RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 LYPD1Q8N2G4 141 aa9.65□□□□□ -0.86
CCDC58-207ENST00000498466 TMEM256Q8N2U0 113 aa9.65□□□□□ -0.86
CCDC58-207ENST00000498466 RNF182Q8N6D2 247 aa9.65□□□□□ -0.86
CCDC58-207ENST00000498466 FRZBQ92765 325 aa9.65□□□□□ -0.86
CCDC58-207ENST00000498466 C17orf77Q96MU5 243 aa9.65□□□□□ -0.86
CCDC58-207ENST00000498466 TRGV9Q99603 122 aa9.65□□□□□ -0.86
CCDC58-207ENST00000498466 UPK3BQ9BT76 320 aa9.65□□□□□ -0.86
CCDC58-207ENST00000498466 NOP10Q9NPE3 64 aaKnown RBP9.65□□□□□ -0.86
CCDC58-207ENST00000498466 PPP1R14DQ9NXH3 145 aa9.65□□□□□ -0.86
CCDC58-207ENST00000498466 HSPB7Q9UBY9 170 aa9.65□□□□□ -0.86
CCDC58-207ENST00000498466 A0A0J9YY99 117 aa9.64□□□□□ -0.87
CCDC58-207ENST00000498466 M6PRP20645 277 aa9.64□□□□□ -0.87
CCDC58-207ENST00000498466 CCR6P51684 374 aa9.64□□□□□ -0.87
CCDC58-207ENST00000498466 ATP5IP56385 69 aaPredicted RBP9.64□□□□□ -0.87
CCDC58-207ENST00000498466 RHOBP62745 196 aa9.64□□□□□ -0.87
CCDC58-207ENST00000498466 SMCO1Q147U7 214 aa9.64□□□□□ -0.87
CCDC58-207ENST00000498466 ESRGQ1W209 222 aa9.64□□□□□ -0.87
CCDC58-207ENST00000498466 TMEM144Q7Z5S9 345 aa9.64□□□□□ -0.87
CCDC58-207ENST00000498466 ZNF738Q8NE65 137 aa9.64□□□□□ -0.87
CCDC58-207ENST00000498466 OR1B1Q8NGR6 318 aa9.64□□□□□ -0.87
CCDC58-207ENST00000498466 OR10J6PQ8NGY7 276 aa9.64□□□□□ -0.87
CCDC58-207ENST00000498466 RXFP4Q8TDU9 374 aa9.64□□□□□ -0.87
CCDC58-207ENST00000498466 PGPEP1Q9NXJ5 209 aa9.64□□□□□ -0.87
CCDC58-207ENST00000498466 PRR13Q9NZ81 148 aa9.64□□□□□ -0.87
CCDC58-207ENST00000498466 EXTL2Q9UBQ6 330 aa9.64□□□□□ -0.87
CCDC58-207ENST00000498466 VPS13BQ7Z7G8 4022 aa9.64□□□□□ -0.87
CCDC58-207ENST00000498466 IGKV1OR2-108A0A075B7D4 117 aa9.63□□□□□ -0.87
CCDC58-207ENST00000498466 TRAV8-2A0A0B4J237 113 aa9.63□□□□□ -0.87
CCDC58-207ENST00000498466 CFDP00746 253 aaPredicted RBP9.63□□□□□ -0.87
CCDC58-207ENST00000498466 ORM2P19652 201 aa9.63□□□□□ -0.87
CCDC58-207ENST00000498466 FUSP35637 526 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCDC58-207ENST00000498466 LINC00315P59091 139 aa9.63□□□□□ -0.87
CCDC58-207ENST00000498466 VBP1P61758 197 aa9.63□□□□□ -0.87
CCDC58-207ENST00000498466 HIST1H1AQ02539 215 aaPredicted RBP9.63□□□□□ -0.87
CCDC58-207ENST00000498466 SURF2Q15527 256 aaPredicted RBP9.63□□□□□ -0.87
CCDC58-207ENST00000498466 GGNBP1Q5YKI7 109 aa9.63□□□□□ -0.87
CCDC58-207ENST00000498466 MZT2AQ6P582 158 aa9.63□□□□□ -0.87
CCDC58-207ENST00000498466 OR4D5Q8NGN0 318 aa9.63□□□□□ -0.87
CCDC58-207ENST00000498466 IL22RA2Q969J5 263 aa9.63□□□□□ -0.87
CCDC58-207ENST00000498466 ZNF503Q96F45 646 aa9.63□□□□□ -0.87
CCDC58-207ENST00000498466 GPR82Q96P67 336 aa9.63□□□□□ -0.87
CCDC58-207ENST00000498466 VCX3AQ9NNX9 186 aa9.63□□□□□ -0.87
CCDC58-207ENST00000498466 PAIP2BQ9ULR5 123 aaKnown RBP9.63□□□□□ -0.87
CCDC58-207ENST00000498466 SLC45A2Q9UMX9 530 aa9.63□□□□□ -0.87
CCDC58-207ENST00000498466 MRPS16Q9Y3D3 137 aaKnown RBP9.63□□□□□ -0.87
CCDC58-207ENST00000498466 DISC1C4P0D8 188 aa9.62□□□□□ -0.87
CCDC58-207ENST00000498466 ZNF701M0R085 212 aaPredicted RBP9.62□□□□□ -0.87
CCDC58-207ENST00000498466 EREGO14944 169 aa9.62□□□□□ -0.87
CCDC58-207ENST00000498466 ADAP1O75689 374 aa9.62□□□□□ -0.87
CCDC58-207ENST00000498466 XGP55808 180 aa9.62□□□□□ -0.87
CCDC58-207ENST00000498466 RAB11AP62491 216 aa9.62□□□□□ -0.87
CCDC58-207ENST00000498466 ZNF493Q6ZR52 646 aa9.62□□□□□ -0.87
CCDC58-207ENST00000498466 THAP8Q8NA92 274 aa9.62□□□□□ -0.87
CCDC58-207ENST00000498466 TMEM147Q9BVK8 224 aa9.62□□□□□ -0.87
CCDC58-207ENST00000498466 GPR132Q9UNW8 380 aa9.62□□□□□ -0.87
CCDC58-207ENST00000498466 KCNIP3Q9Y2W7 256 aa9.62□□□□□ -0.87
CCDC58-207ENST00000498466 S100A7P31151 101 aa9.61□□□□□ -0.87
CCDC58-207ENST00000498466 LYZL2Q7Z4W2 148 aa9.61□□□□□ -0.87
CCDC58-207ENST00000498466 BPIFCQ8NFQ6 507 aa9.61□□□□□ -0.87
CCDC58-207ENST00000498466 OR1S1Q8NH92 325 aa9.61□□□□□ -0.87
CCDC58-207ENST00000498466 RNASE8Q8TDE3 154 aaKnown RBP9.61□□□□□ -0.87
CCDC58-207ENST00000498466 TMEM263Q8WUH6 116 aaKnown RBP9.61□□□□□ -0.87
CCDC58-207ENST00000498466 C15orf40Q8WUR7 153 aa9.61□□□□□ -0.87
CCDC58-207ENST00000498466 A0A0B4J2A0 478 aa9.6□□□□□ -0.87
CCDC58-207ENST00000498466 ATP6V1G2O95670 118 aa9.6□□□□□ -0.87
CCDC58-207ENST00000498466 IAPPP10997 89 aa9.6□□□□□ -0.87
CCDC58-207ENST00000498466 HOXA5P20719 270 aa9.6□□□□□ -0.87
CCDC58-207ENST00000498466 GATA2P23769 480 aaPredicted RBP9.6□□□□□ -0.87
CCDC58-207ENST00000498466 Q6ZRN7 208 aaPredicted RBP9.6□□□□□ -0.87
CCDC58-207ENST00000498466 OR8A1Q8NGG7 326 aa9.6□□□□□ -0.87
CCDC58-207ENST00000498466 AP3S1Q92572 193 aa9.6□□□□□ -0.87
CCDC58-207ENST00000498466 SHPKQ9UHJ6 478 aa9.6□□□□□ -0.87
CCDC58-207ENST00000498466 GAGE12BA1L429 117 aa9.59□□□□□ -0.87
CCDC58-207ENST00000498466 H7BYZ3 331 aa9.59□□□□□ -0.87
CCDC58-207ENST00000498466 GAGE7O76087 117 aa9.59□□□□□ -0.87
CCDC58-207ENST00000498466 GAGE12FP0CL80 117 aa9.59□□□□□ -0.87
CCDC58-207ENST00000498466 GAGE12GP0CL81 117 aa9.59□□□□□ -0.87
CCDC58-207ENST00000498466 GAGE12IP0CL82 117 aa9.59□□□□□ -0.87
CCDC58-207ENST00000498466 PRB4P10163 310 aaPredicted RBP9.59□□□□□ -0.87
CCDC58-207ENST00000498466 AKR1C4P17516 323 aa9.59□□□□□ -0.87
CCDC58-207ENST00000498466 CDKN1BP46527 198 aa9.59□□□□□ -0.87
CCDC58-207ENST00000498466 ERVFC1-1P60608 527 aa9.59□□□□□ -0.87
CCDC58-207ENST00000498466 CDPF1Q6NVV7 123 aa9.59□□□□□ -0.87
CCDC58-207ENST00000498466 FUNDC2Q9BWH2 189 aa9.59□□□□□ -0.87
CCDC58-207ENST00000498466 H3BNG1 76 aa9.58□□□□□ -0.88
CCDC58-207ENST00000498466 IFNA5P01569 189 aa9.58□□□□□ -0.88
CCDC58-207ENST00000498466 RLN2P04090 185 aa9.58□□□□□ -0.88
CCDC58-207ENST00000498466 SSBP1Q04837 148 aaKnown RBP9.58□□□□□ -0.88
CCDC58-207ENST00000498466 TMEM182Q6ZP80 229 aaPredicted RBP9.58□□□□□ -0.88
CCDC58-207ENST00000498466 CCDC28AQ8IWP9 274 aa9.58□□□□□ -0.88
CCDC58-207ENST00000498466 LRRC20Q8TCA0 184 aa9.58□□□□□ -0.88
CCDC58-207ENST00000498466 C18orf15Q96N68 181 aa9.58□□□□□ -0.88
CCDC58-207ENST00000498466 PRRT1Q99946 306 aa9.58□□□□□ -0.88
CCDC58-207ENST00000498466 SRRM2Q9UQ35 2752 aaKnown RBP9.57□□□□□ -0.88
CCDC58-207ENST00000498466 A0A087WXM4 84 aa9.57□□□□□ -0.88
CCDC58-207ENST00000498466 SMR3BP02814 79 aaPredicted RBP9.57□□□□□ -0.88
CCDC58-207ENST00000498466 AKAIN1P0CW23 69 aa9.57□□□□□ -0.88
CCDC58-207ENST00000498466 RPL7P18124 248 aaKnown RBP9.57□□□□□ -0.88
CCDC58-207ENST00000498466 CXCL3P19876 107 aa9.57□□□□□ -0.88
CCDC58-207ENST00000498466 PSG3Q16557 428 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms