 SULT1A3P0DMM9 295 aa6.25□□□□□ -1.41
CCDC171-209ENST00000498725 SULT1A4P0DMN0 295 aa6.25□□□□□ -1.41
CCDC171-209ENST00000498725 ORM2P19652 201 aa6.25□□□□□ -1.41
CCDC171-209ENST00000498725 GATA2P23769 480 aaPredicted RBP6.25□□□□□ -1.41
CCDC171-209ENST00000498725 AARDQ4LEZ3 155 aa6.25□□□□□ -1.41
CCDC171-209ENST00000498725 SAMD13Q5VXD3 122 aa6.25□□□□□ -1.41
CCDC171-209ENST00000498725 CDPF1Q6NVV7 123 aa6.25□□□□□ -1.41
CCDC171-209ENST00000498725 FAAP20Q6NZ36 180 aa6.25□□□□□ -1.41
CCDC171-209ENST00000498725 TMEM256Q8N2U0 113 aa6.25□□□□□ -1.41
CCDC171-209ENST00000498725 OR52I2Q8NH67 350 aa6.25□□□□□ -1.41
CCDC171-209ENST00000498725 TERB2Q8NHR7 220 aa6.25□□□□□ -1.41
CCDC171-209ENST00000498725 PARD6GQ9BYG4 376 aaPredicted RBP6.25□□□□□ -1.41
CCDC171-209ENST00000498725 NAA60Q9H7X0 242 aa6.25□□□□□ -1.41
CCDC171-209ENST00000498725 J3KRW8 73 aa6.24□□□□□ -1.41
CCDC171-209ENST00000498725 TMEM127O75204 238 aa6.24□□□□□ -1.41
CCDC171-209ENST00000498725 ADAP1O75689 374 aa6.24□□□□□ -1.41
CCDC171-209ENST00000498725 APOA1P02647 267 aa6.24□□□□□ -1.41
CCDC171-209ENST00000498725 RLN2P04090 185 aa6.24□□□□□ -1.41
CCDC171-209ENST00000498725 GCSHP23434 173 aa6.24□□□□□ -1.41
CCDC171-209ENST00000498725 KIR3DS1Q14943 382 aa6.24□□□□□ -1.41
CCDC171-209ENST00000498725 OR1B1Q8NGR6 318 aa6.24□□□□□ -1.41
CCDC171-209ENST00000498725 RNASE8Q8TDE3 154 aaKnown RBP6.24□□□□□ -1.41
CCDC171-209ENST00000498725 TMEM263Q8WUH6 116 aaKnown RBP6.24□□□□□ -1.41
CCDC171-209ENST00000498725 TMPRSS5Q9H3S3 457 aa6.24□□□□□ -1.41
CCDC171-209ENST00000498725 U3KQ87 197 aa6.24□□□□□ -1.41
CCDC171-209ENST00000498725 FAT1Q14517 4588 aa6.24□□□□□ -1.41
CCDC171-209ENST00000498725 IGKV1OR2-108A0A075B7D4 117 aa6.23□□□□□ -1.41
CCDC171-209ENST00000498725 A0A087WTM6 91 aa6.23□□□□□ -1.41
CCDC171-209ENST00000498725 A0A096LPF7 62 aa6.23□□□□□ -1.41
CCDC171-209ENST00000498725 SNURFLB1AK76 121 aa6.23□□□□□ -1.41
CCDC171-209ENST00000498725 B3GALNT1O75752 331 aa6.23□□□□□ -1.41
CCDC171-209ENST00000498725 NXPH4O95158 308 aa6.23□□□□□ -1.41
CCDC171-209ENST00000498725 RAB3DO95716 219 aa6.23□□□□□ -1.41
CCDC171-209ENST00000498725 IAPPP10997 89 aa6.23□□□□□ -1.41
CCDC171-209ENST00000498725 GPX4P36969 197 aaPredicted RBP6.23□□□□□ -1.41
CCDC171-209ENST00000498725 ZNF493Q6ZR52 646 aa6.23□□□□□ -1.41
CCDC171-209ENST00000498725 TMED4Q7Z7H5 227 aa6.23□□□□□ -1.41
CCDC171-209ENST00000498725 CCDC28AQ8IWP9 274 aa6.23□□□□□ -1.41
CCDC171-209ENST00000498725 OR8A1Q8NGG7 326 aa6.23□□□□□ -1.41
CCDC171-209ENST00000498725 LRRC20Q8TCA0 184 aa6.23□□□□□ -1.41
CCDC171-209ENST00000498725 ZNF503Q96F45 646 aa6.23□□□□□ -1.41
CCDC171-209ENST00000498725 TRGV9Q99603 122 aa6.23□□□□□ -1.41
CCDC171-209ENST00000498725 RTBDNQ9BSG5 229 aaPredicted RBP6.23□□□□□ -1.41
CCDC171-209ENST00000498725 TMEM147Q9BVK8 224 aa6.23□□□□□ -1.41
CCDC171-209ENST00000498725 SNRPCP09234 159 aaKnown RBP6.22□□□□□ -1.41
CCDC171-209ENST00000498725 GPR107Q5VW38 600 aa6.22□□□□□ -1.41
CCDC171-209ENST00000498725 GGNBP1Q5YKI7 109 aa6.22□□□□□ -1.41
CCDC171-209ENST00000498725 TMEM182Q6ZP80 229 aaPredicted RBP6.22□□□□□ -1.41
CCDC171-209ENST00000498725 Q6ZTI0 123 aa6.22□□□□□ -1.41
CCDC171-209ENST00000498725 CCDC190Q86UF4 302 aa6.22□□□□□ -1.41
CCDC171-209ENST00000498725 BPIFCQ8NFQ6 507 aa6.22□□□□□ -1.41
CCDC171-209ENST00000498725 OR1S1Q8NH92 325 aa6.22□□□□□ -1.41
CCDC171-209ENST00000498725 VSIG2Q96IQ7 327 aa6.22□□□□□ -1.41
CCDC171-209ENST00000498725 HSPB7Q9UBY9 170 aa6.22□□□□□ -1.41
CCDC171-209ENST00000498725 CRYM-AS1A6NIL9 109 aa6.21□□□□□ -1.42
CCDC171-209ENST00000498725 H7BYZ3 331 aa6.21□□□□□ -1.42
CCDC171-209ENST00000498725 CDKN1BP46527 198 aa6.21□□□□□ -1.42
CCDC171-209ENST00000498725 RAB11AP62491 216 aa6.21□□□□□ -1.42
CCDC171-209ENST00000498725 SMCO1Q147U7 214 aa6.21□□□□□ -1.42
CCDC171-209ENST00000498725 PSG3Q16557 428 aa6.21□□□□□ -1.42
CCDC171-209ENST00000498725 STEAP1BQ6NZ63 245 aa6.21□□□□□ -1.42
CCDC171-209ENST00000498725 LYZL2Q7Z4W2 148 aa6.21□□□□□ -1.42
CCDC171-209ENST00000498725 THAP8Q8NA92 274 aa6.21□□□□□ -1.42
CCDC171-209ENST00000498725 TMEM229BQ8NBD8 167 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms