RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 ABCA4P78363 2273 aa10.53□□□□□ -0.72
GAPVD1-220ENST00000497580 SMKR1H3BMG3 65 aa10.53□□□□□ -0.72
GAPVD1-220ENST00000497580 KIR2DS2P43631 304 aa10.53□□□□□ -0.72
GAPVD1-220ENST00000497580 ERHP84090 104 aaKnown RBP10.53□□□□□ -0.72
GAPVD1-220ENST00000497580 ABHD17AQ96GS6 310 aa10.52□□□□□ -0.73
GAPVD1-220ENST00000497580 CXXC4Q9H2H0 198 aa10.52□□□□□ -0.73
GAPVD1-220ENST00000497580 FAM169BQ8N8A8 192 aa10.52□□□□□ -0.73
GAPVD1-220ENST00000497580 SSUH2Q9Y2M2 353 aa10.52□□□□□ -0.73
GAPVD1-220ENST00000497580 SAA1P0DJI8 122 aaPredicted RBP10.51□□□□□ -0.73
GAPVD1-220ENST00000497580 SCGB1A1P11684 91 aa10.51□□□□□ -0.73
GAPVD1-220ENST00000497580 IL11RAQ14626 422 aa10.51□□□□□ -0.73
GAPVD1-220ENST00000497580 EXOC3-AS1Q8N2X6 119 aa10.51□□□□□ -0.73
GAPVD1-220ENST00000497580 Q9H3A6 140 aa10.51□□□□□ -0.73
GAPVD1-220ENST00000497580 MRPL36Q9P0J6 103 aaKnown RBP10.51□□□□□ -0.73
GAPVD1-220ENST00000497580 SMPXQ9UHP9 88 aa10.51□□□□□ -0.73
GAPVD1-220ENST00000497580 A0A1B0GWB2 263 aa10.51□□□□□ -0.73
GAPVD1-220ENST00000497580 RIGQ13278 110 aa10.51□□□□□ -0.73
GAPVD1-220ENST00000497580 HCP5Q6MZN7 132 aa10.51□□□□□ -0.73
GAPVD1-220ENST00000497580 PIP4P2Q8N4L2 257 aa10.51□□□□□ -0.73
GAPVD1-220ENST00000497580 UPK2O00526 184 aa10.51□□□□□ -0.73
GAPVD1-220ENST00000497580 DLL1O00548 723 aa10.51□□□□□ -0.73
GAPVD1-220ENST00000497580 CT45A6P0DMU7 189 aa10.51□□□□□ -0.73
GAPVD1-220ENST00000497580 CT45A5P0DMU8 189 aa10.51□□□□□ -0.73
GAPVD1-220ENST00000497580 CT45A7P0DMV0 189 aa10.51□□□□□ -0.73
GAPVD1-220ENST00000497580 SOX21Q9Y651 276 aaPredicted RBP10.51□□□□□ -0.73
GAPVD1-220ENST00000497580 PPP1R35Q8TAP8 253 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 IFI27L1Q96BM0 104 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 ZNF479Q96JC4 524 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 HARBI1Q96MB7 349 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 SPANXB1Q9NS25 103 aaPredicted RBP10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 IQCF6A8MYZ5 107 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 LOXL3P58215 753 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 AMN1Q8IY45 258 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 OR5AN1Q8NGI8 311 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 ZNF48Q96MX3 618 aaPredicted RBP10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 C20orf78Q9BR46 151 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 CHAC1Q9BUX1 264 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 PLSCR4Q9NRQ2 329 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 SIGLEC8Q9NYZ4 499 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 SMG1Q96Q15 3661 aaKnown RBP10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 ADAMTS20P59510 1910 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 E7EUB6 86 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 TCRAP04437 139 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 PRSS1P07477 247 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 DUX4L9Q6RFH8 374 aaPredicted RBP10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 GTSCR1Q86UQ5 136 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 DDB2Q92466 427 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 SS18L2Q9UHA2 77 aa10.5□□□□□ -0.73
GAPVD1-220ENST00000497580 IGKV1D-17A0A075B6S4 117 aa10.49□□□□□ -0.73
GAPVD1-220ENST00000497580 RPRMLQ8N4K4 120 aa10.49□□□□□ -0.73
GAPVD1-220ENST00000497580 PRELID3AQ96N28 172 aa10.49□□□□□ -0.73
GAPVD1-220ENST00000497580 IGKV2D-26A0A0A0MRZ7 120 aa10.49□□□□□ -0.73
GAPVD1-220ENST00000497580 TMEM213A2RRL7 107 aa10.49□□□□□ -0.73
GAPVD1-220ENST00000497580 C19orf67A6NJJ6 358 aa10.49□□□□□ -0.73
GAPVD1-220ENST00000497580 C2orf83Q53S99 150 aa10.49□□□□□ -0.73
GAPVD1-220ENST00000497580 SRSF8Q9BRL6 282 aaKnown RBP10.49□□□□□ -0.73
GAPVD1-220ENST00000497580 FAM90A1Q86YD7 464 aa10.49□□□□□ -0.73
GAPVD1-220ENST00000497580 PRSS22Q9GZN4 317 aa10.49□□□□□ -0.73
GAPVD1-220ENST00000497580 NPIPB6E9PJ23 425 aa10.48□□□□□ -0.73
GAPVD1-220ENST00000497580 MRAP2Q96G30 205 aa10.48□□□□□ -0.73
GAPVD1-220ENST00000497580 TTTY12Q9BZ98 90 aa10.48□□□□□ -0.73
GAPVD1-220ENST00000497580 ADGRG4Q8IZF6 3080 aa10.48□□□□□ -0.73
GAPVD1-220ENST00000497580 FMC1Q96HJ9 113 aa10.48□□□□□ -0.73
GAPVD1-220ENST00000497580 A0A096LNJ9 63 aa10.48□□□□□ -0.73
GAPVD1-220ENST00000497580 TCRBV4S1A1TA0A5B7 111 aa10.48□□□□□ -0.73
GAPVD1-220ENST00000497580 C19orf71A6NCJ1 209 aa10.48□□□□□ -0.73
GAPVD1-220ENST00000497580 LYZP61626 148 aa10.48□□□□□ -0.73
GAPVD1-220ENST00000497580 C6orf15Q6UXA7 325 aaPredicted RBP10.48□□□□□ -0.73
GAPVD1-220ENST00000497580 ZNF714Q96N38 554 aa10.48□□□□□ -0.73
GAPVD1-220ENST00000497580 MLST8Q9BVC4 326 aa10.48□□□□□ -0.73
GAPVD1-220ENST00000497580 HBDP02042 147 aa10.47□□□□□ -0.73
GAPVD1-220ENST00000497580 LGALS9BQ3B8N2 356 aa10.47□□□□□ -0.73
GAPVD1-220ENST00000497580 LGALS9CQ6DKI2 356 aa10.47□□□□□ -0.73
GAPVD1-220ENST00000497580 MOGAT3Q86VF5 341 aa10.47□□□□□ -0.73
GAPVD1-220ENST00000497580 HAX1O00165 279 aa10.47□□□□□ -0.73
GAPVD1-220ENST00000497580 GATA3P23771 443 aa10.47□□□□□ -0.73
GAPVD1-220ENST00000497580 GAGE13Q4V321 117 aa10.47□□□□□ -0.73
GAPVD1-220ENST00000497580 AGRNO00468 2067 aa10.47□□□□□ -0.73
GAPVD1-220ENST00000497580 K7ESF4 209 aa10.47□□□□□ -0.73
GAPVD1-220ENST00000497580 SPINK8P0C7L1 97 aa10.47□□□□□ -0.73
GAPVD1-220ENST00000497580 KIR2DL2P43627 348 aaPredicted RBP10.47□□□□□ -0.73
GAPVD1-220ENST00000497580 Q86TA4 180 aa10.47□□□□□ -0.73
GAPVD1-220ENST00000497580 TDHQ8IZJ6 230 aa10.47□□□□□ -0.73
GAPVD1-220ENST00000497580 PRR7Q8TB68 274 aa10.47□□□□□ -0.73
GAPVD1-220ENST00000497580 TNRC6BQ9UPQ9 1833 aaKnown RBP10.46□□□□□ -0.73
GAPVD1-220ENST00000497580 BDP1A6H8Y1 2624 aa10.46□□□□□ -0.73
GAPVD1-220ENST00000497580 SYT8Q8NBV8 401 aa10.46□□□□□ -0.73
GAPVD1-220ENST00000497580 OR1L8Q8NGR8 309 aa10.46□□□□□ -0.73
GAPVD1-220ENST00000497580 PRR33A8MZF0 331 aa10.46□□□□□ -0.74
GAPVD1-220ENST00000497580 SPRY3O43610 288 aa10.46□□□□□ -0.74
GAPVD1-220ENST00000497580 APOMO95445 188 aa10.46□□□□□ -0.74
GAPVD1-220ENST00000497580 CKS2P33552 79 aa10.46□□□□□ -0.74
GAPVD1-220ENST00000497580 CT83Q5H943 113 aa10.46□□□□□ -0.74
GAPVD1-220ENST00000497580 RUSC1-AS1Q66K80 236 aa10.46□□□□□ -0.74
GAPVD1-220ENST00000497580 TACC2O95359 2948 aa10.46□□□□□ -0.74
GAPVD1-220ENST00000497580 PTPRBP23467 1997 aa10.45□□□□□ -0.74
GAPVD1-220ENST00000497580 MEOX1P50221 254 aa10.45□□□□□ -0.74
GAPVD1-220ENST00000497580 KALRNO60229 2985 aa10.45□□□□□ -0.74
GAPVD1-220ENST00000497580 ZFHX2Q9C0A1 2572 aaPredicted RBP10.45□□□□□ -0.74
GAPVD1-220ENST00000497580 WT1-ASQ06250 92 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms