RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 HINT1P49773 126 aaPredicted RBP2.09□□□□□ -2.07
CALD1-224ENST00000498254 INSL3P51460 131 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 FOXA3P55318 350 aaPredicted RBP2.09□□□□□ -2.07
CALD1-224ENST00000498254 DAD1P61803 113 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 KLRD1Q13241 179 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 MRPL2Q5T653 305 aaKnown RBP2.09□□□□□ -2.07
CALD1-224ENST00000498254 Q6AWC8 147 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 SCGB1D4Q6XE38 83 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 Q6ZRU5 148 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 Q6ZUT4 128 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 ADM2Q7Z4H4 148 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 C3orf22Q8N5N4 141 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 WFDC11Q8NEX6 87 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 SGMS2Q8NHU3 365 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 GPX7Q96SL4 187 aaPredicted RBP2.09□□□□□ -2.07
CALD1-224ENST00000498254 TMEM191AQ9H0A3 160 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 C11orf68Q9H3H3 251 aaKnown RBP2.09□□□□□ -2.07
CALD1-224ENST00000498254 BANF2Q9H503 90 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 RPRMQ9NS64 109 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 UQCR10Q9UDW1 63 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 MARCOQ9UEW3 520 aaPredicted RBP2.09□□□□□ -2.07
CALD1-224ENST00000498254 COQ4Q9Y3A0 265 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 TPRKBQ9Y3C4 175 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 RNF11Q9Y3C5 154 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 MRPS16Q9Y3D3 137 aaKnown RBP2.09□□□□□ -2.07
CALD1-224ENST00000498254 LINC00312Q9Y6C7 94 aa2.09□□□□□ -2.07
CALD1-224ENST00000498254 NUP210LQ5VU65 1888 aa2.09□□□□□ -2.08
CALD1-224ENST00000498254 CACNA1DQ01668 2161 aa2.09□□□□□ -2.08
CALD1-224ENST00000498254 KIF1AQ12756 1690 aa2.09□□□□□ -2.08
CALD1-224ENST00000498254 TRPM3Q9HCF6 1732 aaPredicted RBP2.08□□□□□ -2.08
CALD1-224ENST00000498254 ARAP3Q8WWN8 1544 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 DUOX2Q9NRD8 1548 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 DOCK5Q9H7D0 1870 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 NRKQ7Z2Y5 1582 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 TRBV20-1A0A075B6N2 111 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 IGHV3-21A0A0B4J1V1 117 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 A0A0B4J2C4 111 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 MUC21A0A0G2JKD1 596 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 A0A1W2PNU3 283 aaPredicted RBP2.08□□□□□ -2.08
CALD1-224ENST00000498254 TMEM235A6NFC5 223 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 HIST1H2BKO60814 126 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 UBL3O95164 117 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 TNFP01375 233 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 HIST1H2BJP06899 126 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 P0DMU3 169 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 FAM231AP0DMU4 169 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 FAM231CP0DMU5 169 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 HIST1H2BOP23527 126 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 HIST1H2BBP33778 126 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 HIST1H2BDP58876 126 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 HIST1H2BCP62807 126 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 PLGLB1Q02325 96 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 HIST2H2BEQ16778 126 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 RTL8BQ17RB0 113 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.08□□□□□ -2.08
CALD1-224ENST00000498254 C9orf153Q5TBE3 101 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 OR2T2Q6IF00 324 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 Q6Q795 121 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 SPINT4Q6UDR6 99 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 HEPN1Q6WQI6 88 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 TMEM136Q6ZRR5 245 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 TRAPPC6BQ86SZ2 158 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 C10orf126Q8N4M7 172 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 C3orf56Q8N813 242 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 NUP35Q8NFH5 326 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 OR8A1Q8NGG7 326 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 OR5AK2Q8NH90 309 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 HIST1H2BHQ93079 126 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 DPH3Q96FX2 82 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 NMNAT3Q96T66 252 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 HIST1H2BNQ99877 126 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 HIST1H2BMQ99879 126 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 RTL8AQ9BWD3 113 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 MRPL32Q9BYC8 188 aaKnown RBP2.08□□□□□ -2.08
CALD1-224ENST00000498254 AICDAQ9GZX7 198 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 RERGLQ9H628 205 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 CCDC167Q9P0B6 97 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 NOP16Q9Y3C1 178 aaKnown RBP2.08□□□□□ -2.08
CALD1-224ENST00000498254 IQGAP3Q86VI3 1631 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 OTOFQ9HC10 1997 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 QRICH2Q9H0J4 1663 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 RIC1Q4ADV7 1423 aa2.08□□□□□ -2.08
CALD1-224ENST00000498254 NEO1Q92859 1461 aa2.07□□□□□ -2.08
CALD1-224ENST00000498254 MYH7BA7E2Y1 1941 aa2.07□□□□□ -2.08
CALD1-224ENST00000498254 DIP2BQ9P265 1576 aa2.07□□□□□ -2.08
CALD1-224ENST00000498254 TRBV19A0A075B6N1 114 aa2.07□□□□□ -2.08
CALD1-224ENST00000498254 IGKV1OR2-108A0A075B7D4 117 aa2.07□□□□□ -2.08
CALD1-224ENST00000498254 GRIFINA4D1Z8 144 aa2.07□□□□□ -2.08
CALD1-224ENST00000498254 A8MWP4 228 aa2.07□□□□□ -2.08
CALD1-224ENST00000498254 OOSP1A8MZH6 123 aa2.07□□□□□ -2.08
CALD1-224ENST00000498254 C4orf51C9J302 202 aa2.07□□□□□ -2.08
CALD1-224ENST00000498254 GEMIN2O14893 280 aaKnown RBP2.07□□□□□ -2.08
CALD1-224ENST00000498254 SFT2D2O95562 160 aa2.07□□□□□ -2.08
CALD1-224ENST00000498254 CYB5AP00167 134 aa2.07□□□□□ -2.08
CALD1-224ENST00000498254 IGKV1D-33P01593 117 aa2.07□□□□□ -2.08
CALD1-224ENST00000498254 IGKV1-33P01594 117 aa2.07□□□□□ -2.08
CALD1-224ENST00000498254 CGB3P0DN86 165 aa2.07□□□□□ -2.08
CALD1-224ENST00000498254 CGB7P0DN87 165 aa2.07□□□□□ -2.08
CALD1-224ENST00000498254 FABP2P12104 132 aa2.07□□□□□ -2.08
CALD1-224ENST00000498254 SLC25A6P12236 298 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms