RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 H3BUA1 57 aa15.3■□□□□ 0.04
ACTN4-208ENST00000497637 OR2C1O95371 312 aa15.3■□□□□ 0.04
ACTN4-208ENST00000497637 IGHV4-59P01825 116 aa15.3■□□□□ 0.04
ACTN4-208ENST00000497637 UBE2L3P68036 154 aaKnown RBP15.3■□□□□ 0.04
ACTN4-208ENST00000497637 C11orf52Q96A22 123 aa15.3■□□□□ 0.04
ACTN4-208ENST00000497637 FXYD5Q96DB9 178 aa15.3■□□□□ 0.04
ACTN4-208ENST00000497637 ATP6V0BQ99437 205 aa15.3■□□□□ 0.04
ACTN4-208ENST00000497637 CTSGP08311 255 aa15.29■□□□□ 0.04
ACTN4-208ENST00000497637 OR10J4P0C629 311 aa15.29■□□□□ 0.04
ACTN4-208ENST00000497637 BLCAPP62952 87 aa15.29■□□□□ 0.04
ACTN4-208ENST00000497637 KIAA0141Q14154 515 aaPredicted RBP15.29■□□□□ 0.04
ACTN4-208ENST00000497637 C15orf32Q32M92 178 aa15.29■□□□□ 0.04
ACTN4-208ENST00000497637 TMEM88Q6PEY1 159 aa15.29■□□□□ 0.04
ACTN4-208ENST00000497637 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.29■□□□□ 0.04
ACTN4-208ENST00000497637 EEF1AKMT3Q96AZ1 226 aa15.29■□□□□ 0.04
ACTN4-208ENST00000497637 RNF125Q96EQ8 232 aa15.29■□□□□ 0.04
ACTN4-208ENST00000497637 SLC25A39Q9BZJ4 359 aaPredicted RBP15.29■□□□□ 0.04
ACTN4-208ENST00000497637 TUBA4BQ9H853 241 aa15.29■□□□□ 0.04
ACTN4-208ENST00000497637 TMEM14CQ9P0S9 112 aa15.29■□□□□ 0.04
ACTN4-208ENST00000497637 A0A087WWC5 75 aa15.28■□□□□ 0.04
ACTN4-208ENST00000497637 FAM223BA6NKX1 122 aa15.28■□□□□ 0.04
ACTN4-208ENST00000497637 NUPL2O15504 423 aaKnown RBP15.28■□□□□ 0.04
ACTN4-208ENST00000497637 IGHV3-23P01764 117 aa15.28■□□□□ 0.04
ACTN4-208ENST00000497637 ATP5G2Q06055 141 aa15.28■□□□□ 0.04
ACTN4-208ENST00000497637 ZNF674Q2M3X9 581 aa15.28■□□□□ 0.04
ACTN4-208ENST00000497637 S100A7AQ86SG5 101 aa15.28■□□□□ 0.04
ACTN4-208ENST00000497637 CBLN2Q8IUK8 224 aa15.28■□□□□ 0.04
ACTN4-208ENST00000497637 FAM223AQ8IWN6 122 aa15.28■□□□□ 0.04
ACTN4-208ENST00000497637 WWC2-AS2Q96NR7 200 aa15.28■□□□□ 0.04
ACTN4-208ENST00000497637 SHANK2-AS3Q9BTD1 123 aa15.28■□□□□ 0.04
ACTN4-208ENST00000497637 COL7A1Q02388 2944 aa15.28■□□□□ 0.04
ACTN4-208ENST00000497637 TRBV7-1A0A0A6YYK4 115 aa15.27■□□□□ 0.04
ACTN4-208ENST00000497637 H3BRN7 92 aa15.27■□□□□ 0.04
ACTN4-208ENST00000497637 AP4M1O00189 453 aa15.27■□□□□ 0.04
ACTN4-208ENST00000497637 NDUFB4O95168 129 aa15.27■□□□□ 0.04
ACTN4-208ENST00000497637 PYYP10082 97 aa15.27■□□□□ 0.04
ACTN4-208ENST00000497637 PPIFP30405 207 aaKnown RBP15.27■□□□□ 0.04
ACTN4-208ENST00000497637 ZNF343Q6P1L6 599 aa15.27■□□□□ 0.04
ACTN4-208ENST00000497637 SCO2A0A1W2PP80 73 aa15.26■□□□□ 0.03
ACTN4-208ENST00000497637 OR2T8A6NH00 312 aa15.26■□□□□ 0.03
ACTN4-208ENST00000497637 IL4P05112 153 aa15.26■□□□□ 0.03
ACTN4-208ENST00000497637 ADMP35318 185 aa15.26■□□□□ 0.03
ACTN4-208ENST00000497637 AKR1C3P42330 323 aa15.26■□□□□ 0.03
ACTN4-208ENST00000497637 MS4A10Q96PG2 267 aa15.26■□□□□ 0.03
ACTN4-208ENST00000497637 LINC00527Q9UJ94 153 aa15.26■□□□□ 0.03
ACTN4-208ENST00000497637 GP9P14770 177 aa15.25■□□□□ 0.03
ACTN4-208ENST00000497637 ZNF600Q6ZNG1 722 aa15.25■□□□□ 0.03
ACTN4-208ENST00000497637 Q6ZS46 218 aa15.25■□□□□ 0.03
ACTN4-208ENST00000497637 CHRDL1Q9BU40 450 aa15.25■□□□□ 0.03
ACTN4-208ENST00000497637 VPREB3Q9UKI3 123 aa15.25■□□□□ 0.03
ACTN4-208ENST00000497637 GGTLC3B5MD39 225 aa15.24■□□□□ 0.03
ACTN4-208ENST00000497637 TRGV3P03979 118 aa15.24■□□□□ 0.03
ACTN4-208ENST00000497637 CLEC3BP05452 202 aa15.24■□□□□ 0.03
ACTN4-208ENST00000497637 HIST1H1EP10412 219 aaKnown RBP15.24■□□□□ 0.03
ACTN4-208ENST00000497637 RPL23P62829 140 aaKnown RBP15.24■□□□□ 0.03
ACTN4-208ENST00000497637 SUMO1P63165 101 aaKnown RBP15.24■□□□□ 0.03
ACTN4-208ENST00000497637 ZNF414Q96IQ9 312 aa15.24■□□□□ 0.03
ACTN4-208ENST00000497637 USMG5Q96IX5 58 aa15.24■□□□□ 0.03
ACTN4-208ENST00000497637 CCDC140Q96MF4 163 aa15.24■□□□□ 0.03
ACTN4-208ENST00000497637 C16orf95Q9H693 158 aa15.24■□□□□ 0.03
ACTN4-208ENST00000497637 BIRC6Q9NR09 4857 aa15.23■□□□□ 0.03
ACTN4-208ENST00000497637 NBEAP1P0C6P0 100 aa15.23■□□□□ 0.03
ACTN4-208ENST00000497637 S100A7P31151 101 aa15.23■□□□□ 0.03
ACTN4-208ENST00000497637 GPR183P32249 361 aa15.23■□□□□ 0.03
ACTN4-208ENST00000497637 MYCNOSP40205 109 aa15.23■□□□□ 0.03
ACTN4-208ENST00000497637 CFHR3Q02985 330 aa15.23■□□□□ 0.03
ACTN4-208ENST00000497637 USF2Q15853 346 aaPredicted RBP15.23■□□□□ 0.03
ACTN4-208ENST00000497637 NOL4LQ96MY1 436 aaPredicted RBP15.23■□□□□ 0.03
ACTN4-208ENST00000497637 TCEAL7Q9BRU2 100 aa15.23■□□□□ 0.03
ACTN4-208ENST00000497637 AURKAIP1Q9NWT8 199 aaPredicted RBP15.23■□□□□ 0.03
ACTN4-208ENST00000497637 RNF24Q9Y225 148 aa15.23■□□□□ 0.03
ACTN4-208ENST00000497637 PRELID1Q9Y255 219 aa15.23■□□□□ 0.03
ACTN4-208ENST00000497637 TSPAN4O14817 238 aa15.22■□□□□ 0.03
ACTN4-208ENST00000497637 IGLV1-40P01703 118 aa15.22■□□□□ 0.03
ACTN4-208ENST00000497637 CLEC19AQ6UXS0 136 aa15.22■□□□□ 0.03
ACTN4-208ENST00000497637 ZNF329Q86UD4 541 aa15.22■□□□□ 0.03
ACTN4-208ENST00000497637 C15orf54Q8N8G6 183 aa15.22■□□□□ 0.03
ACTN4-208ENST00000497637 TMEM190Q8WZ59 177 aa15.22■□□□□ 0.03
ACTN4-208ENST00000497637 ELOVL1Q9BW60 279 aa15.22■□□□□ 0.03
ACTN4-208ENST00000497637 CTDSP1Q9GZU7 261 aa15.22■□□□□ 0.03
ACTN4-208ENST00000497637 ZNF98A6NK75 572 aa15.21■□□□□ 0.03
ACTN4-208ENST00000497637 COLCA2A8K830 154 aa15.21■□□□□ 0.03
ACTN4-208ENST00000497637 TGOLN2O43493 480 aa15.21■□□□□ 0.03
ACTN4-208ENST00000497637 CRYBB3P26998 211 aa15.21■□□□□ 0.03
ACTN4-208ENST00000497637 ADIRFQ15847 76 aa15.21■□□□□ 0.03
ACTN4-208ENST00000497637 LEMD1Q68G75 181 aa15.21■□□□□ 0.03
ACTN4-208ENST00000497637 BPIFA4PQ86YQ2 179 aa15.21■□□□□ 0.03
ACTN4-208ENST00000497637 C2CD4CQ8TF44 421 aa15.21■□□□□ 0.03
ACTN4-208ENST00000497637 DERL1Q9BUN8 251 aa15.21■□□□□ 0.03
ACTN4-208ENST00000497637 TMEM242Q9NWH2 141 aa15.21■□□□□ 0.03
ACTN4-208ENST00000497637 LY96Q9Y6Y9 160 aa15.21■□□□□ 0.03
ACTN4-208ENST00000497637 CXorf65A6NEN9 183 aa15.2■□□□□ 0.02
ACTN4-208ENST00000497637 C9JCJ5 164 aa15.2■□□□□ 0.02
ACTN4-208ENST00000497637 TOMM20LQ6UXN7 152 aa15.2■□□□□ 0.02
ACTN4-208ENST00000497637 PRSS22Q9GZN4 317 aa15.2■□□□□ 0.02
ACTN4-208ENST00000497637 TMA7Q9Y2S6 64 aaKnown RBP15.2■□□□□ 0.02
ACTN4-208ENST00000497637 BMPR1BO00238 502 aa15.19■□□□□ 0.02
ACTN4-208ENST00000497637 MRPS12O15235 138 aaKnown RBP15.19■□□□□ 0.02
ACTN4-208ENST00000497637 MT-ND4LP03901 98 aa15.19■□□□□ 0.02
ACTN4-208ENST00000497637 TPPP2P59282 170 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms