RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 DEFB125Q8N687 156 aa1.73□□□□□ -2.13
PTPRK-215ENST00000498284 PACRGLQ8N7B6 248 aa1.73□□□□□ -2.13
PTPRK-215ENST00000498284 CNEP1R1Q8N9A8 125 aa1.73□□□□□ -2.13
PTPRK-215ENST00000498284 OR4X2Q8NGF9 303 aa1.73□□□□□ -2.13
PTPRK-215ENST00000498284 TMA16Q96EY4 203 aaKnown RBP1.73□□□□□ -2.13
PTPRK-215ENST00000498284 IMP4Q96G21 291 aaKnown RBP1.73□□□□□ -2.13
PTPRK-215ENST00000498284 ANKRD36BP1Q96IX9 119 aa1.73□□□□□ -2.13
PTPRK-215ENST00000498284 DCSTAMPQ9H295 470 aa1.73□□□□□ -2.13
PTPRK-215ENST00000498284 TCEAL2Q9H3H9 227 aaPredicted RBP1.73□□□□□ -2.13
PTPRK-215ENST00000498284 TRABDQ9H4I3 376 aa1.73□□□□□ -2.13
PTPRK-215ENST00000498284 VPS29Q9UBQ0 182 aa1.73□□□□□ -2.13
PTPRK-215ENST00000498284 FBXO5Q9UKT4 447 aa1.73□□□□□ -2.13
PTPRK-215ENST00000498284 ARL2BPQ9Y2Y0 163 aa1.73□□□□□ -2.13
PTPRK-215ENST00000498284 RYR3Q15413 4870 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 H3BRN7 92 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 GNRH2O43555 120 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 IL3P08700 152 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 UCHL3P15374 230 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 MYL12AP19105 171 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 TAS2R30P59541 319 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 KRR1Q13601 381 aaKnown RBP1.72□□□□□ -2.13
PTPRK-215ENST00000498284 HIST3H3Q16695 136 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.72□□□□□ -2.13
PTPRK-215ENST00000498284 AGTRAPQ6RW13 159 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 SLC51BQ86UW2 128 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 SMIM20Q8N5G0 67 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 TBC1D19Q8N5T2 526 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 UBL4BQ8N7F7 174 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 FDCSPQ8NFU4 85 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 WFDC5Q8TCV5 224 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 SFRP2Q96HF1 295 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 DIRAS2Q96HU8 199 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 KLF6Q99612 283 aaPredicted RBP1.72□□□□□ -2.13
PTPRK-215ENST00000498284 SIGMAR1Q99720 223 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 SMR3AQ99954 134 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 ULBP3Q9BZM4 244 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 RNASE7Q9H1E1 156 aaKnown RBP1.72□□□□□ -2.13
PTPRK-215ENST00000498284 HES4Q9HCC6 221 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 C14orf105Q9NVL8 296 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 ARMC1Q9NVT9 282 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 NDUFB11Q9NX14 153 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 ANAPC10Q9UM13 185 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 ARL5AQ9Y689 179 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 TRRAPQ9Y4A5 3859 aa1.72□□□□□ -2.13
PTPRK-215ENST00000498284 ABCA1O95477 2261 aa1.71□□□□□ -2.13
PTPRK-215ENST00000498284 CCDC88CQ9P219 2028 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 PRKDCP78527 4128 aaKnown RBP1.71□□□□□ -2.14
PTPRK-215ENST00000498284 IGHV3-15A0A0B4J1V0 119 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 TLCD2A6NGC4 264 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 DISC1C4P0D8 188 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 EEF1E1-BLOC1S5C9J1V9 151 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 C19orf84I3L1E1 186 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 SPTBP11277 2137 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 XCL1P47992 114 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 TAS2R41P59536 307 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 KRTAP12-1P59990 96 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 RPS20P60866 119 aaKnown RBP1.71□□□□□ -2.14
PTPRK-215ENST00000498284 PSME3P61289 254 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 RPL19P84098 196 aaKnown RBP1.71□□□□□ -2.14
PTPRK-215ENST00000498284 PMAIP1Q13794 54 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 ACOT6Q3I5F7 207 aaPredicted RBP1.71□□□□□ -2.14
PTPRK-215ENST00000498284 TMEM97Q5BJF2 176 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 FAM201AQ5SY85 155 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 HIST2H3PS2Q5TEC6 136 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 LPCAT3Q6P1A2 487 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 Q6ZS92 163 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 SPATA12Q7Z6I5 190 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 TAC4Q86UU9 113 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 WFDC11Q8NEX6 87 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 LHFPL5Q8TAF8 219 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 TEX47Q8TBZ9 253 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 CT55Q8WUE5 264 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 FAM172AQ8WUF8 416 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 RNASE6Q93091 150 aaKnown RBP1.71□□□□□ -2.14
PTPRK-215ENST00000498284 RMND5BQ96G75 393 aaPredicted RBP1.71□□□□□ -2.14
PTPRK-215ENST00000498284 SLC35G5Q96KT7 338 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 NMNAT3Q96T66 252 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 PHB2Q99623 299 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 NIPSNAP1Q9BPW8 284 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 SS18L2Q9UHA2 77 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 SMPXQ9UHP9 88 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 TENM1Q9UKZ4 2725 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 DNAJC13O75165 2243 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 HEATR5AQ86XA9 2040 aa1.71□□□□□ -2.14
PTPRK-215ENST00000498284 DOCK4Q8N1I0 1966 aa1.7□□□□□ -2.14
PTPRK-215ENST00000498284 BIRC6Q9NR09 4857 aa1.7□□□□□ -2.14
PTPRK-215ENST00000498284 MPDZO75970 2070 aa1.7□□□□□ -2.14
PTPRK-215ENST00000498284 USF3Q68DE3 2245 aa1.7□□□□□ -2.14
PTPRK-215ENST00000498284 EXOC1LA0A1B0GW35 172 aa1.7□□□□□ -2.14
PTPRK-215ENST00000498284 OR4C46A6NHA9 309 aa1.7□□□□□ -2.14
PTPRK-215ENST00000498284 FAAHO00519 579 aa1.7□□□□□ -2.14
PTPRK-215ENST00000498284 BHLHE40O14503 412 aa1.7□□□□□ -2.14
PTPRK-215ENST00000498284 TXNDC9O14530 226 aa1.7□□□□□ -2.14
PTPRK-215ENST00000498284 NDUFB2O95178 105 aa1.7□□□□□ -2.14
PTPRK-215ENST00000498284 TNFP01375 233 aa1.7□□□□□ -2.14
PTPRK-215ENST00000498284 FGF6P10767 208 aa1.7□□□□□ -2.14
PTPRK-215ENST00000498284 SLCO1A2P46721 670 aa1.7□□□□□ -2.14
PTPRK-215ENST00000498284 RPL5P46777 297 aaKnown RBP1.7□□□□□ -2.14
PTPRK-215ENST00000498284 GABRA2P47869 451 aa1.7□□□□□ -2.14
PTPRK-215ENST00000498284 MARCKSL1P49006 195 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms